LOC110501065 (LOC106609145)


Basic Information

Item Value
gene id LOC110501065
gene name LOC106609145
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 32189542 ~ 32217794 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036957662.1
gcgtgtgtgtgtgtgtgtgtgtactgtagcctaTGTGAACATGCTGTGTGGGAGGAGTCTGTACTTGGCTGTTCCCTGACCTTGGACGAGAAAAGCGTCTGGatgtgagagagcgagaaagacagacTTGGAGAGTTTGGTATCAACATAATGAACAGCACACTATAAGGAAGGGAGGGGGACAGACCGAGACCATGGGGGCTGCGGTATAGACTACTGCAGTGCAGGTTTGTGGGTTGTTGTTTCTGTGGCTGAAGAGAGATTTTACATTCGAATTCTGAGAGACACCTGGCAACCCGTAGCTGAGCTGGAGAGTGATAATGTCTGTACAGGCCAGACGACAACACAGCATACAGCAGCCAATGAAAGAGCCTGGAACAGGAAGCTGAGATGGAGTTCCCAGAGTTCCCAGGGTGCCCTGCTGCTGCCGGCGTTGCCGTGGGCGACGAGGCGGAGAAGGAGGGCCATGCCCAGGTTCTATTTGATGAGTTTGTCCAGGCGTCTACCTGCAGAACGACACTCCGTGCCTTCAACCTGCTGTGTGAGCACcttcagctcacacacacacacacacagccacagacaTACTCCCCGACGCAGCCGCAGAGGCCTTTCTACCACAGCCTCAAAGAACGCCTCAGCTACTGGAAGGCAAACGCACTGTGGGCCAAACTGGACAAACGGGCGGCCCACCACGAATACGGGAAGGGCCGTGTCTGTGCCAACACCACGTGTGTGATCATCGGGGCGGGGCCGTGTGGTCTGCGTACAGCAGTAGAGCTGGGGTTCCTGGGGGCCAGAGTGGTGCTGCTGGAGAAGAGAGATGCCTTCTCCAGAAACAACGTCCTTCACCTCTGGCCTTTCACCATCCACGACCTCAGGGGCCTCGGGGCCAAGAAGTTCTACGGCAAGTTCTGTGCTGGAGCCATTGACCACATCAGTATACGGCAGTTACAGTTGGTGTTATTAAAGGTGGCTCTGTTGCTGGGGGTGGAAGTCCATGTCAACGTAGAGTTCAAGGGACTGGTGGAGCCACCAGTGGACCAGGAGCAACAGAagGTAGGCTGGAGGGTGGAGGTGAAACCCAAGTCTCACCCTATTAACCAACTGCAGTGTGACGTGGTGATCGGAGCTGATGGACGACGGAACACACTGCCAGGGTTCAGGCGTAAGGAGTTCCGTGGCAAGCTGGCCATTGCCATCACAGCTAACTTCATGAACCGTAACACCACGGCTGAGGCCAAGGTGGAGGAGATCAGCGGAGTggccttcatctttaaccagagGTTCTTTCAGGAGCTACGGGACACCACAGGAGTGGACCTGGAGAATATAGTGTACTACAAGGACGACACACACTACTTTGTGATGACGGCTAAGAAGCAGAGTCTGCTGGAGAAAGGAGTCATTCTGCGGGACTATGCAGACACAGAAACACTTCTCTCACGGGGAAACGTGGACCAGAATGCGCTGCTGGCCTACGCCCGCGAGGCGGCGGACTTCTCCACCAATCACCAGCTGCCGTCCCTGGACTTTGCCATGAACCACTACGGGCAGCCTGATGTTGCCTTGTTTGACTTCACCTGTATGTACGCGTCGGAGAACGCTGCATTGgtcagacagagacatggacaccATCTACTGGTCACGCTGGTGGGAGACAGCCTtctggagccgtTCTGGCCCATGGGGACAGGTATAGCACGGGGGTTCCTGGCAGCATTGGATTCTGCCTGGATGGTACGGAGCTGGGCTCAAGGCCTCGCCCCCCTGGACGTACTTGCTGAAAGAGAAAGTCTGTATCGTCTCCTTCCTCAGGCCTCTCCAGAAAATGTCAACAAGAACTATGGTCAATACACTGTAGACCCAGCTACCCGCTACCCTAACATCAACCACCAACTCATCACCCCCGCACAGGTGGGGCATCTAATATACACAGAAGAGAGTGGAGGTTCGGGTGCGGACCAGGAACCACGACACCGATCCCCCTTGCCGAAGCTACTACGACAGGAGTCCTTCTCTCGCTCCAGTAAGCTTTTGTCATGGTGCCAGCAGCAGACACAGGGTTACCGTGGCGTTGTGGTTAGCGACCTCACTACTTCCTGGAAGAGTGGCCTAGCTTTGTGTGCCCTCATCCACCACTACCGACCTGACCTCATTGACTTTGACTCTCTAAaggaggatgagggggaggagaataTGAGGTTGGGGTTGGAGGTGGCAGAGAAGGAGTTTGGCATCTCTCCTGTGATGACTGTCGAGGAGATGTCGTCTGTCAGTGAAACGGACACTCTCTGTATGGTCATGTACCTCAGCCAGTTTCACCAGCTCTTCAAGGACGCACTGCCCCCAAGCGAATCCCAGACCGAGAGCCTAGATGGGAGGGCTGCTGTGATTGGTcctgcctctctcctcagccGCCTGGGCCACAGCCCATCCCGCAAGCGCAACCCCAAGGAGCAGAAGGAGAAGGATGCggtggggaagaggaggaagaccagTCGGCCATGTCTGGAGGATGTGAGACAAGATCTCAGATTAGTGGACAGTTATGAGGAAGAGGCTGCCTTGTGCTCTGTGGGTGGAGCAAGCCAGAGCAGAGTGCGCTCGATGGCCAATCAGCTGCTGGCCAAGTTTGAGGAGAATGCCCCTTGCCCCTCCTCCACGCCAGCTGCAGCTCTCCgcagacagAAATACGTTCAGATGTACACCGGGGGAGTAAGCTCATTGGCTGAACAGATATCCTGTCAGCTTCAAAGTCAGGAGTCACCGTCACCCCAGCACACTCCTGATAGGAAGGAATCAgctGGCGTTCACTCTGTGTTGGCGGGGCCAGGGCCAGGGCCGGGGCCAGGAGGTGCCAGTGACGTGTGTTTCTTCTGCAGTAGGCGTGTGTACGTGATGGAAAGACTCAGTGCTGAGGGACTGTTCTTCCACCGGAGCTGCTTCCAGTGTGACCACTGCAGCTCCACCCTTCGCCTGGCCTCTTACGCCTACGACCGACCTAacgGGAAGTTCTACTGTAAGCCGCACTATGACCTCCGTCTGGTTGGGCCGGTCCAGAGGAAGAGACCAGCTCCTCCTACCTCTGACCAGCACCCAACCCCCTACGAACGGACCCCCTCTCAGCAGACCCTCCTGGAGTCCCCAGCTGCTCTGTCCACTAACCCTCGCTCCTCAGTAACTGTGGTGACAGCAGATCGCAGGTCCTCAGtggcGTCTCTGATTGGGAGTGGGTCCGGCTTGGTAAAGCttctatgtgtatgtgtgtgtgtgtatgtgtgcgtgtgtgcactcAGTGGCATCTCTGATTGAGAGGGAGTGTGGCTTGGCTAAGCGCGTGCGCGGCACGCCAGAACGTATAGAGCTGGAGAACTACCGTGGGAGCCTGGGGAGCCTGGAGACTGAGCAGCTAACAGATGAGCCGGAGGAGGTGCCAGAGGA
>XM_036957661.1
gtgtactgtagcctaTGTGAACATGCTGTGTGGGAGGAGTCTGTACTTGGCTGTTCCCTGACCTTGGACGAGAAAAGCGTCTGGatgtgagagagcgagaaagacagacTTGGAGAGTTTGGTATCAACATAATGAACAGCACACTATAAGGAAGGGAGGGGGACAGACCGAGACCATGGGGGCTGCGGTATAGACTACTGCAGTGCAGGTTTGTGGGTTGTTGTTTCTGTGGCTGAAGAGAGATTTTACATTCGAATTCTGAGAGACACCTGGCAACCCGTAGCTGAGCTGGAGAGTGATAATGTCTGTACAGGCCAGACGACAACACAGCATACAGCAGCCAATGAAAGAGCCTGGAACAGGAAGCTGAGATGGAGTTCCCAGAGTTCCCAGGGTGCCCTGCTGCTGCCGGCGTTGCCGTGGGCGACGAGGCGGAGAAGGAGGGCCATGCCCAGGTTCTATTTGATGAGTTTGTCCAGGCGTCTACCTGCAGAACGACACTCCGTGCCTTCAACCTGCTGTGTGAGCACcttcagctcacacacacacacacacagccacagacaTACTCCCCGACGCAGCCGCAGAGGCCTTTCTACCACAGCCTCAAAGAACGCCTCAGCTACTGGAAGGCAAACGCACTGTGGGCCAAACTGGACAAACGGGCGGCCCACCACGAATACGGGAAGGGCCGTGTCTGTGCCAACACCACGTGTGTGATCATCGGGGCGGGGCCGTGTGGTCTGCGTACAGCAGTAGAGCTGGGGTTCCTGGGGGCCAGAGTGGTGCTGCTGGAGAAGAGAGATGCCTTCTCCAGAAACAACGTCCTTCACCTCTGGCCTTTCACCATCCACGACCTCAGGGGCCTCGGGGCCAAGAAGTTCTACGGCAAGTTCTGTGCTGGAGCCATTGACCACATCAGTATACGGCAGTTACAGTTGGTGTTATTAAAGGTGGCTCTGTTGCTGGGGGTGGAAGTCCATGTCAACGTAGAGTTCAAGGGACTGGTGGAGCCACCAGTGGACCAGGAGCAACAGAagGTAGGCTGGAGGGTGGAGGTGAAACCCAAGTCTCACCCTATTAACCAACTGCAGTGTGACGTGGTGATCGGAGCTGATGGACGACGGAACACACTGCCAGGGTTCAGGCGTAAGGAGTTCCGTGGCAAGCTGGCCATTGCCATCACAGCTAACTTCATGAACCGTAACACCACGGCTGAGGCCAAGGTGGAGGAGATCAGCGGAGTggccttcatctttaaccagagGTTCTTTCAGGAGCTACGGGACACCACAGGAGTGGACCTGGAGAATATAGTGTACTACAAGGACGACACACACTACTTTGTGATGACGGCTAAGAAGCAGAGTCTGCTGGAGAAAGGAGTCATTCTGCGGGACTATGCAGACACAGAAACACTTCTCTCACGGGGAAACGTGGACCAGAATGCGCTGCTGGCCTACGCCCGCGAGGCGGCGGACTTCTCCACCAATCACCAGCTGCCGTCCCTGGACTTTGCCATGAACCACTACGGGCAGCCTGATGTTGCCTTGTTTGACTTCACCTGTATGTACGCGTCGGAGAACGCTGCATTGgtcagacagagacatggacaccATCTACTGGTCACGCTGGTGGGAGACAGCCTtctggagccgtTCTGGCCCATGGGGACAGGTATAGCACGGGGGTTCCTGGCAGCATTGGATTCTGCCTGGATGGTACGGAGCTGGGCTCAAGGCCTCGCCCCCCTGGACGTACTTGCTGAAAGAGAAAGTCTGTATCGTCTCCTTCCTCAGGCCTCTCCAGAAAATGTCAACAAGAACTATGGTCAATACACTGTAGACCCAGCTACCCGCTACCCTAACATCAACCACCAACTCATCACCCCCGCACAGGTGGGGCATCTAATATACACAGAAGAGAGTGGAGGTTCGGGTGCGGACCAGGAACCACGACACCGATCCCCCTTGCCGAAGCTACTACGACAGGAGTCCTTCTCTCGCTCCAGTAAGCTTTTGTCATGGTGCCAGCAGCAGACACAGGGTTACCGTGGCGTTGTGGTTAGCGACCTCACTACTTCCTGGAAGAGTGGCCTAGCTTTGTGTGCCCTCATCCACCACTACCGACCTGACCTCATTGACTTTGACTCTCTAAaggaggatgagggggaggagaataTGAGGTTGGGGTTGGAGGTGGCAGAGAAGGAGTTTGGCATCTCTCCTGTGATGACTGTCGAGGAGATGTCGTCTGTCAGTGAAACGGACACTCTCTGTATGGTCATGTACCTCAGCCAGTTTCACCAGCTCTTCAAGGACGCACTGCCCCCAAGCGAATCCCAGACCGAGAGCCTAGATGGGAGGGCTGCTGTGATTGGTcctgcctctctcctcagccGCCTGGGCCACAGCCCATCCCGCAAGCGCAACCCCAAGGAGCAGAAGGAGAAGGATGCggtggggaagaggaggaagaccagTCGGCCATGTCTGGAGGATGTGAGACAAGATCTCAGATTAGTGGACAGTTATGAGGAAGAGGCTGCCTTGTGCTCTGTGGGTGGAGCAAGCCAGAGCAGAGTGCGCTCGATGGCCAATCAGCTGCTGGCCAAGTTTGAGGAGAATGCCCCTTGCCCCTCCTCCACGCCAGCTGCAGCTCTCCgcagacagAAATACGTTCAGATGTACACCGGGGGAGTAAGCTCATTGGCTGAACAGATATCCTGTCAGCTTCAAAGTCAGGAGTCACCGTCACCCCAGCACACTCCTGATAGGAAGGAATCAgctGGCGTTCACTCTGTGTTGGCGGGGCCAGGGCCAGGGCCGGGGCCAGGAGGTGCCAGTGACGTGTGTTTCTTCTGCAGTAGGCGTGTGTACGTGATGGAAAGACTCAGTGCTGAGGGACTGTTCTTCCACCGGAGCTGCTTCCAGTGTGACCACTGCAGCTCCACCCTTCGCCTGGCCTCTTACGCCTACGACCGACCTAacgGGAAGTTCTACTGTAAGCCGCACTATGACCTCCGTCTGGTTGGGCCGGTCCAGAGGAAGAGACCAGCTCCTCCTACCTCTGACCAGCACCCAACCCCCTACGAACGGACCCCCTCTCAGCAGACCCTCCTGGAGTCCCCAGCTGCTCTGTCCACTAACCCTCGCTCCTCAGTAACTGTGGTGACAGCAGATCGCAGGTCCTCAGTGGCATCTCTGATTGAGAGGGAGTGTGGCTTGGCTAAGCGCGTGCGCGGCACGCCAGAACGTATAGAGCTGGAGAACTACCGTGGGAGCCTGGGGAGCCTGGAGACTGAGCAGCTAACAGATGAGCCGGAGGAGGTGCCAGAGGAGACGCTGGCCAATTACAACCTCAGTCTGCTGGTGACAGAGGTGAAGAAGGCCAATCACAAGCGCATCTTGTTGCGGGAAAACGAGGGCTCCAGTTCAGAATCAGAgacggaggaggagggagagaggcagcggGCTCTAACCAATGACCTGGCTAGAGACTCATGGAGGAAGGCCATGGAACTACACGCACGCCtccgaggagagagaggagatgacgaagaagagacagaagaaggagaggaggaaggagaggttgatgaagatgatgatgatgatgaggaggagttaTCTAGTGATGgggaaGGAGCATCTCCACTCACCACTGAGGAGGTAGCCTCGTTGGACGCGTGGCAGCAGAGCACACACTCTccagacacatacacacctgacacacacacgcatggcaCAAACACGCCTGACACGCActctccagacacacacacgcctgaCATACAACTGCCTGACTCGACAACACCCGACACACACGGTGCACACAGCCCCACCAGTGTACCCAATATCACCTTCTCCACTCCGGCCACTGCCTCAACACCCTTCACACCCACACCTTTAACGTCGCATGCACCCACACCCACGTCCTCAGTGTCAATTCCAGACTCCTCTGTCTTTACCTACTCCTCCCCcaactcctccaccacctctgGCTGCTCCCCGGGTCCagacgagggagaggaggatggggagaagaaagagatgaaggagagaaaagagcgagaggagagggagagaggggggaaggagagggagagggtgcgTGACTCCAGCAGTAGTTCGGGGATCGGTGTGGGCGGGAGCTCCACCACCTCTACCTCGGACCCTCTCACCCCTCCCGGCATCCCCCCCCCTGCCCAGCTCAAGGCATGCTGGGATAGCCTGCCCCACCCTTCTGTAGAGGCAGAGTCACTGCAAAGCCCCACCTCTCGCCCTGCCCCTCGATTTGCCCCCGCACCTATCATGGCGTCGGCTGTTGTGCGGGGGTTCGGGGGCAAGAAGCTGAAACCGTGGGACGTGGATGGGGGAAGGGGATTTGTTGCGGGGGGGTCTGTTGGGGCAGGGTCTCTTGGGGAGAAGCTGTGTAAGGGTGTAGTAATAGACCCCTTAGAGGACATCAACCCCCCCTTGTCCCCCCTGAAGCCCCTTAAGGCAGTGcccagagacgagagagagatcgggaggaagagggagatggagaggaggagggagatagagagagcagcCATGGGAGTGGGCTGGGAGGACACGAAAATCCCCCTAGGAAGGGACCCTCTCCCAAGGAAGAGCAGAGGTGGTCTAGACCCCCGCAGACTCACAGAGAGcttgccccccctcctcctcacacaACTCCAGGGGGGCTCCCTCTTCCCTTCACGTAAGTGCTGCAGGGACAACCAGCCCCCCAGCCAGAGTGTGTCTGAAGCGGGCATAGGAGAGGGTGGACCCCTGGGCCTGTGGAGAGCTGTCATCTCTGGCTATAAGAGGGACAGGAAGAAGAAGGGCAGGACTTCCCTTTCCAAAATGGCAACAGCCCCAGCCCCCAAAGAGCAGGGCAGGAGGAAACCTTCTGCGGAGAGAAgagGTGTGAAGTTCAGGGAGCGCCAGAGCTGGTCGGAGCCGGAGGAGTCAGACATCACCTGCTCTGTTGTGATGGAGAGGTGCTCCATGAACCCCAAGGCCAACagGCAcgtggggaaggagagggagcggGACAGCTCCCCCCGTATGGATACACAGCGGAAGTCATCGTGCCCTACGGAAGTTGTCGGGGTACTGGTGCACATGATGGACCTGAAGGACCCGTCCAGCCTGGATGTGTCAGAGGCCATGTTCCACAGAGACCGGGACCCAGAGGAGGAGCAGCTAGATGCCAGGTTAACACGCAGAGTACAGAGGGCGGCTCGCAAACAGGCCAAACAAGAGCAACTCAAGAGACTGCACAGGGCCCAGATGATCCAAAGGCAGTTGGAGCAGGTGGAGGAGAAGCAGAGGCagctggaggagaggggtgtggcTGTGGAGAAGGCCTTGAGAGGGGaagcagACTACTGGGGAGAGTCGAATGACAGTGAAGAGCTGGACTTACACCTGGGAGtcATGGGCAGGCAGGATGACCCAGCTCTGATGCAGCAGTGGTTCAAGCTGGTCCAGCAGAAGAACTGTCTGATGCGCTATGAGTCAGAACTCATGATATTTGCTCGGGAGCTGGAGTTGGAGGACAGACAGAGCCGTCTTCAACAAGAGCTCAGAGAGCGGATGGCCGTGGATGACCACCTGAAGGGTGAGGCAGAGCTGGCTGAGGAGAAGCTAATCCTTGGGGAGATGTTGGAGGTGGTGGAGCAGAGAGATGCTCTGGTGTCTCTGCTGGAGGAGCAGCGGCTGCAGGAGAGCCAGGAGGACAGAGACCTGGAAGCCATCATGCTGTCCCGGGGACTGGGCCTGCACAACTGGGCCTGAGCTCTATTCCGGGGACTGGGCCTGCACAACTGGGCCTGAGCTCTATTCCTGGGACTGGGCCTGCACAACTAGGCCTGAACTCTATCCCTGGGCCTGCACAACTGGGCCTGAGCTCTATTCCTGGGACTGGGCCTGCACGCCTGGGCCTGAACTCTATCCCTGGGCCTGGACAACTGGGCCTGAGCTCTATTCCTGGGACTGGGCCTGCACAACTGGGCCTGAACTCTATCCCTGGGCCTGCACAACTAGGCCTGAGCTCTATTCCGGGGACTGGGCCTGCACAACTGGGCCTGAGCTCTATTCCTGGGACTGGGCCTGCACAAGCAAAAGCAAAAGACACTCACGTCACTTTCCCTCTAAATCTGCGATCAGGGTCATGGTTGTGAGGTCACTTCGCCTCTGATACAACGTTATGACCAGGATCAAGGCGGGACTGTCTGGATGATCCATTTTTAGGATTGGATATGTTTCTCCATCCTGCTACACTCATCCTGTTGCTACACCCATCCTGTTGCTACACCCATCCTGTTGCTACACCCATCCTGCTGCTACACCCATCCTGCTGCTACACCTATCCTGTTGCTACACCCATCCTGCTACACCCATCCTGCTACAcccctgactcactgactgatgGGCCTTTGAGATGGCTCGATATTCTATGCTCACTATACTCACCCAGGCTGTTGTTATGGCAATATATGGCATATTTGAATTGTTTGTATTGTTATTCATTAACAATTTAGAGAAATGTATATTATGTAAAAAGAAACAatactacttttttttttattcaactaATCATGTTTTACTTCATACATTGGATAATAAAGACATTCTGACATCA

Function

NR:

description
protein-methionine sulfoxide oxidase mical3a-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036957662.1 False 3444 mRNA 0.56 20 32189542 32206591
XM_036957661.1 True 6658 mRNA 0.56 29 32189560 32217794

Neighbor

gene id symbol gene type direction distance location
LOC110500253 LOC106609146 coding upstream 8939 32168800 ~ 32180603 (+)
LOC110500252 LOC106609149 coding upstream 27086 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 coding upstream 44656 32114413 ~ 32144886 (+)
LOC110500249 timp3 coding upstream 294998 31873548 ~ 31894544 (+)
LOC110500247 LOC106609254 coding upstream 389421 31745773 ~ 31800121 (+)
LOC110500255 LOC106609093 coding downstream 13354 32231148 ~ 32234741 (+)
arf4 LOC106609140 coding downstream 32828 32250622 ~ 32254298 (+)
vatf LOC106609141 coding downstream 39686 32257480 ~ 32261475 (+)
LOC110500258 LOC106609138 coding downstream 92249 32310043 ~ 32343558 (+)
LOC110500259 LOC106609137 coding downstream 147726 32365520 ~ 32395907 (+)
G1727480 NA non-coding upstream 510811 31678478 ~ 31678731 (+)
G1727468 NA non-coding upstream 530952 31658355 ~ 31658590 (+)
G1727427 NA non-coding upstream 588406 31600791 ~ 31601136 (+)
G1727224 NA non-coding upstream 621381 31567955 ~ 31568161 (+)
G1728052 LOC106609139 non-coding downstream 18527 32236321 ~ 32239087 (+)
G1728064 NA non-coding downstream 22182 32239976 ~ 32240175 (+)
G1728054 LOC106609139 non-coding downstream 23642 32241436 ~ 32243283 (+)
G1728065 NA non-coding downstream 26218 32244012 ~ 32244301 (+)
G1728066 NA non-coding downstream 27203 32244997 ~ 32245365 (+)
G1727220 NA other upstream 624948 31564135 ~ 31564594 (+)
G1727181 NA other upstream 681170 31508056 ~ 31508372 (+)
G1727146 NA other upstream 739425 31449396 ~ 31450117 (+)
G1729465 NA other downstream 1103659 33321453 ~ 33321761 (+)
LOC110500285 fam19a5 other downstream 1492298 33709461 ~ 33869016 (+)
G1732028 NA other downstream 3221495 35439289 ~ 35484354 (+)
G1732735 NA other downstream 3823537 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 4015328 36189389 ~ 36237829 (+)

Expression


Co-expression Network