Gene
RNA
| Item | Value |
|---|---|
| gene id | arf4 |
| gene name | LOC106609140 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 32250622 ~ 32254298 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ADP-ribosylation factor 4 |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07939 | ARF4; ADP-ribosylation factor 4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001160612.2 | True | 1260 | mRNA | 0.46 | 6 | 32250622 | 32254298 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500255 | LOC106609093 | coding | upstream | 15881 | 32231148 ~ 32234741 (+) |
| LOC110501065 | LOC106609145 | coding | upstream | 32828 | 32189542 ~ 32217794 (+) |
| LOC110500253 | LOC106609146 | coding | upstream | 70019 | 32168800 ~ 32180603 (+) |
| LOC110500252 | LOC106609149 | coding | upstream | 88166 | 32153116 ~ 32162456 (+) |
| LOC110501063 | LOC106609150 | coding | upstream | 105736 | 32114413 ~ 32144886 (+) |
| vatf | LOC106609141 | coding | downstream | 3182 | 32257480 ~ 32261475 (+) |
| LOC110500258 | LOC106609138 | coding | downstream | 55745 | 32310043 ~ 32343558 (+) |
| LOC110500259 | LOC106609137 | coding | downstream | 111222 | 32365520 ~ 32395907 (+) |
| LOC110500261 | irf5 | coding | downstream | 155574 | 32409872 ~ 32420565 (+) |
| LOC100135983 | opn1sw | coding | downstream | 201823 | 32456121 ~ 32458130 (+) |
| G1728066 | NA | non-coding | upstream | 5257 | 32244997 ~ 32245365 (+) |
| G1728065 | NA | non-coding | upstream | 6321 | 32244012 ~ 32244301 (+) |
| G1728054 | LOC106609139 | non-coding | upstream | 7339 | 32241436 ~ 32243283 (+) |
| G1728064 | NA | non-coding | upstream | 10447 | 32239976 ~ 32240175 (+) |
| G1728052 | LOC106609139 | non-coding | upstream | 11535 | 32236321 ~ 32239087 (+) |
| G1728072 | NA | non-coding | downstream | 7528 | 32261826 ~ 32266171 (+) |
| G1728073 | NA | non-coding | downstream | 10019 | 32264317 ~ 32314244 (+) |
| G1728111 | NA | non-coding | downstream | 71300 | 32325598 ~ 32325890 (+) |
| G1728112 | NA | non-coding | downstream | 71736 | 32326034 ~ 32326289 (+) |
| G1728114 | NA | non-coding | downstream | 74484 | 32328782 ~ 32328996 (+) |
| G1727220 | NA | other | upstream | 686028 | 31564135 ~ 31564594 (+) |
| G1727181 | NA | other | upstream | 742250 | 31508056 ~ 31508372 (+) |
| G1727146 | NA | other | upstream | 800505 | 31449396 ~ 31450117 (+) |
| G1729465 | NA | other | downstream | 1067155 | 33321453 ~ 33321761 (+) |
| LOC110500285 | fam19a5 | other | downstream | 1455794 | 33709461 ~ 33869016 (+) |
| G1732028 | NA | other | downstream | 3184991 | 35439289 ~ 35484354 (+) |
| G1732735 | NA | other | downstream | 3787033 | 36041331 ~ 36042488 (+) |
| LOC110500325 | ppp2r5b | other | downstream | 3978824 | 36189389 ~ 36237829 (+) |
