LOC118942919


Basic Information

Item Value
gene id LOC118942919
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 31464252 ~ 31465847 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036957654.1
AGACAGCGTCCCCGTGTCGCCGAAAAATGCAACAGGTGTCACAGAGCAGAGGACTGCCGTTTCAAAGACGAAATTTGTCACAAATGCAGTAGAAGGGGGGCACATTCAAAGAGCATGCAAAGCAAAATTCAGTCACAAAAGGAAAACTGAGAAAATTAAAGGGTCTGTGAATGCACTAGCAGAGAACAGTGGCAGTGATTCAGATGAACGATTAATTGGTACAATGGAGTTAAACACAGTGACTTCTCCCAGCAGTAGCATAATATGGGTGGCACCAGATATCGAAGGCAAACCCCTCAAAATGGAGCTGGACACAGGATCTGCAGTGTCTATAATTTTCACTACCGTCTACAATGAGCACTTCAAGGCTATCAAGCTGAAGAACACAAATGTGTTGGTGAAGACCTACTCAGGAGAGAGATTGAGCCCATTGGGGGCGTTGCAGGTCAGAGTGCGTTATGGGGGGCAAACACAGCAGTTACAGCTGTATGTGGTGCCTGGAACTGGCCCCCCATTATTTGGCAGGGAATGGCTTTAAAAAATAAAGCTGAACTGGTGTGACTTGAATATGCTCCACACGTTCCAGTCCAAAGAGAATGGTACAGACCAAACACTGGAACACTTGCAGAAGAAATACAACACAGTCTTCAGTGATCAGATGGGAACAGTAAAAGGCTTCACAGCAAAACTTGTACTAAGAGATGACGCAACCCCGAAATTCTGCAAAGCCAGATCTGTTCCATACTCCCTGAGACCAAAGGTGGAAGCGGAAATCGATCGCTTGCAGGATACAGGGGTCCTGATGAAAGTGGACAGAAGCGAATGGGCCACACCCATAGTTCCAATTGTGAAGAAAGACGGGTCTGTTAGAATGTGTGGGGACTTCAAGGTAACTGTGAATTCAATGTTGCATGTGGACCAACACCCCCTACCACGTCTGGATGACATCTTTGCTGCACTAGCTGGTGGGAAACACTTCAGTAAAATCGATCTGAAACAGGCTCACCTGCAGCTACCGGTTGAAGAGAGCTCCAAACAGTACctgacaataaacacacacaaaggtcTATACAGGTATAACCGCCTGGTTTTTGGCATTGCATCAGCTCCAGCCATTTGGCAACAAACTATTGACCAGATTTTGCAAGGAATCCCAGGATCCCAGTGTATCCTGGATGACATGATCACAACAGGACGCACCGAAAAAGAGCACCTGGCTAACCTGGAAGAGGTCCTGAAAAGACTGAAAGAGTATGGTCTACAGGCAAACTTACAGAAGTGTGAGTTCTTCAAAGACAAGATTGTCTTCTGTGGACATGAAATTGACTGCATTGGATTGcacaaaacacaggacaaaatCAAGGCAGTGGTACGACCACAAACGACCACAAAATATCACAGAAGTGAGATCTTTCACGGGACTGATCAATTACTACAGAAGATTCCTCCCAAACCTTTCAGCAGTACTCCAGCCTCTAAATCAGCTCCTGGAAAAGAATAGGACATGGCAGTGGACAGAGCAGTGTGAAAATGCATTTCTGGAGGCAAAACGGCTCATAACATCTGAACATGCCCTGATGCATCACGACCCTGAAA

Function

NR:

description
uncharacterized protein K02A2.6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036957654.1 True 1596 mRNA 0.46 1 31464252 31465847

Neighbor

gene id symbol gene type direction distance location
LOC110500239 LOC106609244 coding upstream 27413 31427827 ~ 31436839 (+)
trnaa-ugc-149 NA coding upstream 360040 31104142 ~ 31104212 (+)
LOC110500235 LOC106609242 coding upstream 398601 31046030 ~ 31065651 (+)
LOC110500233 LOC106609239 coding upstream 466302 30990205 ~ 30997950 (+)
LOC110500229 LOC106609237 coding upstream 481503 30942609 ~ 30982749 (+)
LOC110500240 LOC106609248 coding downstream 27615 31493462 ~ 31497830 (+)
tmem168a LOC106609249 coding downstream 102548 31568395 ~ 31589029 (+)
LOC110500245 LOC106609252 coding downstream 215093 31680940 ~ 31684896 (+)
LOC110500244 LOC106609251 coding downstream 219560 31685407 ~ 31736831 (+)
LOC110500247 LOC106609254 coding downstream 279926 31745773 ~ 31800121 (+)
G1727148 NA non-coding upstream 1001 31457024 ~ 31463251 (+)
G1727147 NA non-coding upstream 7845 31456169 ~ 31456407 (+)
G1727143 NA non-coding upstream 16177 31447849 ~ 31448075 (+)
G1727084 NA non-coding upstream 143372 31320279 ~ 31320880 (+)
G1727055 NA non-coding upstream 176072 31287977 ~ 31288180 (+)
G1727154 NA non-coding downstream 1338 31467185 ~ 31467721 (+)
G1727156 NA non-coding downstream 5672 31471519 ~ 31471810 (+)
G1727158 NA non-coding downstream 8048 31473895 ~ 31474128 (+)
G1727165 NA non-coding downstream 16156 31482003 ~ 31482283 (+)
G1727138 NA non-coding downstream 25669 31491516 ~ 31492308 (+)
G1727146 NA other upstream 14135 31449396 ~ 31450117 (+)
G1726863 NA other upstream 323162 31140597 ~ 31141090 (+)
LOC110500226 LOC106576059 other upstream 580639 30881776 ~ 30889293 (+)
G1726222 NA other upstream 852891 30605300 ~ 30611361 (+)
G1726209 LOC106609221 other upstream 873616 30582002 ~ 30590636 (+)
G1727181 NA other downstream 42209 31508056 ~ 31508372 (+)
G1727220 NA other downstream 98288 31564135 ~ 31564594 (+)
LOC110501063 LOC106609150 other downstream 648889 32114413 ~ 32144886 (+)
LOC110500252 LOC106609149 other downstream 692065 32153116 ~ 32162456 (+)
G1729465 NA other downstream 1855606 33321453 ~ 33321761 (+)

Expression


Co-expression Network