LOC110500258 (LOC106609138)


Basic Information

Item Value
gene id LOC110500258
gene name LOC106609138
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 32310043 ~ 32343558 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577515.2
ACTAATTAAGCACGTGATAGTCCCTCagcatccagagagagagggagagagatgtacagAGACGGACAAAAGTGAGGacgaaaaaaagaaagagagagagagagaaaatagagagagacaaagagagagagagagagagagagagagagagagggaaagagagagagagaaaaagaaagaaagaaagaaagagagagtgagacagagatacatttagagagtgagaggagagagtttGTGAGTTCTAGCACACTCTCTGTGGCTGAGTCGTTGAAGAGGGAGACGATGTGGGCTCAGTCACGTTGTGTCATATCATAAATGTGAAGGCAGGGGACAAGTTTCTGACAGCACAGTCATGGAATTTCCCTTCAGACAGATGGCTCATCAATAGTAAAACTCTGCACAGTTGCAGCGCAGGAGGAGATGGACTAGTGTGAGTGTGCGGCGGAGCGAGGGTGAAAACAGCTGTTGACTGACAGTTTTGTGGAGCTGAGAGAAGGAAAGCAGCGGAGCAGACAACATCAGGGCTGACTGAGACAGTTTGGACTGGGAACCTCGGAGTGACAGGGGTAACAGGACTGATAGACTTCATGGGGTCAAAGGCTTGATGTTGATGTGTGATCTGTGATGTCACTCAGGGAGATGAGCATGACTGAAGAGTCATCTCTGTAAAACATGGCTGTCACGGGTCTCAGCGAGGCGAAGCAGttggctgacacacacacgctaaaCACACTGCGTCTAGAACCAGTGGTCAGGACACACATCACGCTCTGCGCATCTCCCGGCCTCACTTCATGAAGATGTTAACTTCAGAGCGACAGTGCAGCCCGGGGCCTCCATAATCGACATGGTCAACGTGACGACGTCACCCAGCAGCAATGCCACCCCAGAGGGTCTGACTGAGGGGGGGCTGGTGGTCCTGGGCCAGAGGGAAGAGTATGATTACAATTACTTTGCCCTGGTGCTGGGCGTGCCCCTCATCCTGATCATCATCCTGGGCAACGTACTTGTGTGTCTGAGCGTGCTCACTGAGCGCTCCCTGAAGACTGCCACCAACTACTTCATCATCAGCCTGTCTGTGGCCGACCTACTGCTGGCTGTACTGGTGCTGCCCCTCTACGTCTACTCTGAGTTCCTGGGTGGTATCTGGACCCTGAGCACATACATCTGTGATGCTCTGATGACCATGGACGTCATGTTGTGCACTGCCTCCATCCTCAACCTATGTGCCATCAGTGTGGACAGGTACATAGCGGTGGTGGTGCCCCTGAAGTACAACAGGAACCAGTTCAGCCTGCGGCAGCTGGTCCTCATTACGGCCACCTGGGTTCTCTCCCTGGGCGTCGCCAGTCCTGTCATCTTCGGCCTCAACCAGGTGCCGGGCCGCGACCCCACCGTGTGCAAGCTGGAGAACGACAGCTTCGTGGTCTACTCCTCAGTGTGCTCCTTCTTTGTGCCTTGCCCAGTCATGCTCTTCCTGTACTACTGGATGTTCCGGGGATTGAGACGCTGGAGCTCAGGCAGGAGGCGCTCCCAGCTGACGAGGGGAGGAAAACGGGGCCTGTCCCTGCACCTCTGCTCCGCCCTGCAGAGGGAGAACGCAGGGGTCAGGGCGGGGGCCAAGGAGAAGGTGGTGTACCTCATGCCCTCAGGGCTCAGCCCAATGTCACCGTCGACCGTATCGATGCCGTCGCCCACAGCGACCCCGGGGGTGGAGGGCAAGCAGCAGGATGGTGTGGGGGCTGGCATGGCGGAGAGCGACCCCATGACTACCCAGATAGAAAGCGTTTCGGACGCGGACCCCACGGAGAAGCCGCCTAGGCAGGGGAGGAGCCGGAAGGAGAATGGGCTGGCCCACGCTAAGGCCACCAAGAGGGGGCGCCGCAACAGCAAGAGTAgcagagtgagtgggagggagcgAAAAGCCATGAAGGTCCTTCCTGTTGTAGttgGTGTGTTCCTAGCCTGTTGGACGCCTTTCTTTGTGGTACATGTGACCAACGTGCTGTGCGTGTCCTGCAAAATCAGCCCTACTCTGATCTCCGTGGTAACGTGGCTGGGCTACGTCAACAGTGCTGTCAACCCCATCATCTACACTGCCTTCAACGCAGAGTTCCGGAATGTCTTTCACAAACTTTTCTGCTGTCGAGCATGAGGCCTGAGTTCTGGAACCTCTTTGACAAACTATTCATTGAGATAGAAGAACAACTTTCTTTCAGGTTCAATCTGAGACCTGAATTGTAGAATGTTGCACTCGGCCATGAGACCTGAATTAAATTATCTTTCACAAAACTCCTCGGTTGATGGATGTGAGAGTGACTTCCTTACCCAAAGGGGTTTTCCTGGATCTAAGTGCTGGCAGAAGGTGAGGTTGTCAAAATGGATGAACCATAACAGGGGACAACCTGACAAAATTCGACGGATGCCTTAGTTGACATATTGTGAACTGAAAGACAGTGGCTCACTGTATCTGATGTTTCTACATTGAAGTTGATACTGTGTGACGGTTTTTCGTCCTGTAAAATATTGCTTGGATAAAGAAGATGGTGAATGCTGTTAATATCATAGCCCAAAGGCATAAAATCTGTGAACAATGTGCACACTTAAGATCACGTAACTATTTGATATGTGAGTTTTGATTTCTCTCAGAATTAAATGTTAATGCTATGTATGGTTCTCTGTTTTGATTTAATAATGTGCAGGTTTTCTGTGAAATTTGGTATTGGTATTTTCTTTATAATATACTTTGTCTCCTTTTATCCTGAGGACGTGGGAGACTTAAGGGACGTAGTGTGGCTCAAGAGGAACTTACATTATATAACAAACATTACATATTCTATCTTGTGGACATTGCCTGTAGATAAATATCATGAACATTTACGCCACAAGAAGTGACAAATTACAGACTTCAAGGGACAACATTGTGGAAACAACTATTTAAGATGATATCATTCCGTAAAGTTATACTTTGACCTATTTTGATCAAGTGCTTACAAAAGTGCTGTGAATTAACTGAGGTGAATGTGACAAATGTAAACAATTCTCTTTGTCGTTGATCGAAAAGTAATAAAACATGTTCCACATAATATGAATGCCGTATTTCCCCTATGTAAGAAACCGAGAACACTCGTCACAATCAGAATGGAATCATTTGAAATGACAGAGATACAATCTATTTTTCCATGTCACTGAGAGCGATATGGAATGTTGGTCGATCCCCTCATGTCAACACAAGCCACCGAAGACACTGCCGTATCACACCCACAGGAA

Function

NR:

description
D(4) dopamine receptor-like isoform X2

GO:

id name namespace
GO:0007195 adenylate cyclase-inhibiting dopamine receptor signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0004952 dopamine neurotransmitter receptor activity molecular_function

KEGG:

id description
K04145 DRD2; dopamine receptor D2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577515.2 True 3273 mRNA 0.49 6 32310043 32343558

Neighbor

gene id symbol gene type direction distance location
vatf LOC106609141 coding upstream 48568 32257480 ~ 32261475 (+)
arf4 LOC106609140 coding upstream 55745 32250622 ~ 32254298 (+)
LOC110500255 LOC106609093 coding upstream 75302 32231148 ~ 32234741 (+)
LOC110501065 LOC106609145 coding upstream 92249 32189542 ~ 32217794 (+)
LOC110500253 LOC106609146 coding upstream 129440 32168800 ~ 32180603 (+)
LOC110500259 LOC106609137 coding downstream 21962 32365520 ~ 32395907 (+)
LOC110500261 irf5 coding downstream 66314 32409872 ~ 32420565 (+)
LOC100135983 opn1sw coding downstream 112563 32456121 ~ 32458130 (+)
LOC110500263 LOC106609128 coding downstream 130423 32473981 ~ 32494341 (+)
LOC110500266 LOC106609126 coding downstream 179214 32522772 ~ 32531043 (+)
G1728072 NA non-coding upstream 43872 32261826 ~ 32266171 (+)
G1728066 NA non-coding upstream 64678 32244997 ~ 32245365 (+)
G1728065 NA non-coding upstream 65742 32244012 ~ 32244301 (+)
G1728054 LOC106609139 non-coding upstream 66760 32241436 ~ 32243283 (+)
G1728064 NA non-coding upstream 69868 32239976 ~ 32240175 (+)
G1728131 NA non-coding downstream 9068 32352626 ~ 32352910 (+)
G1728132 NA non-coding downstream 10478 32354036 ~ 32356561 (+)
G1728188 LOC106609130 non-coding downstream 114734 32458292 ~ 32462718 (+)
G1728191 NA non-coding downstream 121644 32465202 ~ 32468500 (+)
G1728170 NA non-coding downstream 151052 32494610 ~ 32495559 (+)
LOC110500252 LOC106609149 other upstream 147651 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 173347 32114413 ~ 32144886 (+)
G1727220 NA other upstream 745449 31564135 ~ 31564594 (+)
G1727181 NA other upstream 801671 31508056 ~ 31508372 (+)
G1727146 NA other upstream 859926 31449396 ~ 31450117 (+)
G1729465 NA other downstream 977895 33321453 ~ 33321761 (+)
LOC110500285 fam19a5 other downstream 1366534 33709461 ~ 33869016 (+)
G1732028 NA other downstream 3095731 35439289 ~ 35484354 (+)
G1732735 NA other downstream 3697773 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 3889564 36189389 ~ 36237829 (+)

Expression


Co-expression Network