LOC110500278 (LOC106609115)


Basic Information

Item Value
gene id LOC110500278
gene name LOC106609115
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 32793210 ~ 32834958 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577571.2
ACAGGGGCATTCAATGTAACGTGTATCTGATGCCATCTAGTGTATAAAGACGGAAATTATTTGGATCAAACTGCACTTTTATAATCTTAACAATGACCACACGATGCTGCCATTCTCCATCCATACACCCGTACATCAGTAATGTCATTGCGACACTAACTATTAGGCCTACACCATTTGGTATTTCACAAACATATTCACGTTAGATTGGAATGTCAAACTGTATGGCTACATACAATATGCTAATGCTCTTCGTTTTTAATTAGATCGGCGGTTTTTAACTGCATTGGACGTTTTAAATTGCATTGCAGGTAACAAGCTGGTGTGATTGTTTGAGACTCAGCTAGTGGCCATCAATAATCCAACATATTCCATCAATTGGCCTCTATAATTGGCCTTGAGAAGGTTACCATTTACCGAACCGTTTAACATTCGTAAGAAAACGATATACATTCACTTTAATGATTACAATGAACGGTGTTAAAAATAGAGCGGCCACGATGTTTCTTCACTCATTCAATGGGGTTGATATTTTCCCACTGTCAGGTTGGTAGGGGACATCTCAGAAGGCGTGGCTTGATTACGTTTCACTCctcccgtcacacacacacatgagcggGCAAGTGTATTTTTCTGTCCCTATCACCTCGCAAGGCTGGCCTCTACACGGGAATAATGCAATGTCATTGAAAATGTTACCTCGTATATCGTAGCCTACGTTTATTCAGAATGCGCCTCGCCCGAGATATAAGCACAGAAAATAGCACGCTAATGCTGACTTCGTATTGAAATTATTTGTATCAGGTGGATGTGAGCTGCGGTGGCTCAAGCGCATCGGTAACGAAGCTGCATGCTGTAAAACCGTTAAATAAAAAGAAAACCAAGCTGTTTATATCGTGGTTGTTCCTAGCAGTGACGACCCTCCGGACGTCGTAACCATGAGTGGACAGGACGAAAGTTCGGTGCGGGTCGCGTTGAGGATTCGTCCTCAGCTGGCGAGGGAGAAGATCGAGGGATGTCACATCTGTACGTTCTGCATGCCCGCCGAGCCCCAGGTGATGCTGGGTAAAGACAAGGCATTCACTTACGACTACGTGTTTGACATGGACTCCCAGCAGGACATCATCTACACACACTGCACTGAGAAACTCATCGAGGGATGCTTCGAGGGGTACAACGCTACCATCTTCGCCTATGGACAGACTGGTTCGGGGAAGACCTACACCATGGGCACAGGGTTTGACGTGAACATCAGTGAGGAGGAGTTGGGCATCATTCCCCGGGCAGTCAAGCACCTCTTCAGGGGCATTGAGGAACGACGGCACTCCGCCACAGAGCAGGGCAAGCCTGTACCCGAGTTCAAGATCAACGCACAGTTCCTGGAGCTGTACAATGAGGAAGTGTTGGATCTGTTTGAATCAACGCGGGACATGGATGGGAAGAGACAGAAGTCCACCATCAAGATTCATGAGGACGCTAGCGGAGGCATCTACACTGTGGGAGTCACCACGCGCACGGTCACCTCCGAGGCAGAGATGATGCAGTGTCTGAAGCTGGGTGCTCTGTCCCGTACTACAGCCAGCACCCAGATGAACATCCAGAGCTCGCGCTCCCATGCCATCTTCACCATCCACCTGTGCCAAGTCAGAGTCTGCACTCCAGACGACAGCGAGTCCAATGAGACAGACGGCCGCCTGGCCAACGGTTCCTCTGAGATCAACTCTGAGTTTGAGACGCTGACGGCTAAGTTTCACTTTGTGGACCTGGCCGGGTCGGAGAGACTAAAGAGGACAGGAGCTACTGGGGATAGAGCCAAGGAAGGCATCTCCATCAACTGTGGACTGCTTGCTCTGGGTAACGTGATCAGTGCTCTGGGGGACAGGAGTAAGAGGTCCACCCACGTGCCTTACAGGGACTCGAAACTCACCCGGCTACTGCAGGACTCTCTGGGAGGAAACAGtCAAACGGTGATGATAGCGTGTATCAGCCCATCTGACCGGGACTTCATGGAGACACTGAGCTGTCTGAACTACGCTAACCGAGCCAGGAACATTAAGAACAAGGTGATGGTGAACCAGGACAAAGCCTCCCAGCAGATATCAGCTCTCAGGACTGACATTGCCAGGCTACAGATGGAACTGATGGAGTACAAGACGGGCAAGCGTATGGTGGGGGAAGACGGCATGGAGAGCATCAACGACATGGCCCATGAGAACAGCATGCTACAGACAGAGAACAGTAACCTGAGGATCAGGGTCAAGGCCATGCAGGAGACCATTGACGCCCAGAGGGCCAGACTCACACAGTACCTCAgtgaccaggccaaccaggttcTGGCCAAAGTGGGTGAGGGGACTGAGGAAATTGGAAATATGATCCAGAACTATATCAAAGAAATCGAGGAGCTCAGAGCCAAGCTCCTGGAGAGTGAGTCAGTGAATGAGAACCTCCGTAAAACCCTGTCCCGTGCCAACACACGTTCCTCCCTGTACGCTGGTGGGGGCTCCTTCTCCCCAGCCCACTTCGCCCCCGAGATAGTGGCTTCCGACATCATCGAGATGGCCAAGAAAGATCTGGAGAAACTcaagaagaaagagaggaagaaaaagaaGAGTGTGGTCAAGGAGGGGGTACCAGACAACGAACAGGAATGAGGCAACGACGAGGCTGAGGGGGAGGACCACGTCAGTGACcatgaggaaggagaggagctggagggagaagaggaggagtatgagatggagggagaggagagctcGGACGAGTCCGACTCTGAAGAACTGGATGAGAAAGAGGACTTCCAGGCGGATCTGGCCAACATCACGTGTGAGATCGCCATCAAGCAGAAGCTGATAGACGAGCTGGAGAACAGCCAGCGCCGTCTGCACACGCTCAAACAGCAGTACGAACAGAAACTCATGATGCTGCAGAGCAAGATCAGAGACACACAGCTGGAGAGGGACAAGGTGCTGCACAACATGGGCTCAGTGGAGACGTGCACGGAGGAGAAGGCTAAGAAGATTAAGTTAGAATATGAGAAGAAGCTGAGCTCTATGAACAAGGAGATGCAGAAGCTACAGTCAGCCCAGAAGGAACACGCACGCCTCCTCAAGAACCAATCACAGTACGAGAAGCAGCTCAAGAAACTCAACCAGGATGTGGCTGAGATGAAGAAAACAAAGGTGGGCCTGATGCGCCAGATGAAGGAGGTGCAGGAGAAAAACAGAGTGTCAGAGTGCCGACGCAACCGAGAGATCGCTACTCTGAAGAAGGACCAGCGCAAACATGAGCACCAACTGAGACAGCTGGAGGCTCAGAAGAGGCAGCAGGACCTGGTACTACGCAGGAAAAATGAGGAGGTGACAGCTCTGAGGAGACAGGTGAGGCCCACCTCagggaaggtgaacagaaaggtgAGCCTACCGGAGCCCCTCCAGGACCCTTCACACCGTGGCATCCCAGGCAGACCTCACTCTGCTGGGGCAGTAGCCCCCAATGGAACCCCAAGGAAGTACCCGTTGAGGACGGGGAGTGTCTACACCACCAGGACAGCCCGGGTGAAATGGCAGTCTCTGGAGAGACGCATCACTGACATCATCATGCAGAGGCTGACCATCTCAAACATGGAGGCTGATATGAACCGCTTCCTCAAGCAACGTGAGGACCTGACCAAGCGAAGGGAGAAGGTGTCTCGTAAGAGGGAGAAGATCGCCACAGAGGGGACCGACACGGACCGAAGCATCCAGTCTTTGAACGAAGAAATGGATGCCCTGGCGGCCAACATCGACTACATCAACGACAGCATCGCTGACTGTCAGGCTAACATCATGCAGATGGAGGAAGCGAAGgaggagggagacacagtGGACATTACCGCGGTGATCAGCTCCTGTAACCTATCAGAAGCCCGCTTCCTGCTTGATCACTTCCTGCACATGGCCATCAACAAGGGTCTGCAGGCGGCCCAGAAGGATTCCCAGGTGAAGATGATGGAGGGCAGGCTGAAGCAGACAGAGATCAACAGCGCCACTCAGAACCAGCTGCTGTTCCACATGCTGAAGGAGAAAGCTGAACTCAACCCTGAGCTGGACGCTCTGCTGGGCAACGCACTGCAAGAGATAGGTTACCTACTGGTGGGAGAGAATGGCGATGACAGCAGTAGTGATGAGTCCTCTACCCCCAGCCCAGCCACAGAGGGAAGTTTATTGGCCTCTGACCTCCTGAAACTGTGTGGAGAGGCCAAACCTAGGAAGGCACGCAGAAGGACAACCACCCAGATGGAGCTGCTGTATGCTGATAGTGGTGAATTTGACTCCCCTACGGGGGACTTTTCTGCCTCTCTGCTACCCCTGGCAGAGGCCCAGGAAGGGACAGGGGACATGGGGCCAGTAGCAGGACATCTCGGGGACAGGGAACTCACTGTGTCCCCCTCAGCACTGTCCACCAGGATAGCTGGACTTTCTGGAGTCTGGTCTTCGATGGGAGCTGAGACTAGATCACTGGAACGCTCACCTCGAACACCCAGGAGGATGCTAGAGAAGGGAGGACAACCCCCCTTAGACGTCAAGGAACACACACCTATGGACCCCAAAGGACACCCGGCACGAGAGACAAAGTCACACATACCCACGCCCACAGCCACAGAGAAGACCAAAATCACAGACACCAAACCAACGATGGAAGAGTCGATTATATATCAAGGACAAAGAGGGGTGATCAACCCCGTGTCATCCCCTAAGAGCAGCCATGCTGCCAGACTACAGTGTGTCTATGTGGCTGAGGGACACACCAAACCTGTCATGTGTGTCGACTGCACTGATGACCTGCTCTTCACTGGCTCTAAAGATCGTACGTGTAAGGTGTGGAACCTGGTGACTGGTCAAGAGATCATGTCTCTGGGAGATCATCCCAGCAGTGTGGTGTCTGTTAGATACTGTTCCAGCCTGGTCTTCACTGTCTCCACCGCTTACATCAAGGTCTGGGACATCCGAGACTCCGCCAAGTGCATACGCACACTCACgtcGTCGGGCCAGGTGAGTACAGGGGACAGCTGTGTGTCTCTCAGGTCCCTGTCCATCCCTCCAGGAGAGAACCAGATCAACCAGATTTCTCTGAACCCTACGGGATCCTACCTCTACTCCGCCTCTGGCAACTTAGTCCGCATGTGGGACCTCAGGAAGTTTGTGTCTACTGGGAAGCTGACGGGTCACCTGGGTCCGGTCTTGTGTCTGACCGTCGACCAGATGGGCAACGGTCAAGACGTGGTCCTAACGGGGTCCAAGGACCACACCCTGAAGATGTTTGAGGTGACGGAGGGTGTCCAGGGCAGCATTGTGTCCTGTCACAACTTTGAGCCACCACACCAGGAGTGTATCGTCTCTCTggctgttcaggggaacagcctCTACAGCAGCTCCAGAGACTACTGCATCAAGAAGTGGGACCTGTCCCGGAAACGACTAGTACAGCAGGCGGCGAGCGCCCACTCTGACTGGGTAAGTGCGCTGGGTGTTGTGCCAGGGTGCCCGGTAATGCTGAGTGCAGACAGGGGAGGTCTGCTGAAGCTGTGGCACGCTGATTCCCTGGCACCGCTAGGAGACCTGAGGGGACACGACAGCCCTGTTAACGGATTGGCTACCAACAGCAGCCAACTATTCACTGCCTCAGATGACCGGACAGTGAAGATTTGGCAAGCAAAGGGTTCTTTGGAGGAAGGCATCCATTGACACTGAGAAGGAGACCTCTGGACTGTGACCGGACACAACTCTGGGGACCTACTAGATTACTCTGGATCTACTACAGCCTATGGATCTATTGCTGCCTGCTGGATCTACTACTCGATCTATTTGCTTGCTGCTCTGCACAATGATCTGTGGATGTAGGACCTCCGAAGACGGTCACAGGGCAGATGACCAGCCCTGACACACATATGACCCCTTGAGTTCACCAACATAAGACGTTCACTCGACGAGGTTGGAGGAGAGTAGCACAACAGTCATGGTATTCACCTGAAGGACAGTGAAACTCCAGTGTAATGCCCATGGTTCTGTCTCATGCTGTGTCCTCTCTATACATATCGTAGAGGAATCATCCACTACAGTGCGTGGAATCATCTCTCTGTGTTAGGCGGGGGGGGATGTCTTCTAAATAAAGGCCCTATGGAGGTTGGTCTTACTTCAGCTGTTACTGCCAAACCCTATGGGAGACTCATATAGCCTTAGTGGGGAATAGGGATATCTCAGTAGGAATAGCACAGTGAACTAGTGGTCGTCATCATTCTACAATATGTGATTGTGGATTTTCATCTCAACCAAATTCAAGTGTTGCTTTTAATGTCGTTACCTGCAGATCGTGTGTGACCAAAGTACAAACCTTCTCTGTGTTAGTCAACGGGCTGTGACGAGAGTATCTTTAGCCAACGTTGTACTTGCCTGTGTACAGTACCTCTATACTGGTCTTACTCTCTTTGTATCGTGCAAGTACATTCAAACCTCAAACTACAAAAAGTGGTTTGATCTTTAATTTTCTGTCAAAGTGTTTGTATTTACGTGTGTTTTCATGGTGACTTTGAAACCTCCAGTTCTGAGCTTCCATTTCATGTTTGTATCCAATGGCCTGCGTCAATCATTTCAGAGCCCAGGTAAAGTGAGGTTACCTGTGCACAGGCGTATGCCCCATCTTAAATCAACTCAAAAGTTTACTGATCGTgtgcacagatttgcagatgttatcgcaggcgcagcgaaatgcttgtgtttctagcgccaacagtgcagtaatacttaGGAATAAAACATTTCTGAGTGAGCTTTCCTGTGCCCACATATTCCATTCCCCCAATCTGATTCAGGAACGGGCTGAACAGAATGGAACAAAACATAGAGGTGTGTGTTATTATCAGTGCCTGTCAATCGTATACTGTAGACACAGTAGTACAGTATCACAACCTAATCTGTGTGGACTAGCCCAGGATCCCTAGATTGGGATGACATAGGTTTTATGACCACATCTTtatgtaaataagaatctgttttTCTTCCTCCTGGACATATTGCGCGCAAATTCCGACTTTTTAGTGTTTCTAATTTCATATGCAGTGTGGAAATAAATGTCATCTGTCAAAAA

Function

NR:

description
kinesin-like protein KIF21A isoform X3

GO: NA

KEGG:

id description
K24185 KIF21; kinesin family member 21

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577571.2 True 7125 mRNA 0.51 34 32793210 32834958

Neighbor

gene id symbol gene type direction distance location
LOC110500276 LOC106609116 coding upstream 879 32767995 ~ 32792331 (+)
LOC110500277 LOC106609118 coding upstream 37118 32694217 ~ 32756092 (+)
LOC110500271 LOC106576017 coding upstream 156974 32613167 ~ 32636236 (+)
LOC110500270 LOC106566433 coding upstream 190318 32594388 ~ 32602892 (+)
LOC110500268 LOC106609123 coding upstream 207547 32570744 ~ 32585663 (+)
LOC110500279 LOC106609114 coding downstream 6831 32841789 ~ 32957803 (+)
LOC110500281 trmu coding downstream 215517 33050475 ~ 33053507 (+)
LOC110501067 LOC106609112 coding downstream 219102 33054060 ~ 33166691 (+)
LOC110500282 LOC106609111 coding downstream 345716 33180674 ~ 33253523 (+)
LOC110500284 LOC106609109 coding downstream 494969 33329927 ~ 33515988 (+)
G1728269 NA non-coding upstream 125231 32667611 ~ 32667979 (+)
G1728265 NA non-coding upstream 130954 32662049 ~ 32662256 (+)
G1728260 NA non-coding upstream 137217 32655785 ~ 32655993 (+)
G1728259 NA non-coding upstream 137616 32655389 ~ 32655594 (+)
G1728252 NA non-coding upstream 148194 32644794 ~ 32645016 (+)
G1728542 NA non-coding downstream 297603 33132561 ~ 33150958 (+)
G1729333 NA non-coding downstream 429936 33264894 ~ 33265132 (+)
G1729338 NA non-coding downstream 435668 33270626 ~ 33270856 (+)
G1729344 NA non-coding downstream 441089 33276047 ~ 33276267 (+)
LOC110500252 LOC106609149 other upstream 630818 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 656514 32114413 ~ 32144886 (+)
G1727220 NA other upstream 1228616 31564135 ~ 31564594 (+)
G1727181 NA other upstream 1284838 31508056 ~ 31508372 (+)
G1727146 NA other upstream 1343093 31449396 ~ 31450117 (+)
G1729465 NA other downstream 486495 33321453 ~ 33321761 (+)
LOC110500285 fam19a5 other downstream 875134 33709461 ~ 33869016 (+)
G1732028 NA other downstream 2604331 35439289 ~ 35484354 (+)
G1732735 NA other downstream 3206373 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 3398164 36189389 ~ 36237829 (+)

Expression


Co-expression Network