LOC110500124 (itih5)


Basic Information

Item Value
gene id LOC110500124
gene name itih5
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 25891873 ~ 25907486 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036957445.1
TCAGTCATCCATCGTCTCACAAATTGGGTCATTCTGATCCGAACGACCCGCAGACTCAGTGCGCTGCACCCTGGAAAAATGCGATCATATTCGTTATTACTGTAAATGGATATGGACGTCAACATGCTGTTTTTGACTTTACTGATGTGTTACAATCCGTATGTTTTTGGACAGTTTGAGGATATTAACATTGAGGAGGATCTTTCTCCTGACTTGACCGACTTTGATTTGGATATTTCTCCCCGTAGAGTGCCTCGCCAGGTGAAATCCATGCTTATTAAGGAGACCAAACCGCATATCCAGGAGCTGTCGGTGAAGACCATCATTATCTCCCGATACGCCTTCACGGCGGTGTCGTGCACCATGCTCAACCGGCACTCCGCCGCCGCCGAGGGCGTCTTCCAGTTCCTGATTCCCAAGAACGCCTATGTCTCGAACTTTACCATGATCATTGGGGGGCGTGTCTACCCCAGTGAGGTCAGGCCCAAGGAGAAGAAGGTCAAACAGGGGAAGGGCGGTGAGGCCAAACCCAAGAACAAGGAGGCAGGTGAACAGAGTAGCGAACCAGAGGTGTTCAGGATGGGGGCCAGTATCCCAGGTCGTAACCGGGCCATGTTCATGCTGACCTATGAGGAGCTGCTCCAGCGGAGGCTGGGGAGGTATGAGCATGTGACCAGCCTGAGACCCCTGCAGCTGGTCAGCCGTCTCAGTGTGGACGTCACCATTGTGGATCACTCCACCATCACCCACCTGGAGGTGCTGCCACTGCGCAACGGCAAGAGCAACACGGCAGTAGCCAGTGGTGCCAGTGCAGCGAAGACACCTGCCAAGCCTGCTCTTCCTGTTTCCACGGTGATCAAACAAAATAAGACGTTCTGTAGGATCACCTTCAGCCCCAACATCGTTCAGCAGGCTAAGATCACCACCAGCGGCATGCTGGGAGAGTTTGTGGTGCACTATGACgtggagagagagctggggatagGAGACATACAGgTTCTGAACGGCCATTTTGTGCACTACTTCGCCCCCAAGGATCTGCCGGTGGTGCCCAAGAACGTGGTGTTCGTGATCGACACCAGCGCCTCTATGCTGGGCACCAAGATCAGACAGactaAGGATGCCCTGTTCACTATCCTGAGGGACCTGCGTCCAGGCGACCGGTTTAACTTTGTCAGCTTCTCCAACCGTATCAAGGTGTGGCAGCCCAACCGCCTGGTCCCCGTCACGCCTCTCAACGTCCGAGACGCCAAGAAGTTCATCTATATGCTCCAACCCACTGgagGCACTGACATCAACGGTGGCATACAGACGGGCTCCTCATTGCTAAGCGGCTATCTGAACGCCGACCCAGACGCCAACCACAACAGTGTGTCTCTCATCATCTTCCTGACAGACGGGCGGCCCACGGTGGGCGAGCTGCAGTCTCCCAGCATCCTCAGCAACGCGCGGGCGGCAGTGAAGGAGCAGTTCTGCGTGTTCACCATCGGGATGGGGAACGATGTGGACTACAGGCTTCTGGAACGCATGGCCCTGGAGAACTGTGGGATGATGAGGAGGATACATGAGGATTCAGACGCcagcaccatgctcaaagggTTTTATGATGAGATAGGCACTCCACTGCTCTCTGACATCAGGGTGAATTACACAGAGGACTCGGTCCAGTACGTCACCCAGCACCTCTTCACCAACTATTTCAACGGCTCAGAGATCGTCATCGCCGGCAAATTGACCAATCAAAGTGCAGACTCCCTGCACGTCCAGGTCACCGCCAGCAACAGCGACAAGAGCATCGTCCTGGAGACAGACGTGGCGTTACGGCAAAGGGAGGTGGAGACGGAGAGGCATGTGAAGGAGGCGGCGGCCGGGGTGGGGTCAGGGGTTACAGGGGCGGGCACGACAGGGTCAGTGGCGGATGATTTCGTGGAGCGTGTATGGGGTTTCCTGAGTGTGAAGGAGGGGCTGAGGTCCAGGCTGAAGAGCCAGaccagtagggagagagagggacataccCAGCAGGTGACTAACCTCTCCCTGACATACCACTTCCTCACGCCCCTCACCTCCCTGGTGGTGGAAAAACCTCAGGTGCTGGCCGACGGAACCATGGCCGAGGATACACCCACCCCCACCCCTGTACCCACAGAGACAAATAAGAAGGCTGTTTCAGCCAATGAGCTGTCGGATGAGATGGAAGGGGAGGAAGACACAGCCCAGAGCCTGCACTTGAAGAAAGACCAGCCGGGTGGACAGAGTTCCACAGTTACCAAGACAACGGGTAAAGTTTTGAAGAGGCCAGCCCAAAAATCCATAACCATCTCCAAAACATCAGCGGACGGCGATCCCCACTTTGTGGTTGAGTTCCCCCTCAgtaaactgactgtgtgtttcAACATCAACGGAGAGCCAGGACACATTCTCAGAATGGTATCTGACCACAAGCACTCTGGTGTGACAGTAAACGGTAAGCTGATAGGCGCCCCGGCACCAGCGGGCAGCCACAAACAGCACAGGACATACTTCAGCACCATTACCATCGTGGTGAACCGACCCAAACGTTCCTACATCGAGGTCACCCCCAAGAAGGTCATTCTGGATGGACGTGACCGCCTGGTCCTGCCCTGCGACACCACAGTCTCCGTGGAGAGTGGCGGGCTTGCGGTGACGATAGTGGGAAAGTCCACCGTGACCGTAACCATAGGAGGAACCATTTGTTTCGTCATACTGGTGCATCAGTACAAGAACCCTGCTCCCTATCAGAGAAACCACCTGGGATTTTACATCTCCAACAGCAAAGGGCTGTCACATGACTGTCATGGACTACTGGGTCAGTTTCTGTATGAGGAAGTGGGACTCGCAGAGCTTCCTGGCAATGTCATGGCAACAGGAGACAACAGCACGTCTGCACGGTCACCCATCCTGAAGGTCAAAGGGCGTTCAGTGCCGGTGGTCCAGAAGACCCGGCGTATCTACAGCGGACGTCAGAGCGTGGACTGCTGGTTCGCCAGGAACAACGCAGCCAAGCTGATCGACGGACAGTATGAAGATTATGTGGTGTCACACCTATTCGACACAGGCGATTGGCCCCACGGAAGTAACGGAGCCTGAGACAGGGGCCAATAAGGAGCCAGCAATGAACTTGTCCCGCGCACACAGAAACTATAACCCCAGGTACAGCTATAGTAGCCAACAGGCTCTTTTCATACCCTCTGATGCTAAACCTCTAAATCAGCTTTCTTTTTGACCCACATACTCACACTCCAAACACTACTCAACTACCCATAGTCACATAGAAGACTCATCTTTCGATCTGTGCCAAATACAGTTggagtcggaggtttacatacactaatgttggagtcattaaaactcgtttttcaaccactccacaaatttcttgttaacaaactacagttttggcaagttggttgggacatctactt
>XM_036957447.1
TCAGTCATCCATCGTCTCACAAATTGGGTCATTCTGATCCGAACGACCCGCAGACTCAGTGCGCTGCACCCTGGAAAAATGCGATCATATTCGTTATTACTGTAAATGGATATGGACGTCAACATGCTGTTTTTGACTTTACTGATGTGTTACAATCCGTATGTTTTTGGACAGTTTGAGGATATTAACATTGAGGAGGATCTTTCTCCTGACTTGACCGACTTTGATTTGGATATTTCTCCCCGTAGAGTGCCTCGCCAGGTGAAATCCATGCTTATTAAGGAGACCAAACCGCATATCCAGGAGCTGTCGGTGAAGACCATCATTATCTCCCGATACGCCTTCACGGCGGTGTCGTGCACCATGCTCAACCGGCACTCCGCCGCCGCCGAGGGCGTCTTCCAGTTCCTGATTCCCAAGAACGCCTATGTCTCGAACTTTACCATGATCATTGGGGGGCGTGTCTACCCCAGTGAGGTCAGGCCCAAGGAGAAGAAGGTCAAACAGGGGAAGGGCGGTGAGGCCAAACCCAAGAACAAGGAGGCAGGTGAACAGAGCGAACCAGAGGTGTTCAGGATGGGGGCCAGTATCCCAGGTCGTAACCGGGCCATGTTCATGCTGACCTATGAGGAGCTGCTCCAGCGGAGGCTGGGGAGGTATGAGCATGTGACCAGCCTGAGACCCCTGCAGCTGGTCAGCCGTCTCAGTGTGGACGTCACCATTGTGGATCACTCCACCATCACCCACCTGGAGGTGCTGCCACTGCGCAACGGCAAGAGCAACACGGCAGTAGCCAGTGGTGCCAGTGCAGCGAAGACACCTGCCAAGCCTGCTCTTCCTGTTTCCACGGTGATCAAACAAAATAAGACGTTCTGTAGGATCACCTTCAGCCCCAACATCGTTCAGCAGGCTAAGATCACCACCAGCGGCATGCTGGGAGAGTTTGTGGTGCACTATGACgtggagagagagctggggatagGAGACATACAGgTTCTGAACGGCCATTTTGTGCACTACTTCGCCCCCAAGGATCTGCCGGTGGTGCCCAAGAACGTGGTGTTCGTGATCGACACCAGCGCCTCTATGCTGGGCACCAAGATCAGACAGactaAGGATGCCCTGTTCACTATCCTGAGGGACCTGCGTCCAGGCGACCGGTTTAACTTTGTCAGCTTCTCCAACCGTATCAAGGTGTGGCAGCCCAACCGCCTGGTCCCCGTCACGCCTCTCAACGTCCGAGACGCCAAGAAGTTCATCTATATGCTCCAACCCACTGgagGCACTGACATCAACGGTGGCATACAGACGGGCTCCTCATTGCTAAGCGGCTATCTGAACGCCGACCCAGACGCCAACCACAACAGTGTGTCTCTCATCATCTTCCTGACAGACGGGCGGCCCACGGTGGGCGAGCTGCAGTCTCCCAGCATCCTCAGCAACGCGCGGGCGGCAGTGAAGGAGCAGTTCTGCGTGTTCACCATCGGGATGGGGAACGATGTGGACTACAGGCTTCTGGAACGCATGGCCCTGGAGAACTGTGGGATGATGAGGAGGATACATGAGGATTCAGACGCcagcaccatgctcaaagggTTTTATGATGAGATAGGCACTCCACTGCTCTCTGACATCAGGGTGAATTACACAGAGGACTCGGTCCAGTACGTCACCCAGCACCTCTTCACCAACTATTTCAACGGCTCAGAGATCGTCATCGCCGGCAAATTGACCAATCAAAGTGCAGACTCCCTGCACGTCCAGGTCACCGCCAGCAACAGCGACAAGAGCATCGTCCTGGAGACAGACGTGGCGTTACGGCAAAGGGAGGTGGAGACGGAGAGGCATGTGAAGGAGGCGGCGGCCGGGGTGGGGTCAGGGGTTACAGGGGCGGGCACGACAGGGTCAGTGGCGGATGATTTCGTGGAGCGTGTATGGGGTTTCCTGAGTGTGAAGGAGGGGCTGAGGTCCAGGCTGAAGAGCCAGaccagtagggagagagagggacataccCAGCAGGTGACTAACCTCTCCCTGACATACCACTTCCTCACGCCCCTCACCTCCCTGGTGGTGGAAAAACCTCAGGTGCTGGCCGACGGAACCATGGCCGAGGATACACCCACCCCCACCCCTGTACCCACAGAGACAAATAAGAAGGCTGTTTCAGCCAATGAGCTGTCGGATGAGATGGAAGGGGAGGAAGACACAGCCCAGAGCCTGCACTTGAAGAAAGACCAGCCGGGTGGACAGAGTTCCACAGTTACCAAGACAACGGGTAAAGTTTTGAAGAGGCCAGCCCAAAAATCCATAACCATCTCCAAAACATCAGCGGACGGCGATCCCCACTTTGTGGTTGAGTTCCCCCTCAgtaaactgactgtgtgtttcAACATCAACGGAGAGCCAGGACACATTCTCAGAATGGTATCTGACCACAAGCACTCTGGTGTGACAGTAAACGGTAAGCTGATAGGCGCCCCGGCACCAGCGGGCAGCCACAAACAGCACAGGACATACTTCAGCACCATTACCATCGTGGTGAACCGACCCAAACGTTCCTACATCGAGGTCACCCCCAAGAAGGTCATTCTGGATGGACGTGACCGCCTGGTCCTGCCCTGCGACACCACAGTCTCCGTGGAGAGTGGCGGGCTTGCGGTGACGATAGTGGGAAAGTCCACCGTGACCGTAACCATAGGAGGAACCATTTGTTTCGTCATACTGGTGCATCAGTACAAGAACCCTGCTCCCTATCAGAGAAACCACCTGGGATTTTACATCTCCAACAGCAAAGGGCTGTCACATGACTGTCATGGACTACTGGGTCAGTTTCTGTATGAGGAAGTGGGACTCGCAGAGCTTCCTGGCAATGTCATGGCAACAGGAGACAACAGCACGTCTGCACGGTCACCCATCCTGAAGGTCAAAGGGCGTTCAGTGCCGGTGGTCCAGAAGACCCGGCGTATCTACAGCGGACGTCAGAGCGTGGACTGCTGGTTCGCCAGGAACAACGCAGCCAAGCTGATCGACGGACAGTATGAAGATTATGTGGTGTCACACCTATTCGACACAGGCGATTGGCCCCACGGAAGTAACGGAGCCTGAGACAGGGGCCAATAAGGAGCCAGCAATGAACTTGTCCCGCGCACACAGAAACTATAACCCCAGGTACAGCTATAGTAGCCAACAGGCTCTTTTCATACCCTCTGATGCTAAACCTCTAAATCAGCTTTCTTTTTGACCCACATACTCACACTCCAAACACTACTCAACTACCCATAGTCACATAGAAGACTCATCTTTCGATCTGTGCCAAATACAGTTggagtcggaggtttacatacactaatgttggagtcattaaaactcgtttttcaaccactccacaaatttcttgttaacaaactacagttttggcaagttggttgggacatctactt

Function

symbol description
itih5 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within hyaluronan metabolic process and negative regulation of peptidase activity. Predicted to be located in extracellular region. Orthologous to human ITIH5 (inter-alpha-trypsin inhibitor heavy chain 5).

NR:

description
inter-alpha-trypsin inhibitor heavy chain H5-like

GO: NA

KEGG:

id description
K24515 ITIH5; inter-alpha-trypsin inhibitor heavy chain H5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036957445.1 False 3446 mRNA 0.54 14 25891873 25907486
XM_036957447.1 True 3443 mRNA 0.54 14 25891873 25907486

Neighbor

gene id symbol gene type direction distance location
LOC110500127 LOC106576199 coding upstream 16032 25871821 ~ 25875841 (+)
LOC110500123 NA coding upstream 118992 25768886 ~ 25772881 (+)
LOC110500118 LOC106609342 coding upstream 1100306 24787480 ~ 24791567 (+)
LOC110500114 LOC106576221 coding upstream 1146989 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding upstream 1168188 24720968 ~ 24723685 (+)
sfmbt2 LOC106576194 coding downstream 24104 25931590 ~ 25977279 (+)
LOC110500131 prkcq coding downstream 80616 25988102 ~ 26012328 (+)
il15ra LOC100136332 coding downstream 156330 26063816 ~ 26121228 (+)
cdc123 LOC106576189 coding downstream 230605 26138091 ~ 26147264 (+)
camk1da LOC106576188 coding downstream 241269 26148755 ~ 26217898 (+)
G1721010 LOC106576198 non-coding upstream 7066 25876916 ~ 25884807 (+)
G1721011 atp5c1 non-coding upstream 23829 25866596 ~ 25868044 (+)
G1721016 NA non-coding upstream 32445 25859228 ~ 25859428 (+)
G1721005 NA non-coding upstream 43410 25848133 ~ 25848463 (+)
G1721004 NA non-coding upstream 45043 25846603 ~ 25846830 (+)
G1721050 NA non-coding downstream 67076 25974562 ~ 25975664 (+)
G1721087 pfkfb3 non-coding downstream 134422 26041908 ~ 26043103 (+)
G1721125 NA non-coding downstream 198455 26105941 ~ 26106170 (+)
G1721126 NA non-coding downstream 199293 26106779 ~ 26107037 (+)
G1720853 NA other upstream 255284 25636335 ~ 25636589 (+)
G1720836 NA other upstream 279605 25611816 ~ 25612268 (+)
LOC110500097 LOC106576231 other upstream 1574335 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 1597076 24277797 ~ 24294858 (+)
G1719268 NA other upstream 1755550 24135764 ~ 24136323 (+)
G1721084 pfkfb3 other downstream 130816 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 422288 26324744 ~ 26333964 (+)
G1722079 NA other downstream 914161 26821647 ~ 26821935 (+)
LOC110501048 LOC106609163 other downstream 2415034 28311018 ~ 28335924 (+)
LOC110500183 LOC106609180 other downstream 2434015 28341423 ~ 28343734 (+)

Expression


Co-expression Network