LOC118942784


Basic Information

Item Value
gene id LOC118942784
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 34784413 ~ 34792564 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038436.1
GTCAACTTCCTGTTCACATGTGGTCAAAGACACTAATCTGAGAGCCCCCAGAGTACCATTGGACCACGTTGAAGGATTGCTGTCAGGATGGGAGTGGCCGAGCTCTGGGTGAACAAGACTGTACACTCCTCCCTCTAATCGCTGCCTCTCACATCTGCAAGATAGCTCAGGAGCAGAGTTGTTCGACTGTAGTAGGGGACAAATTGTTTACCAGCGGCATCAACCTGGCCAAAGAACATGGGGACCCCTGTGAAACAAAGACTACCAagACCAGGCTGAATTGAAACCTTCACCTTGTGATCCACTGAAGTCACCGGCTAATGGTCCATGCAAAGGTCAGGAATCTCTGATTCAGTCAGTTATGTATATTTGAGCCTGTTTATTTTCTATTACAGTTCTGCCAAGCATACAATACACTTTTTGTTGCATGAGTAATTTAATGTATTTCTATACAATTAAAAACTTTAAAATGCTATTCGGAGAAGagcaaaaacaagcaaaaatgaCCTGTCATTATCAGCCAGGCTGTAACGATCGTTGTTAgaaggattggaccaaggtgcagcgcggAAGGCGTTCATCATGATTATtaatgtgaaccagcaacaaaacaataaagcgtAACAAAATGAAAGTGCAGCTTTGTAGTGCAAAAAGgcgacaatacaaaaacaagatcccacgcacaacaggt

Function

NR:

description
PREDICTED: fibulin-1 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038436.1 True 694 mRNA 0.43 4 34784413 34792564

Neighbor

gene id symbol gene type direction distance location
LOC110500293 LOC106609102 coding upstream 1830 34766720 ~ 34782583 (+)
LOC100135927 LOC106609106 coding upstream 454835 34325210 ~ 34329578 (+)
LOC110500288 LOC106609107 coding upstream 466616 34309099 ~ 34317797 (+)
LOC110500285 fam19a5 coding upstream 915397 33709461 ~ 33869016 (+)
LOC110500284 LOC106609109 coding upstream 1268425 33329927 ~ 33515988 (+)
LOC110501070 wnt7b coding downstream 125128 34917692 ~ 34931171 (+)
LOC110500295 LOC106609100 coding downstream 236695 35029259 ~ 35033416 (+)
LOC110500296 LOC106609097 coding downstream 278806 35071370 ~ 35267800 (+)
sh2d1ab sh21a coding downstream 711127 35503671 ~ 35510121 (+)
LOC118942786 NA coding downstream 844023 35636587 ~ 35637138 (+)
G1731259 NA non-coding upstream 9796 34774292 ~ 34774617 (+)
G1731250 NA non-coding upstream 22014 34762136 ~ 34762399 (+)
G1731245 NA non-coding upstream 27847 34756304 ~ 34756566 (+)
G1731045 NA non-coding upstream 128216 34655855 ~ 34656197 (+)
G1731044 NA non-coding upstream 129745 34654418 ~ 34654668 (+)
G1731353 NA non-coding downstream 7012 34799576 ~ 34799946 (+)
G1731373 NA non-coding downstream 27430 34819994 ~ 34820259 (+)
G1731545 NA non-coding downstream 173928 34966492 ~ 34966722 (+)
G1731601 NA non-coding downstream 191285 34983849 ~ 34984050 (+)
G1731605 NA non-coding downstream 196187 34988751 ~ 34989001 (+)
G1729465 NA other upstream 1462652 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 2622021 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 2647717 32114413 ~ 32144886 (+)
G1727220 NA other upstream 3219819 31564135 ~ 31564594 (+)
G1732028 NA other downstream 646725 35439289 ~ 35484354 (+)
G1732735 NA other downstream 1248767 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 1440558 36189389 ~ 36237829 (+)
G1733187 NA other downstream 1964425 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 2456063 37248296 ~ 37314293 (+)

Expression


Co-expression Network