LOC118942786


Basic Information

Item Value
gene id LOC118942786
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 35636587 ~ 35637138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038438.1
caataaagctgGGGACAAGGCATCTGGCCGCAAAACGCTCTGGCCATAAGTGTGCCACCAAGGAGCATGTCCAGACGGGCACCAAACAACAGGAAGAGCAATCGACCGTTCATCAACAGGGTGACCAATTCCAACAGTCTCTGTCTGAGAAACACCCCAGCAGGGATGATGAATTGGAGAATAGAGTGAAGCAACTGTGGGCAATGTCTTCGGATGGAGTGGACAGGGCAACCGCACGATTTTTGTTGGAGGGATCCGTTGCCATCCTGCAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562025

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038438.1 True 272 mRNA 0.53 3 35636587 35637138

Neighbor

gene id symbol gene type direction distance location
sh2d1ab sh21a coding upstream 126466 35503671 ~ 35510121 (+)
LOC110500296 LOC106609097 coding upstream 368787 35071370 ~ 35267800 (+)
LOC110500295 LOC106609100 coding upstream 603171 35029259 ~ 35033416 (+)
LOC110501070 wnt7b coding upstream 705416 34917692 ~ 34931171 (+)
LOC118942784 NA coding upstream 844023 34784413 ~ 34792564 (+)
LOC110500322 LOC106609072 coding downstream 151353 35788491 ~ 35982905 (+)
sepsecs sepsecs coding downstream 362683 35999821 ~ 36039069 (+)
lgi2a LOC106609075 coding downstream 420978 36058116 ~ 36094464 (+)
LOC118942923 NA coding downstream 483378 36120516 ~ 36123923 (+)
LOC110500325 ppp2r5b coding downstream 552251 36189389 ~ 36237829 (+)
G1732250 NA non-coding upstream 15136 35621220 ~ 35621451 (+)
G1732248 NA non-coding upstream 21980 35614403 ~ 35614607 (+)
G1732246 NA non-coding upstream 23162 35613087 ~ 35613425 (+)
G1732241 NA non-coding upstream 31547 35604821 ~ 35605040 (+)
G1732207 NA non-coding upstream 52387 35583974 ~ 35584200 (+)
G1732307 NA non-coding downstream 25454 35662592 ~ 35662851 (+)
G1732308 NA non-coding downstream 26416 35663554 ~ 35663953 (+)
G1732309 NA non-coding downstream 28257 35665395 ~ 35665595 (+)
G1732317 NA non-coding downstream 33659 35670797 ~ 35672386 (+)
G1732319 NA non-coding downstream 36037 35673175 ~ 35673657 (+)
G1732028 NA other upstream 152233 35439289 ~ 35484354 (+)
LOC110500285 fam19a5 other upstream 1767610 33709461 ~ 33869016 (+)
G1729465 NA other upstream 2314826 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 3474195 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 3499891 32114413 ~ 32144886 (+)
G1732735 NA other downstream 404193 36041331 ~ 36042488 (+)
G1733187 NA other downstream 1119851 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 1611489 37248296 ~ 37314293 (+)
G1734420 NA other downstream 1733819 37370957 ~ 37371667 (+)

Expression


Co-expression Network