LOC110500131 (prkcq)


Basic Information

Item Value
gene id LOC110500131
gene name prkcq
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 25988102 ~ 26012328 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036957449.1
TCGCGTGATAACCTACCCCTGGTTTTCGGGAATTTTCCTACCCAATTATAAACTGATCGACGGGGTATGTTCCTACAAACACTGGTAGTAAATAGGACGAGCCTGAGTGGGGGGAGTTCAGGATCTGAAAAGACTCTGAAAAGATTTTTTGGGATATTCAACCATAGATGCACAACGATTGATTCCGCATTGCGGAAATCCATTCCAGCATACCTGTGTTTTGCACACCTGTAATACCACTTCACTCCACCGGGGGGCATCATTGAATTCTTCATTAATTAATCCGATTTATAGTAAAGGGGCGTTACCTTGATTTCTGCGGTGGTGCTGCTTTTGGTAAAATAGAGGTGCATTTATTCTGATCATTGGTGCCTCCACAAGGCTACTTCGACACAGTTATTACAAAACTCTGAAGCAGCAAGATGGACATTAGCTTCAAATGAACCGCAACACCAAAGCAGTTCTGTTTTGTAGTTTGACTTTTAAAGGCACCAACTTGTCAGAGAATCAATCTTCTCCTTTGAAAATACACCAGAGACTTCAAAAGGAGgGTGACGGACAGCTCTTATCAGTACCAGAGGAGCGAGGCGTCAAGGGCGGAACTGCCGCTGTGAGCCAAAGagccctactctcctctctctccctctctctctccctccctcgccaaCCCATCTCTCATCAGGAGGAAAAGGCCAGTCAGTGTGAGGGGGACTGTGTCACAGAGGGGGCTGACATCCACACAAAGACCCCTCTCCCCAAGAGAAGGGCTAACTGAAGCACAACTCTTCACTGTGAGGATCGCTGTTTCCGTGACGAGGGAGGTTCTCTGAAGGTTTTCTGGAGGTTGTGTGACCATTGAGTTGAGGTTTTTGTCTGGAGGTCAGCGAGTGAGTGGTACCTGCAGCCATGTCTCCGTTCCTGCGTATCGGCTTCTCCAGCTTCGAGATGGACCCAGGTCTGGCCTACCATGAAGAGATGATCAACCCGTATTGTGCTGTCTACATGAAGGAGGCTATAGACACAGAGAAGGGCCAGGTGTACAAGCAGAAGAAGCCCACCATGTACCCCCCCTGGAGCAGCACGTTTGACGCCCATGTCCACCGGGGGCGTGTCATGCACGTGGTGGTGAAGGATAAAGCCGAGCTAAAGTCTGAAGCCATCGTGCAGCTGGACACCCTGGCCTCACGCTGCAAAAAGGAGAACGGCAAGCTGGAGATCTGGgTGGAGCTGAAGCCACAGGGTCGTCTACTCATGGAGGCCAGATACTACTTGGAGAAGAGTGACGCCACAGGTTCAGGTGAGGGAGATGgatttggagagagagacagggatccAGGAGTCTTTGCCCTCCACGCACGACGCGGAGCCATCAAACAGGCCAAGATCCATGAGGTCAAATGTCACGAGTTCAGCGCCACTTTCTTCCCCCAGCCCACCTTCTGCTCCGTCTGTAAAGAGTTTGTCTGGGGTCTGAATAAGCAGGGTTATCAGTGTCGACAGTGCAACGCAGCCATCCACAAGAAATGCATTGACAAAATCATCGCCAAGTGCACTGGGTCGGCCATCAACAGCAAAGAGACCATGATCCACAAGGAGCGCTTTAAGATCGACATGCCCCACAGGTTTAAGGTGTACAACTACAAGAGCCCCACGTTCTGTGAACACTGTGGCACGCTGCTGTGGGGGCTGGCCAAGCAGGGACTCAAGtgtgaggAGTGCGGTATGAACGTTCATCACAAGTGCCAGAAAAAGGTGGCCAACCTGTGTGGAGTCAACCAGAAACTGATGGCTGAAGCCCTGGCCACGATCGAGACTAAACAGCAGGCCAGGGGCTCCAGAGAGAGTGAGATCTATAGTCGAGGCGGGCCGGGGGGTGTGGGCCAGGCAGGGGTGGTGCGGGAACCTTCAGGTTTAGTAGCAGGTCTCCCCCCGACCGCAGCCACCGCTGGGCGAAAAGagCAGCAGGGGATATCGTGGGACACCCCAGCGGAAGGGGACATGCCTGCCCCTGTGATGGAGGAGCCTGAGACGCTGTACGCCGTCCCCAGAAAAGAACACCTTCACAAGTTCACCCTGGACAACTTCATCCTACACAAGATGCTTGGCAAAGGCAGCTTCGGCAAGGTGTTCTTGGCCGAGCTGAAGAGCACCAGAGAGTTCTTTGCGGTGAAGGCTCTGAAGAAGGACGTGGTTCTGCTGGATGATGATGTGGAGTGTACCATGGTGGAGAGGAGAGTCCTCTCCCTGGCCTGGGAACATCCCTTCCTCACACACCTCCACTGCACCTTCCAGaccacggagaACCTGTTCTTTGTGATGGAGTATCTGAACGGAGGTGACCTCATGTTCCACATCCAGAACTGTCACAAGTTTGACGTGCAGAGATCTACGTTCTATGCTGCTGAGATTATCTGTGGGCTCCAGTTCCTCCACTCCAAAGGCATTGTCTATAGGGATCTGAAGCTGGACAACGTGTTGCTAGACTCTGAAGGCCATATAAAGATAGCAGACTTTGGGATGTGTAAGGAGAACATGGAGGGAGAAACGCGGACCTGCACCTTCTGTGGAACACCAGATTACATCGCCCCAGAGATTCTGCTGGGGCAGAAGTACGGCAGCTCAGTGGACTGGTGGTCGTTCGGGGTCTTGCTGTACGAGATGCTGATTGGACAGTCTCCATTCCATGGTCGCGATGAGGAGGAACTGTTCCAGTCCATCAGGACAGATGACCCCTGTTACCCCCAATGGCTGGCCAAGGACGCACGAGACATCCTCATCAAGCTGTTTGTGAGGGAGCCGGAGAGGAGGCTGGGTGTGAAGGGGAACATCCGTCAACACTCCTTCTTCAAAGACACAGACTGGAGCGCTCTGGAGAAACGAGAGGTGGCGCCGCCCTTCAGGCCATCTGTGAAATCCCCCAGTGACGTCAGTAACTTTGACAAGGAGTTTATCAATGAGAAACCCATGTTGTCGTGTGCAGATCGTACCCTCATGAACAGTGTGGACCAAACCATGTTTAGCAACTTCTCCTTCGTCAACCCAGCTGTGGGCCACATCAAAGGCCCCTGACCTGTGATAACCTTACAACAACCTACCAGAAACATATTCACAATCCATCAACAACCCACTGTACCAGCAACATATTCACAACCCATCTATTACCTTCGGACAACCCATTCACAACGCATCAATTACTCATTACGACAACACATCGCGGACAGGAGTCAAGGACACTTACCTAACAGATCAATAACATATCCACAACCAGTCAATAACACCTCAGCTCTTTTATACAGCCACGGtgtacagcagtggaggctgctgaggggaggacggctcataataatggccagaacagagcaaatggaatggtatcaaacacatggaaaccatgtgtttgatgtatttgataccattccactgattccactccagtcattaccacgagcccatcctccccaattaaggtgccaccaacctcctgtggtgtacaGACTACTTTAGGAGTCACTACCCGATTGCCCAGATTGTGTGGAATACTGAGAATGTTGTATTGTACTCATAACCTGTTATTCAATAGTGTCTGTTTTATCCCTGCACATAAGTGTCTGTTCAATCTACTTTAACCATTTACTGAGACATTTTCTATTTAATTCtgagtgtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcag
>XM_036957450.1
TCGCGTGATAACCTACCCCTGGTTTTCGGGAATTTTCCTACCCAATTATAAACTGATCGACGGGGTATGTTCCTACAAACACTGGTAGTAAATAGGACGAGCCTGAGTGGGGGGAGTTCAGGATCTGAAAAGACTCTGAAAAGATTTTTTGGGATATTCAACCATAGATGCACAACGATTGATTCCGCATTGCGGAAATCCATTCCAGCATACCTGTGTTTTGCACACCTGTAATACCACTTCACTCCACCGGGGGGCATCATTGAATTCTTCATTAATTAATCCGATTTATAGTAAAGGGGCGTTACCTTGATTTCTGCGGTGGTGCTGCTTTTGGTAAAATAGAGGTGCATTTATTCTGATCATTGGTGCCTCCACAAGGCTACTTCGACACAGTTATTACAAAACTCTGAAGCAGCAAGATGGACATTAGCTTCAAATGAACCGCAACACCAAAGCAGTTCTGTTTTGTAGTTTGACTTTTAAAGGTAGGCATACATTTATTCCATTATACCTATTTCTCATTTGCATATTGACACATTTCCAGCCTGTAATGGAAGAACATTGTGTATTACTGGCTATGCCTATTTATTTGGATTAATTGGGTTATTTTGATCATTCCACTAGTCTGAAATATAGGTTTACTGCATAAATTAAAAGACGATTTCAATTTGAAATCCTGATTGGCATGCACTTATAACCTTCCCACCCAGGCACCAACTTGTCAGAGAATCAATCTTCTCCTTTGAAAATACACCAGAGACTTCAAAAGGAGgGTGACGGACAGCTCTTATCAGTACCAGAGGAGCGAGGCGTCAAGGGCGGAACTGCCGCTGTGAGCCAAAGagccctactctcctctctctccctctctctctccctccctcgccaaCCCATCTCTCATCAGGAGGAAAAGGCCAGTCAGTGTGAGGGGGACTGTGTCACAGAGGGGGCTGACATCCACACAAAGACCCCTCTCCCCAAGAGAAGGGCTAACTGAAGCACAACTCTTCACTGTGAGGATCGCTGTTTCCGTGACGAGGGAGGTTCTCTGAAGGTTTTCTGGAGGTTGTGTGACCATTGAGTTGAGGTTTTTGTCTGGAGGTCAGCGAGTGAGTGGTACCTGCAGCCATGTCTCCGTTCCTGCGTATCGGCTTCTCCAGCTTCGAGATGGACCCAGGTCTGGCCTACCATGAAGAGATGATCAACCCGTATTGTGCTGTCTACATGAAGGAGGCTATAGACACAGAGAAGGGCCAGGTGTACAAGCAGAAGAAGCCCACCATGTACCCCCCCTGGAGCAGCACGTTTGACGCCCATGTCCACCGGGGGCGTGTCATGCACGTGGTGGTGAAGGATAAAGCCGAGCTAAAGTCTGAAGCCATCGTGCAGCTGGACACCCTGGCCTCACGCTGCAAAAAGGAGAACGGCAAGCTGGAGATCTGGgTGGAGCTGAAGCCACAGGGTCGTCTACTCATGGAGGCCAGATACTACTTGGAGAAGAGTGACGCCACAGGTTCAGGTGAGGGAGATGgatttggagagagagacagggatccAGGAGTCTTTGCCCTCCACGCACGACGCGGAGCCATCAAACAGGCCAAGATCCATGAGGTCAAATGTCACGAGTTCAGCGCCACTTTCTTCCCCCAGCCCACCTTCTGCTCCGTCTGTAAAGAGTTTGTCTGGGGTCTGAATAAGCAGGGTTATCAGTGTCGACAGTGCAACGCAGCCATCCACAAGAAATGCATTGACAAAATCATCGCCAAGTGCACTGGGTCGGCCATCAACAGCAAAGAGACCATGATCCACAAGGAGCGCTTTAAGATCGACATGCCCCACAGGTTTAAGGTGTACAACTACAAGAGCCCCACGTTCTGTGAACACTGTGGCACGCTGCTGTGGGGGCTGGCCAAGCAGGGACTCAAGtgtgaggAGTGCGGTATGAACGTTCATCACAAGTGCCAGAAAAAGGTGGCCAACCTGTGTGGAGTCAACCAGAAACTGATGGCTGAAGCCCTGGCCACGATCGAGACTAAACAGCAGGCCAGGGGCTCCAGAGAGAGTGAGATCTATAGTCGAGGCGGGCCGGGGGGTGTGGGCCAGGCAGGGGTGGTGCGGGAACCTTCAGGTTTAGTAGCAGGTCTCCCCCCGACCGCAGCCACCGCTGGGCGAAAAGagCAGCAGGGGATATCGTGGGACACCCCAGCGGAAGGGGACATGCCTGCCCCTGTGATGGAGGAGCCTGAGACGCTGTACGCCGTCCCCAGAAAAGAACACCTTCACAAGTTCACCCTGGACAACTTCATCCTACACAAGATGCTTGGCAAAGGCAGCTTCGGCAAGGTGTTCTTGGCCGAGCTGAAGAGCACCAGAGAGTTCTTTGCGGTGAAGGCTCTGAAGAAGGACGTGGTTCTGCTGGATGATGATGTGGAGTGTACCATGGTGGAGAGGAGAGTCCTCTCCCTGGCCTGGGAACATCCCTTCCTCACACACCTCCACTGCACCTTCCAGaccacggagaACCTGTTCTTTGTGATGGAGTATCTGAACGGAGGTGACCTCATGTTCCACATCCAGAACTGTCACAAGTTTGACGTGCAGAGATCTACGTTCTATGCTGCTGAGATTATCTGTGGGCTCCAGTTCCTCCACTCCAAAGGCATTGTCTATAGGGATCTGAAGCTGGACAACGTGTTGCTAGACTCTGAAGGCCATATAAAGATAGCAGACTTTGGGATGTGTAAGGAGAACATGGAGGGAGAAACGCGGACCTGCACCTTCTGTGGAACACCAGATTACATCGCCCCAGAGATTCTGCTGGGGCAGAAGTACGGCAGCTCAGTGGACTGGTGGTCGTTCGGGGTCTTGCTGTACGAGATGCTGATTGGACAGTCTCCATTCCATGGTCGCGATGAGGAGGAACTGTTCCAGTCCATCAGGACAGATGACCCCTGTTACCCCCAATGGCTGGCCAAGGACGCACGAGACATCCTCATCAAGCTGTTTGTGAGGGAGCCGGAGAGGAGGCTGGGTGTGAAGGGGAACATCCGTCAACACTCCTTCTTCAAAGACACAGACTGGAGCGCTCTGGAGAAACGAGAGGTGGCGCCGCCCTTCAGGCCATCTGTGAAATCCCCCAGTGACGTCAGTAACTTTGACAAGGAGTTTATCAATGAGAAACCCATGTTGTCGTGTGCAGATCGTACCCTCATGAACAGTGTGGACCAAACCATGTTTAGCAACTTCTCCTTCGTCAACCCAGCTGTGGGCCACATCAAAGGCCCCTGACCTGTGATAACCTTACAACAACCTACCAGAAACATATTCACAATCCATCAACAACCCACTGTACCAGCAACATATTCACAACCCATCTATTACCTTCGGACAACCCATTCACAACGCATCAATTACTCATTACGACAACACATCGCGGACAGGAGTCAAGGACACTTACCTAACAGATCAATAACATATCCACAACCAGTCAATAACACCTCAGCTCTTTTATACAGCCACGGtgtacagcagtggaggctgctgaggggaggacggctcataataatggccagaacagagcaaatggaatggtatcaaacacatggaaaccatgtgtttgatgtatttgataccattccactgattccactccagtcattaccacgagcccatcctccccaattaaggtgccaccaacctcctgtggtgtacaGACTACTTTAGGAGTCACTACCCGATTGCCCAGATTGTGTGGAATACTGAGAATGTTGTATTGTACTCATAACCTGTTATTCAATAGTGTCTGTTTTATCCCTGCACATAAGTGTCTGTTCAATCTACTTTAACCATTTACTGAGACATTTTCTATTTAATTCtgagtgtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcag

Function

symbol description
prkcq Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Located in immunological synapse. Is expressed in Mauthner neurons; brain; somite border; and spinal cord. Orthologous to human PRKCQ (protein kinase C theta).

NR:

description
PREDICTED: protein kinase C theta type

GO: NA

KEGG:

id description
K18052 PRKCQ; novel protein kinase C theta type

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036957449.1 False 3723 mRNA 0.51 18 25988102 26012328
XM_036957450.1 True 3948 mRNA 0.50 17 25988102 26012328

Neighbor

gene id symbol gene type direction distance location
sfmbt2 LOC106576194 coding upstream 10823 25931590 ~ 25977279 (+)
LOC110500124 itih5 coding upstream 80616 25891873 ~ 25907486 (+)
LOC110500127 LOC106576199 coding upstream 112261 25871821 ~ 25875841 (+)
LOC110500123 NA coding upstream 215221 25768886 ~ 25772881 (+)
LOC110500118 LOC106609342 coding upstream 1196535 24787480 ~ 24791567 (+)
il15ra LOC100136332 coding downstream 51488 26063816 ~ 26121228 (+)
cdc123 LOC106576189 coding downstream 125763 26138091 ~ 26147264 (+)
camk1da LOC106576188 coding downstream 136427 26148755 ~ 26217898 (+)
LOC110500144 optn coding downstream 216648 26228976 ~ 26237213 (+)
mcm10 mcm10 coding downstream 225681 26238009 ~ 26247743 (+)
G1721050 NA non-coding upstream 12438 25974562 ~ 25975664 (+)
G1721010 LOC106576198 non-coding upstream 103295 25876916 ~ 25884807 (+)
G1721011 atp5c1 non-coding upstream 120058 25866596 ~ 25868044 (+)
G1721016 NA non-coding upstream 128674 25859228 ~ 25859428 (+)
G1721005 NA non-coding upstream 139639 25848133 ~ 25848463 (+)
G1721087 pfkfb3 non-coding downstream 29580 26041908 ~ 26043103 (+)
G1721125 NA non-coding downstream 93613 26105941 ~ 26106170 (+)
G1721126 NA non-coding downstream 94451 26106779 ~ 26107037 (+)
G1721128 NA non-coding downstream 95531 26107859 ~ 26126990 (+)
G1720853 NA other upstream 351513 25636335 ~ 25636589 (+)
G1720836 NA other upstream 375834 25611816 ~ 25612268 (+)
LOC110500097 LOC106576231 other upstream 1670564 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 1693305 24277797 ~ 24294858 (+)
G1719268 NA other upstream 1851779 24135764 ~ 24136323 (+)
G1721084 pfkfb3 other downstream 25974 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 317446 26324744 ~ 26333964 (+)
G1722079 NA other downstream 809319 26821647 ~ 26821935 (+)
LOC110501048 LOC106609163 other downstream 2310192 28311018 ~ 28335924 (+)
LOC110500183 LOC106609180 other downstream 2329173 28341423 ~ 28343734 (+)

Expression


Co-expression Network