XLOC_036255 (slc2a6)


Basic Information

Item Value
gene id XLOC_036255
gene name slc2a6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 12854105 ~ 12867434 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070873
TTTGAACCATGTCTACCCTAAGAACTAAGAAATCCCAGTATTGCAAAAATGGAGTTTTACTTTCACTTGCTCTCATTTATACTCGTTCGTGCTTCCAAGTCATTCAGTCTGCAGGGTAAGACGGAGGAGAGATGGCAGACCGTTCGGATGAAGCGACCCCGTTAATTAACAACTCACCACCCCGGATAAGTCATGGAAAGCTCTACCTTGCGGTGTTTTCAGCGGTCCTGGGCAATTTCAATTTCGGATTTGCTTTAGTGTTCCCTTCCCCTGTCATCCCTCAGCTTAAACAAGGAGATGACACTCGGCTGCAAATGAACGTCCATCAGATATCATGGTTTGgtTCAATTTTCACTCTTGGAGCGGCTGCAGGGGGTCTCAGTGCCATGTTTCTGAATGACCGAGTCGGAAGAAAAATAAGCATCATGATATCAGGATTACCGTCTGTTCTTGGTCTCCTTGTGATGGGATCTGCACAAAACTTCTGGATGTTGTTATGGGGCAGATTTCTGACTGGTATCGCTGGTGGCATCACTGCGGGCTCCATTCCTGTGTACGTGTCAGAGATCTCCCACCCGTCCGTAAGGGGTGCGCTGGGTTCATGTCCTCAGATCACTGCCGTATTTGGAAGTCTAGCGCTCTACGCTTTTGGCCTGATTTTGCCGTGGAGGTGGCTGGCTGTGGCTGGGGAAGTTCCTGTTGTTATCATGATGCTTTTGCTTTGCTGCATGCCGACCTCTCCACGTTACCACATCATGAAAGGAAACAGAGCTAAAGCTGTTAAATCACTAGAATGGCTCAGAGGGCCCAATTCTGATTATATGACTGAGTTTAATAAGATCGAACGCAGCATCACAACTCAGGGTGTACAATGGAGCGATCTTAAAACAAAATCATACTATAAACCAATCCTAATTTCAGTCGTCATGAGATTTCTTCAGCAAATGACTGGTATAACACCGATTCTGGTATATCTGGAGCCCATATTCCACCTGACAGCTATATCGCTGGAACCGAAATATGACGCAGCTTTAGTAGGAGCTGTAAGATTGATCTCTGTTGCTATTGCAGCCAGTTTGATGGACAAAGCAGGCAGGAAAGCTCTACTCTTCACTTCAGgATTTTTGATATATATAGCCATGCTTTCAATGACCATGTACACCCACCAAACACCATGCAGCCAAGGGAATCTTACCCTAACAGACGGCCTGAATATCTCTTCTGAAGTCCAAGCGGGGGCTGCTTTTGATCCAAAGACTCTAATTCCTCTCATCAGTGCTATGGTTATCATTTTTGGTTATGCTATGGGCTGGGGTCCAATCACATGGCTGCTAATGTCAGAGATTTTACCTTTGGGTGCGCGTGGTGTCGCATCCGGTTTGTGCGTTGGTGTTAGTTGGATCACAGCCTTCGTCCTGACGCAACTCTTCATGCACGTTGTGGTCGCCTATGGACTGTATGTACCTTTCCTGTTCTTCTGTGTGGTCTCTGTAGTGAATATAATATTCACTGCTAAATGCGTGCCGGAAACCAAAGGTCGAACTCTGGAGGAGATTGAGAACTACTTCAGGACTGGCAGAAGCTTCACCATTCATGATCCTTAAAACGTCCATATGCTGGATTCAGAAGGTGACACTATTGAATCTACACTGTAGAAAATATGTTAAATCACTgtgtctgtattttgtgattcacaagtgtttatcaacggttgtgaattgcattatgagacgttgatctttgctctgtcgacttttggtgttgaaaattcaactctacactctttaatgacattttagtagtttgaactcATAGGTTGTTTTTAATCACGTGGTTCTGGTGAAGTGTAAAAtccagatggagggcaggaagtaaaaaactgaatgggaCTCATAGAggaaagtctgtatttttcaatagtatctggatgcagcctttatgatgcaagctgagattgaatcgctcagagatgcaatgtcagacacaatgcactcaacaGAGCTAGTGACGTTACTGTgagggttaggggtgggtttaggtaagtgcattaaaaagcactggatgcatctcagattgcatctgcaccgagtctgcagccagacccctctcaggtTTTTTTGCGGTTTATACCATATTTTAAATGagatatacaattgaagtcagatttattagccccccctgaattattagaccgcttggttttttttcccccagtttctgtttaacggagagcaaatttttcaacacatttctaaacataatagttttagtaactcatctctaataactgttttattttatctttggcatgatgacagtaaataatattttactagatatttttcaagacacttctatacagcttaaagtgacatttacaggcttacctagcttaattagattaactgggcaggttagggtaattaggcaagttattgtataacgatgttctgtagactattaagaaaaaaaatagcttaaaggggctaataattttgtccctaaaatggtgtttaaaaaatcaaaaactgcttttattctagccaaaataaaacaaataagactttttccagaagaaaaaatattatcagacatactgtgaaaatttctttgctctaataaacataatttggaaaatatttaaaaaagatgaaaaacattcgaagggggctaataattctcatcagacttcaactgtaaatagaaaataagcacatatgttggccatgatccttatatcatgaagagggccgagttttctactgaactcTATTTGCCTGCAATCAATGCGTTACCTACTTTATAATTAGACCTACCTTAcattaaaaatactgtagtaaatactAAAGTGTTTGGAGGCAGactatagataattacttgaaaTAAACTGGCGTACTGTAATTATATTGTGGCTGTGGTACAgcacaactgtagtaataaacaagTTTTTgaataggcttcagttttctacaccataattatacaccatcacgatacaccactgtttacagtaacgTTACAGTTGATCAGTTTACTATGtacagtattctgtagcatttattaacaaagagttgcacgcattatacactttactatttggttcaaaaacatgtttattaaaattactatagtttttttccccatgcggatatcttccagacatcacaaaataacagatgCAGCATAcaatgcatttcttttttgtcCAGTCGATAAACTTACCATTAACAAATATTCACTGCATCTTGATGTTCACTTTACGGTTGTTTATTCTGCCGAAATGCCAGTAAAGGCTTGGATTATTGCAAAACCAGACAGAGATTTCGTTGCAGTGATTACATGGCAGGGTAcgttatttatattctcctggattttgtataagtggggtggtgtttgtatctgatttttacagaacacaatatatttactgtatacaCATAGCTAGACCTGTGtataatctttattggtgctgtaAAACTAATTATCGCGTTCAAAAACGTTTGGACACATGgatgtaatgaaaaaaaataatttattacaaGCCCCACTTCCTtctgtttttcagccagtttcttgaacttttcCTCCCTTTATGACCAAAAACTTTTGGAGGTTGATCAAATCTGTTTGACTTTTCTTATTTTGgctgatttaaatatttatgaacaaaataaaacagaaacattttgatgttctgattgCGATTCCTAtgtaaaataatcactttctgctCTTCATCTGAATTTCGCAGCTCATCAATGACGTCATGTAAAAACAGCAACCcatacatcactttaaactatttaaaaaaagttaataaaagtcacttttttttttttaattgtcaagaCTTAAGGTTGTTGgaaaaaagatcaaggtcccattatGTAATTctaatgcataaaattaaaacatggatcacagaatacagaaaactgcttatTTATGGATATGATATTTTTAGTGTATAGTGCCAAGACCAAACACTATATTTTACTCCAATTGTGCATTTGTTTACTAAATATTATATCTGATTTACATATTTCATTGTTGTAGCTCTGATGTAAATGTCTTAATTACATTTTGTAATGTgtaaaatctgattcattttaattagaaGGATTTACTGTATTTGATGAGTGAGTGCAtctgaaatgtttaattaaatgtatactgtgtatatataaactCTACTTGTCCTCTcaatttttatatatgctcatgTGACTGGTAAGTTCACTTCTCTTTCACTGTTCTGCAAATCAGAGTGACCAGGCTAAACCTATATTGCACAAAATGTGTTACTCCAAGAACAAAAGCACATTGACACGGAGAAGTTCCCATGATTGCATTAATGTGGGTGTGAACCACGACTTGAGCAAGACATCAGCAAAATTAACCTCATGGCCATAGTCATGTGCTGATGCTTCATTGAAGAAATCaaagttgaaatcaaaattatttgccctcatgtggatttttttttgtctttcaaaATTTtttccaaacaatgtttaacagagcaaggcattttttcacagtatttcctatagtatttttttcttctgtagaaagtcttatttgttttattttggaaagaataaaagcagttt
>TCONS_00070874
CTCTACCTTGCGGTGTTTTCAGCGGTCCTGGGCAATTTCAATTTCGGATTTGCTTTAGTGTTCCCTTCCCCTGTCATCCCTCAGCTTAAACAAGGAGATGACACTCGGCTGCAAATGAACGTCCATCAGATATCATGGTTTGgtTCAATTTTCACTCTTGGAGCGGCTGCAGGGGGTCTCAGTGCCATGTTTCTGAATGACCGAGTCGGAAGAAAAATAAGCATCATGATATCAGGATTACCGTCTGTTCTTGGTCTCCTTGTGATGGGATCTGCACAAAACTTCTGGATGTTGTTATGGGGCAGATTTCTGACTGGTATCGCTGGTGGCATCACTGCGGGCTCCATTCCTGTGTACGTGTCAGAGATCTCCCACCCGTCCGTAAGGGGTGCGCTGGGTTCATGTCCTCAGATCACTGCCGTATTTGGAAGTCTAGCGCTCTACGCTTTTGGCCTGATTTTGCCGTGGAGGTGGCTGGCTGTGGCTGGGGAAGTTCCTGTTGTTATCATGATGCTTTTGCTTTGCTGCATGCCGACCTCTCCACGTTACCACATCATGAAAGGAAACAGAGCTAAAGCTGTTAAATCACTAGAATGGCTCAGAGGGCCCAATTCTGATTATATGACTGAGTTTAATAAGATCGAACGCAGCATCACAACTCAGGGTGTACAATGGAGCGATCTTAAAACAAAATCATACTATAAACCAATCCTAATTTCAGTCGTCATGAGATTTCTTCAGCAAATGACTGGTATAACACCGATTCTGGTATATCTGGAGCCCATATTCCACCTGACAGCTATATCGCTGGAACCGAAATATGACGCAGCTTTAGTAGGAGCTGTAAGATTGATCTCTGTTGCTATTGCAGCCAGTTTGATGGACAAAGCAGGCAGGAAAGCTCTACTCTTCACTTCAGgATTTTTGATATATATAGCCATGCTTTCAATGACCATGTACACCCACCAAACACCATGCAGCCAAGGGAATCTTACCCTAACAGACGGCCTGAATATCTCTTCTGAAGTCCAAGCGGGGGCTGCTTTTGATCCAAAGACTCTAATTCCTCTCATCAGTGCTATGGTTATCATTTTTGGTTATGCTATGGGCTGGGGTCCAATCACATGGCTGCTAATGTCAGAGATTTTACCTTTGGGTGCGCGTGGTGTCGCATCCGGTTTGTGCGTTGGTGTTAGTTGGATCACAGCCTTCGTCCTGACGCAACTCTTCATGCACGTTGTGGTCGCCTATGGACTGTATGTACCTTTCCTGTTCTTCTGTGTGGTCTCTGTAGTGAATATAATATTCACTGCTAAATGCGTGCCGGAAACCAAAGGTCGAACTCTGGAGGAGATTGAGAACTACTTCAGGACTGGCAGAAGCTTCACCATTCATGATCCTTAA

Function

symbol description
slc2a6 Enables D-glucose transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including heart; integument; liver; pleuroperitoneal region; and yolk. Orthologous to human SLC2A6 (solute carrier family 2 member 6).

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function
GO:0055056 D-glucose transmembrane transporter activity molecular_function

KEGG:

id description
ko02000 Transporters

ZFIN:

id description
ZDB-GENE-081104-301 Enables D-glucose transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including heart; integument; liver; pleuroperitoneal region; and yolk. Orthologous to human SLC2A6 (solute carrier family 2 member 6).

Ensembl:

ensembl_id ENSDARG00000058731

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070873 False 4613 mRNA 0.37 10 12854105 12867434
TCONS_00070874 True 1404 mRNA 0.47 9 12857114 12867128

Neighbor

gene id symbol gene type direction distance location
XLOC_036254 si:dkey-104n9.1 coding downstream 6619 12843300 ~ 12847486 (-)
XLOC_036253 NA coding downstream 143881 12686691 ~ 12710224 (-)
XLOC_036251 NA coding downstream 184693 12451451 ~ 12669412 (-)
XLOC_036252 CU639468.2 coding downstream 241217 12612772 ~ 12612888 (-)
XLOC_036250 traf1 coding downstream 421420 12408840 ~ 12432685 (-)
XLOC_036256 dennd2da coding upstream 121938 12989372 ~ 13029297 (-)
XLOC_036257 si:dkey-208b23.5 coding upstream 168787 13036221 ~ 13046089 (-)
XLOC_036258 si:dkey-208b23.5 coding upstream 184857 13052291 ~ 13064330 (-)
XLOC_036259 zgc:194990 coding upstream 294246 13161680 ~ 13184989 (-)
XLOC_036260 si:ch73-61d6.3 coding upstream 322880 13190314 ~ 13211527 (-)
XLOC_036247 NA non-coding downstream 728731 12029473 ~ 12125374 (-)
XLOC_036229 FO834835.1 non-coding downstream 2414261 10439725 ~ 10439844 (-)
XLOC_036261 BX119975.1 non-coding upstream 371539 13238973 ~ 13239092 (-)
XLOC_036263 NA non-coding upstream 435245 13302679 ~ 13306048 (-)
XLOC_036277 NA non-coding upstream 847508 13714942 ~ 13716577 (-)
XLOC_036279 CT025854.2 non-coding upstream 1010294 13877728 ~ 13877845 (-)
XLOC_036286 BX248385.1 non-coding upstream 1225360 14092794 ~ 14094516 (-)

Expression


Co-expression Network