LOC100135927 (LOC106609106)


Basic Information

Item Value
gene id LOC100135927
gene name LOC106609106
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 34325210 ~ 34329578 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577588.2
TTTTTTCTTCCTGCATGTAAATATTACTTTCGTACGCTTTGGGTAGCTAATTTCCAATACATTGTTGTATATGTGTATAGACTCTGTGCTACACGTTTTAGGGATAGGAAGCTTGCTGGCAAGTGTCTAGTGTGTAACATTAACTATGATATGAAACTTCGAGTCATTCAACTGCTTTCCAGTTACTGTTGTTACCCAGAATGCTATCGTTCAATCAATTATTGTGGCTATTTTGTAGCCTAGCTTTTATTTTACTATCACAATGCACCTATGCAAAATACTTAAAAAGCTCATGTAATACCTGCAAACAGATAGCTGATAACTTCAGTAAGGGATTGGACCGAACGAAAAAGCAGAACTTTGGTGGAGGAAACACCGCTTGGGAGGAGAGGGCACTTTCCAAATATGAGACAAGtgAGATCCGCCTAGTTGAGATTCTGGAGAATCTGTGTGACAGCAGCAGCTTTGACTGTAACCACATGGTAGAGGAGCATGAGGACCACTTTGAGACCTGGTGGTTCAAGAGGCAAAATAAGCATCCTGATCTGTATAAGTGGTTTTGCGTTGATACCATCAAGGTGTGCTGTTCGACGGGAACGTTTGGCCCTGATTGTAATGCCTGTATGGGGGGTTCTGAGAGGCCTTGCCATGGCAATGGCGTGTGTGACGGTGATGGAACACGAGGGGGTAACGGCAGGTGCAACTGTGACCATGGTTACAAGGGGGAGTTCTGTCTGGACTGCATGGACGGATACTTCAATGAAATTAGGAACGACACGTTTTCACTATGCACAGAGTGCCACACCTCCTGCAAGACCTGCACTGGTATGACCAATGAGGACTGTGAGAAGTGCAAGACTGGCTGGGGGGAGGATGATGAGAGGACCTGTCTTGATGTGAACGAGTGCTTGAACGACCCTCCTCTCTGCAAAGAGGATCAGTACTGTCTGAACACGGATGGCTCGTTCTCCTGTAAAGGCTGTGACGAGTTGTGTTCAGGCTGTACTGGGGCAGGGCCTGATAAGTGCCAGAGCTGTGCTCCTGGCTACCAGGACACAGAGGGCACCTGCACAGATGTGAACGAGTGTGAGCAGACTGATGCTGTGTGTACTGCGGAGAACCAGGAGTGTTTGAACAACAAAGGAAGCTACATCTGTATCTGTGCCAGCAGGTACGAGGAACAGGAGGGAGTCTGTGTCAAAATACCAGAGCCAGAGGAGAATGAGGCAGAAATAGTGACACGTCCAGAAGAGCACGAAGACCTTTGACCTCAGGAAATGAACTAATAGGAACAAACCAGGAAGAGCATTTGGAGTAAATTGGGTGTCACCCGTGAGACTACACCCCTATAGCTCACAGCATCAGAATATATTAAGGCCACTCCCTTTAAAGCATTACGGCTACATGGCAGTTGATCACTCGACATGCATACTGCACTCTTTACAGATTTATACCTGTCGCTCATGGATGGACAGCCAACAGAATGGCTGAGAAAATTAAAGATTCAACCCCCAAGTACTCTGGTTCTTGTTTTTGCTGTGATTAACCCAAGTGTTGTCTGGTTTTTAAATTCATGCAGGATTTTGAACGTTATTCAAATAAagtttgagaacagaaatta
>XM_036957701.1
TTTTTTCTTCCTGCATGTAAATATTACTTTCGTACGCTTTGGGTAGCTAATTTCCAATACATTGTTGTATATGTGTATAGACTCTGTGCTACACGTTTTAGGGATAGGAAGCTTGCTGGCAAGTGTCTAGTGTGTAACATTAACTATGATATGAAACTTCGAGTCATTCAACTGCTTTCCAGTTACTGTTGTTACCCAGAATGCTATCGTTCAATCAATTATTGTGGCTATTTTGTAGCCTAGCTTTTATTTTACTATCACAATGCACCTATGCAAAATACTTAAAAAGCTCATGTAATACCTGCAAACAGATAGCTGATAACTTCAGTAAGGGATTGGACCGAACGAAAAAGCAGAACTTTGGTGGAGGAAACACCGCTTGGGAGGAGAGGGCACTTTCCAAATATGAGACAAGtgAGATCCGCCTAGTTGAGATTCTGGAGAATCTGTGTGACAGCAGCAGCTTTGACTGTAACCACATGGTAGAGGAGCATGAGGACCACTTTGAGACCTGGTGGTTCAAGAGGCAAAATAAGCATCCTGATCTGTATAAGTGGTTTTGCGTTGATACCATCAAGGTGTGCTGTTCGACGGGAACGTTTGGCCCTGATTGTAATGCCTGTATGGGGGGTTCTGAGAGGCCTTGCCATGGCAATGGCGTGTGTGACGGTGATGGAACACGAGGGGGTAACGGCAGGTGCAACTGTGACCATGGTTACAAGGGGGAGTTCTGTCTGGACTGCATGGACGGATACTTCAATGAAATTAGGAACGACACGTTTTCACTATGCACAGAGTGCCACACCTCCTGCAAGACCTGCACTGGTATGACCAATGAGGACTGTGAGAAGTGCAAGACTGGCTGGGGGGAGGATGATGAGAGGACCTGTCTTGATGTGAACGAGTGCTTGAACGACCCTCCTCTCTGCAAAGAGGATCAGTACTGTCTGAACACGGATGGCTCGTTCTCCTGTAAAGGCTGTGACGAGTTGTGTTCAGGCTGTACTGGGGCAGGGCCTGATAAGTGCCAGAGCTGTGCTCCTGGCTACCAGGACACAGAGGGCACCTGCACAGATGTGAACGAGTGTGAGCAGACTGATGCTGTGTGTACTGCGGAGAACCAGGAGTGTTTGAACAACAAAGGAAGCTACATCTGTATCTGTGCCAGCAGAGGAGAATGAGGCAGAAATAGTGACACGTCCAGAAGAGCACGAAGACCTTTGACCTCAGGAAATGAACTAATAGGAACAAACCAGGAAGAGCATTTGGAGTAAATTGGGTGTCACCCGTGAGACTACACCCCTATAGCTCACAGCATCAGAATATATTAAGGCCACTCCCTTTAAAGCATTACGGCTACATGGCAGTTGATCACTCGACATGCATACTGCACTCTTTACAGATTTATACCTGTCGCTCATGGATGGACAGCCAACAGAATGGCTGAGAAAATTAAAGATTCAACCCCCAAGTACTCTGGTTCTTGTTTTTGCTGTGATTAACCCAAGTGTTGTCTGGTTTTTAAATTCATGCAGGATTTTGAACGTTATTCAAATAAagtttgagaacagaaatta
>XM_036957702.1
TTTTTTCTTCCTGCATGTAAATATTACTTTCGTACGCTTTGGGTAGCTAATTTCCAATACATTGTTGTATATGTGTATAGACTCTGTGCTACACGTTTTAGGGATAGGAAGCTTGCTGGCAAGTGTCTAGTGTGTAACATTAACTATGATATGAAACTTCGAGTCATTCAACTGCTTTCCAGTTACTGTTGTTACCCAGAATGCTATCGTTCAATCAATTATTGTGGCTATTTTGTAGCCTAGCTTTTATTTTACTATCACAATGCACCTATGCAAAATACTTAAAAAGCTCATGTAATACCTGCAAACAGATAGCTGATAACTTCAGTAAGGGATTGGACCGAACGAAAAAGCAGAACTTTGGTGGAGGAAACACCGCTTGGGAGGAGAGGGCACTTTCCAAATATGAGACAAGtgAGATCCGCCTAGTTGAGATTCTGGAGAATCTGTGTGACAGCAGCAGCTTTGACTGTAACCACATGGTAGAGGAGCATGAGGACCACTTTGAGACCTGGTGGTTCAAGAGGCAAAATAAGCATCCTGATCTGTATAAGTGGTTTTGCGTTGATACCATCAAGGTGTGCTGTTCGACGGGAACGTTTGGCCCTGATTGTAATGCCTGTATGGGGGGTTCTGAGAGGCCTTGCCATGGCAATGGCGTGTGTGACGGTGATGGAACACGAGGGGGTAACGGCAGGTGCAACTGTGACCATGGTTACAAGGGGGAGTTCTGTCTGGACTGCATGGACGGATACTTCAATGAAATTAGGAACGACACGTTTTCACTATGCACAGAGTGCCACACCTCCTGCAAGACCTGCACTGGTATGACCAATGAGGACTGTGAGAAGTGCAAGACTGGCTGGGGGGAGGATGATGAGAGGACCTGTCTTGATGTGAACGAGTGCTTGAACGACCCTCCTCTCTGCAAAGAGGATCAGTACTGTCTGAACACGGATGGCTCGTTCTCCTGTAAAGGCTGTGACGAGTTGTGTTCAGGCTGTACTGGGGCAGGGCCTGATAAGTGCCAGAGCTGTGCTCCTGGCTACCAGGACACAGAGGGCACCTGCACAGGTACGAGGAACAGGAGGGAGTCTGTGTCAAAATACCAGAGCCAGAGGAGAATGAGGCAGAAATAGTGACACGTCCAGAAGAGCACGAAGACCTTTGACCTCAGGAAATGAACTAATAGGAACAAACCAGGAAGAGCATTTGGAGTAAATTGGGTGTCACCCGTGAGACTACACCCCTATAGCTCACAGCATCAGAATATATTAAGGCCACTCCCTTTAAAGCATTACGGCTACATGGCAGTTGATCACTCGACATGCATACTGCACTCTTTACAGATTTATACCTGTCGCTCATGGATGGACAGCCAACAGAATGGCTGAGAAAATTAAAGATTCAACCCCCAAGTACTCTGGTTCTTGTTTTTGCTGTGATTAACCCAAGTGTTGTCTGGTTTTTAAATTCATGCAGGATTTTGAACGTTATTCAAATAAagtttgagaacagaaatta
>XR_005038582.1
TTTTTTCTTCCTGCATGTAAATATTACTTTCGTACGCTTTGGGTAGCTAATTTCCAATACATTGTTGTATATGTGTATAGACTCTGTGCTACACGTTTTAGGGATAGGAAGCTTGCTGGCAAGTGTCTAGTGTGTAACATTAACTATGATATGAAACTTCGAGTCATTCAACTGCTTTCCAGTTACTGTTGTTACCCAGAATGCTATCGTTCAATCAATTATTGTGGCTATTTTGTAGCCTAGCTTTTATTTTACTATCACAATGCACCTATGCAAAATACTTAAAAAGCTCATGTAATACCTGCAAACAGATAGCTGATAACTTCAGTAAGGGATTGGACCGAACGAAAAAGCAGAACTTTGGTGGAGGAAACACCGCTTGGGAGGAGAGGGCACTTTCCAAATATGAGACAAGtgAGATCCGCCTAGTTGAGATTCTGGAGAATCTGTGTGACAGCAGCAGCTTTGACTGTAACCACATGGTAGAGGAGCATGAGGACCACTTTGAGACCTGGTGGTTCAAGAGGCAAAATAAGCATCCTGATCTGTATAAGTGGTTTTGCGTTGATACCATCAAGGTGTGCTGTTCGACGGGAACGTTTGGCCCTGATTGTAATGCCTGTATGGGGGGTTCTGAGAGGCCTTGCCATGGCAATGGCGTGTGTGACGGTGATGGAACACGAGGGGGTAACGGCAGGTGCAACTGTGACCATGGTTACAAGGGGGAGTTCTGTCTGGACTGCATGGACGGATACTTCAATGAAATTAGGAACGACACGTTTTCACTATGCACAGAGTGCCACACCTCCTGCAAGACCTGCACTGGTATGACCAATGAGGACTGTGAGAAGTGCAAGACTGGCTGGGGGGAGGATGATGAGAGGACCTGTCTTGATGTGAACGAGTGCTTGAACGACCCTCCTCTCTGCAAAGAGGATCAGTACTGTCTGAACACGGATGGCTCGTTCTCCTGTAAAGGCTGTGACGAGTTGTGTTCAGGCTGTACTGGGGCAGGGCCTGATAAGTGCCAGAGCTGTGCTCCTGGCTACCAGGACACAGAGGGCACCTGCACAGATGTGAACGAGTGTGAGCAGACTGATGCTGTGTGTACTGCGGAGAACCAGGAGTGTTTGAACAACAAAGGAAGCTACATCTGTATCTGTGCCAGCAGGTACGAGGAACAGGAGGGAGTCTGTGTCAAAATACCAGAGCCAGAGGAGAATGAGGCAGAAATAGTGACACGTCCAGAAGAGCACGAAGACCTTTGACCTCAGGAAATGAACTAATAGGAACAAACCAGGAAGAGCATTTGGAGTAAATTGGGAGATTTATACCTGTCGCTCATGGATGGACAGCCAACAGAATGGCTGAGAAAATTAAAGATTCAACCCCCAAGTACTCTGGTTCTTGTTTTTGCTGTGATTAACCCAAGTGTTGTCTGGTTTTTAAATTCATGCAGGATTTTGAACGTTATTCAAATAAagtttgagaacagaaatta
>XR_005038583.1
TTTTTTCTTCCTGCATGTAAATATTACTTTCGTACGCTTTGGGTAGCTAATTTCCAATACATTGTTGTATATGTGTATAGACTCTGTGCTACACGTTTTAGGGATAGGAAGCTTGCTGGCAAGTGTCTAGTGTGTAACATTAACTATGATATGAAACTTCGAGTCATTCAACTGCTTTCCAGTTACTGTTGTTACCCAGAATGCTATCGTTCAATCAATTATTGTGGCTATTTTGTAGCCTAGCTTTTATTTTACTATCACAATGCACCTATGCAAAATACTTAAAAAGCTCATGTAATACCTGCAAACAGATAGCTGATAACTTCAGTAAGGGATTGGACCGAACGAAAAAGCAGAACTTTGGTGGAGGAAACACCGCTTGGGAGGAGAGGGCACTTTCCAAATATGAGACAAGtgAGATCCGCCTAGTTGAGATTCTGGAGAATCTGTGTGACAGCAGCAGCTTTGACTGTAACCACATGGTAGAGGAGCATGAGGACCACTTTGAGACCTGGTGGTTCAAGAGGCAAAATAAGCATCCTGATCTGTATAAGTGGTTTTGCGTTGATACCATCAAGGTGTGCTGTTCGACGGGAACGTTTGGCCCTGATTGTAATGCCTGTATGGGGGGTTCTGAGAGGCCTTGCCATGGCAATGGCGTGTGTGACGGTGATGGAACACGAGGGGGTAACGGCAGGTGCAACTGTGACCATGGTTACAAGGGGGAGTTCTGTCTGGACTGCATGGACGGATACTTCAATGAAATTAGGAACGACACGTTTTCACTATGCACAGAGTGCCACACCTCCTGCAAGACCTGCACTGGTATGACCAATGAGGACTGTGAGAAGTGCAAGACTGGCTGGGGGGAGGATGATGAGAGGACCTGTCTTGATGTGAACGAGTGCTTGAACGACCCTCCTCTCTGCAAAGAGGATCAGTACTGTCTGAACACGGATGGCTCGTTCTCCTGTAAAGGCTGTGACGAGTTGTGTTCAGGCTGTACTGGGGCAGGGCCTGATAAGTGCCAGAGCTGTGCTCCTGGCTACCAGGACACAGAGGGCACCTGCACAGATGTGAACGAGTGTGAGCAGACTGATGCTGTGTGTACTGCGGAGAACCAGGAGTGTTTGAACAACAAAGGAAGCTACATCTGTATCTGTGCCAGCAGAGGAGAATGAGGCAGAAATAGTGACACGTCCAGAAGAGCACGAAGACCTTTGACCTCAGGAAATGAACTAATAGGAACAAACCAGGAAGAGCATTTGGAGTAAATTGGGAGATTTATACCTGTCGCTCATGGATGGACAGCCAACAGAATGGCTGAGAAAATTAAAGATTCAACCCCCAAGTACTCTGGTTCTTGTTTTTGCTGTGATTAACCCAAGTGTTGTCTGGTTTTTAAATTCATGCAGGATTTTGAACGTTATTCAAATAAagtttgagaacagaaatta
>XR_005038584.1
TTTTTTCTTCCTGCATGTAAATATTACTTTCGTACGCTTTGGGTAGCTAATTTCCAATACATTGTTGTATATGTGTATAGACTCTGTGCTACACGTTTTAGGGATAGGAAGCTTGCTGGCAAGTGTCTAGTGTGTAACATTAACTATGATATGAAACTTCGAGTCATTCAACTGCTTTCCAGTTACTGTTGTTACCCAGAATGCTATCGTTCAATCAATTATTGTGGCTATTTTGTAGCCTAGCTTTTATTTTACTATCACAATGCACCTATGCAAAATACTTAAAAAGCTCATGTAATACCTGCAAACAGATAGCTGATAACTTCAGTAAGGGATTGGACCGAACGAAAAAGCAGAACTTTGGTGGAGGAAACACCGCTTGGGAGGAGAGGGCACTTTCCAAATATGAGACAAGtgAGATCCGCCTAGTTGAGATTCTGGAGAATCTGTGTGACAGCAGCAGCTTTGACTGTAACCACATGGTAGAGGAGCATGAGGACCACTTTGAGACCTGGTGGTTCAAGAGGCAAAATAAGCATCCTGATCTGTATAAGTGGTTTTGCGTTGATACCATCAAGGTGTGCTGTTCGACGGGAACGTTTGGCCCTGATTGTAATGCCTGTATGGGGGGTTCTGAGAGGCCTTGCCATGGCAATGGCGTGTGTGACGGTGATGGAACACGAGGGGGTAACGGCAGGTGCAACTGTGACCATGGTTACAAGGGGGAGTTCTGTCTGGACTGCATGGACGGATACTTCAATGAAATTAGGAACGACACGTTTTCACTATGCACAGAGTGCCACACCTCCTGCAAGACCTGCACTGGTATGACCAATGAGGACTGTGAGAAGTGCAAGACTGGCTGGGGGGAGGATGATGAGAGGACCTGTCTTGATGTGAACGAGTGCTTGAACGACCCTCCTCTCTGCAAAGAGGATCAGTACTGTCTGAACACGGATGGCTCGTTCTCCTGTAAAGGCTGTGACGAGTTGTGTTCAGGCTGTACTGGGGCAGGGCCTGATAAGTGCCAGAGCTGTGCTCCTGGCTACCAGGACACAGAGGGCACCTGCACAGGTACGAGGAACAGGAGGGAGTCTGTGTCAAAATACCAGAGCCAGAGGAGAATGAGGCAGAAATAGTGACACGTCCAGAAGAGCACGAAGACCTTTGACCTCAGGAAATGAACTAATAGGAACAAACCAGGAAGAGCATTTGGAGTAAATTGGGAGATTTATACCTGTCGCTCATGGATGGACAGCCAACAGAATGGCTGAGAAAATTAAAGATTCAACCCCCAAGTACTCTGGTTCTTGTTTTTGCTGTGATTAACCCAAGTGTTGTCTGGTTTTTAAATTCATGCAGGATTTTGAACGTTATTCAAATAAagtttgagaacagaaatta

Function

NR:

description
cysteine-rich with EGF-like domain protein 2

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K24335 CRELD; protein disulfide-isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577588.2 False 1621 mRNA 0.46 10 34325210 34329578
XM_036957701.1 False 1577 mRNA 0.45 10 34325210 34329578
XM_036957702.1 False 1524 mRNA 0.45 10 34325210 34329578
XR_005038582.1 False 1501 mRNA 0.46 11 34325210 34329578
XR_005038583.1 False 1457 mRNA 0.45 11 34325210 34329578
XR_005038584.1 True 1404 mRNA 0.45 11 34325210 34329578
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110500288 LOC106609107 coding upstream 7413 34309099 ~ 34317797 (+)
LOC110500285 fam19a5 coding upstream 456194 33709461 ~ 33869016 (+)
LOC110500284 LOC106609109 coding upstream 809222 33329927 ~ 33515988 (+)
LOC110500282 LOC106609111 coding upstream 1071687 33180674 ~ 33253523 (+)
LOC110501067 LOC106609112 coding upstream 1158519 33054060 ~ 33166691 (+)
LOC110500293 LOC106609102 coding downstream 437142 34766720 ~ 34782583 (+)
LOC118942784 NA coding downstream 454835 34784413 ~ 34792564 (+)
LOC110501070 wnt7b coding downstream 588114 34917692 ~ 34931171 (+)
LOC110500295 LOC106609100 coding downstream 699681 35029259 ~ 35033416 (+)
LOC110500296 LOC106609097 coding downstream 741792 35071370 ~ 35267800 (+)
G1730746 NA non-coding upstream 14695 34310139 ~ 34310515 (+)
G1730741 NA non-coding upstream 19001 34305368 ~ 34306209 (+)
G1730742 NA non-coding upstream 22697 34301668 ~ 34302513 (+)
G1730744 NA non-coding upstream 27508 34297169 ~ 34297702 (+)
G1730861 NA non-coding downstream 50010 34379588 ~ 34379848 (+)
G1730866 NA non-coding downstream 52615 34382193 ~ 34382447 (+)
G1730956 NA non-coding downstream 175664 34505242 ~ 34558860 (+)
G1730994 NA non-coding downstream 245670 34575248 ~ 34580030 (+)
G1730999 NA non-coding downstream 253629 34583207 ~ 34583466 (+)
G1729465 NA other upstream 1003449 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 2162818 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 2188514 32114413 ~ 32144886 (+)
G1727220 NA other upstream 2760616 31564135 ~ 31564594 (+)
G1732028 NA other downstream 1109711 35439289 ~ 35484354 (+)
G1732735 NA other downstream 1711753 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 1903544 36189389 ~ 36237829 (+)
G1733187 NA other downstream 2427411 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 2919049 37248296 ~ 37314293 (+)

Expression

LOC100135927(LOC106609106) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 60.
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LOC100135927(LOC106609106) Expression in each Bioproject

Bar chart with 21 bars.
LOC100135927(LOC106609106) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 2000.
End of interactive chart.

Co-expression Network