LOC110500325 (ppp2r5b)


Basic Information

Item Value
gene id LOC110500325
gene name ppp2r5b
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 36189389 ~ 36237829 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577634.2
ACCATAACGGCTAGGCTTACTAACTGGGTTAATACAGATGATTACATCATAAACATTGCGCGTGCAGACACCAGGCACTAGAACGCATGCAGTGACCGGTTGCGCAATTGAGAGTGAGAAACTGGGTTAGAATAAACGGAGGAGCTGAAGAAGGAAGGGATGAACAATGGTTTACCTCGTCTGTAGACACTATCAGCCTCAAACTAATGTAGACACgcacagaggggaggaaagaaaggggtgaaggaggaagacagagggaggagagaatggcACAGTCACATAGAGACAGTGGTGAACAATCGGTGGACGAAGCCTAGCTAAAGAAACAGAAGGATAGGACAGGAGGTCGGATAAAAGGGATAAACTATGTTCTTTTTTATTTAAAGATGGGGAGTGAAAGAGGGAGTGTTCGCCCTCGGCGTCATAACGCATCCATAGATTAGCCCAAACCAAACGCTCCACCGCCCGTCCATGGCGTAAAGACTGGGGTACATAAATATATCTGAAATAATTAAATAATTCGCTGTGGCGAGAAGAGCGTCAGCCGCAGTGTGTCTCTCCTTGCACCACGTAAGCGCAGCCGAAACCGAGACGAGGACagggaggacggagagagagaacaagccaTCCCTTTCCTAGCCGAACCAAGGAGAGAGGAAACGCGACAGGCAGACAACAATGGGAACATAGGTCTATATATACCTAAACCATCTGTGAGCAACCAGCACAGCGGAGGTTTTTGTGGTGTTTTTAGCGGTTAGCTATAAAGGAGACCGGGGATTCGGTGTTGCAGCGGCCGCGCTGAAGAACCGCACATGTCAACACGTTCAAGCTCCACATCTCCATCCCCGCCCTGCGCGGATCGCAGATCCGTCTAACGGCAACGCCAGGCAGGTTACCGAATAACGGAACCGTTAACGGAACCGGAGAACAGTGATGAGAAGGACTCGGATCAATGGTTTTATGATATGAGCCTTTATAAACGAATCAATTAATGAATTACTTATCATCGATGAGAAAGGACCAATCAAACAACTGATTTTATGGATTAATGTTGACATTTTCAGAATGATCCCTATAACCTGCTTTATCGGTGTGATGTGCTTTATCTAAGGATCTATAGGCTATGGGCTCTATTCATGACAgaaatatatacataaataccacaTTTAGGCTGATGACTTAGTAGTAGTCTTAACAACCCATGCGTTTCTTCCTATCTCTATCGATAGATACATGGACAATTAGGCCTACCCGTTAGATCTATGCGTTTGTCTTTGCATAAAAATATGTTTCGGTTAATTTAAAAACGAGTGAAGCAACCGTTTTTTCCTCCCTCTGCTGTATTGAGACGttaggcagcaggcaggcaggcagtcacaagcaacacacacaccatccgTCCCTCTGTGGACTGcacctctccatctatatcccttcctcccccctctatcccccctcctctaatcctccccatccctctgttCCATTCCCAGAttatcattttttattaatttgttaacGTATTAGCTCTTTTAAGGATTAAAAACTGTTCACCCTATCTCAATCCTATACGCCTCTCCTTCACTAGCATCTCATCGGCGcatccagacacagacacacaaacgtGACATACACACCGGACAGCTCGCCAATACAACACAGCAGCGATGGAGACAACTAAACTGCCCCCGACCAGCCCGTCCTCTCCGACCACCGGGTTCTCGGTACCGTCAGCGGAGAAGGTGGATGGGTTTCCCCGGCGCTCGATGCGTAGAGCCCGGCAGAGGCGCTCCCACTCCTCGTCCCAGTTCCGCTATCAGAGCTCCCAGGTCGAGCTAACGCCACTGCCGCTGCTCAAAGATGCCCCTGTGGCAGAGCTCCATGACCTGTTCTGTAAGAAGCTGCAGCAGTGCTGCGTCCTCTTTGACTTCCTGGACTGTGTGGCTGACCTGAAGGGGAAAGAGATCAAACGAGCTGCGCTCAACGAACTGGTGGAGTCTGTTGCTACAAGCAGAGGAGTTCTGATAGAGCCACTCTACCCAGAGGCTATTAAaatgATCTCAGTGAATATCTTCAGGACATTACCTCCCAGTGAGAACCCAGAGTTTGACCCGGAGGAGGATGAACCCACTCTAGAGGCCTCCTGGCCACACCTGcagCTGGTGTATGAATTCTTTCTGCGTTTCCTGGAGAGCCCAGACTTCCAGCCCTCCATGGCCAAACGCTACGTTGACCAGAAGTTTGTTCTTCAGcTGTTGGAattgtttgacagtgaggatccgagggagagagagtaccTAAAGACCATCCTGCATCGTGTCTACGGCAAACTGCTcggcctgcgggcatacatacGCAAACAGATCAACAATATCTTCCTCAGGTTTATCTATGAGACCGAGCACTTCAACGGTGTGGCAGAGCTACTGGAGATCCTGGGCAGcatTATAAACGGGTTTGCTCTGCCCTTGAAGTCGGAACACAAGCAGTTCCTGGTTCGAGTCCTGATACCTCTACACACAGCCAAGTCTCTGTCCATTTTCCATGCACAGCTGGCGTACTGTGTGGTCCAGTTTATGGAGAAAGATTCTACTGTCACAGAATACATCATACGAGGGCTCCTCAAATACTGGCCCAAAACCTGCACCCAGAAAGAGGTGATGTTCctaggggagatagaggagatacTGGATGTGATCGAGCCATCTCAGTTTATCCGTGTTCAGGAGCCTCTCTTCAAACAGATTGCTGCCTGCATCTCCAGCCCACACTTCcagGTAGCAGAGAGGGCCTTGTACTTCTGGAACAACGAGTACATCCTGTCTCTGATAGAGGAGAACTGTCAGGTGATTCTACCGCTGGTCTTCGCCACACTCTACAGAGTGTCCAAGGAGCACTGGAACCAgactATAGTCTCTCTGATCTACAACGTTCTGAAGACCTTTATGGAGATGAACAGCAAGCTGTTTGATGACCTCACTGCCTCTTACAAAGTGGAAAAACAGAAGTGAGCGGAGTTGAAGAGGGAGTGTGAGCGTGCAGAGCTGTGGCGGGGGCTGGATGAGCAGCAGGAGAGGAGACTGCAGATCCTGGGGGAGGCCAGTCGCAATCAGAAGAACCtccaggagagaggggagcctcCTCAGCCCAC
>XM_021577633.2
ACCATAACGGCTAGGCTTACTAACTGGGTTAATACAGATGATTACATCATAAACATTGCGCGTGCAGACACCAGGCACTAGAACGCATGCAGTGACCGGTTGCGCAATTGAGAGTGAGAAACTGGGTTAGAATAAACGGAGGAGCTGAAGAAGGAAGGGATGAACAATGGTTTACCTCGTCTGTAGACACTATCAGCCTCAAACTAATGTAGACACgcacagaggggaggaaagaaaggggtgaaggaggaagacagagggaggagagaatggcACAGTCACATAGAGACAGTGGTGAACAATCGGTGGACGAAGCCTAGCTAAAGAAACAGAAGGATAGGACAGGAGGTCGGATAAAAGGGATAAACTATGTTCTTTTTTATTTAAAGATGGGGAGTGAAAGAGGGAGTGTTCGCCCTCGGCGTCATAACGCATCCATAGATTAGCCCAAACCAAACGCTCCACCGCCCGTCCATGGCGTAAAGACTGGGGTACATAAATATATCTGAAATAATTAAATAATTCGCTGTGGCGAGAAGAGCGTCAGCCGCAGTGTGTCTCTCCTTGCACCACGTAAGCGCAGCCGAAACCGAGACGAGGACagggaggacggagagagagaacaagccaTCCCTTTCCTAGCCGAACCAAGGAGAGAGGAAACGCGACAGGCAGACAACAATGGGAACATAGGTCTATATATACCTAAACCATCTGTGAGCAACCAGCACAGCGGAGGTTTTTGTGGTGTTTTTAGCGGTTAGCTATAAAGGAGACCGGGGATTCGGTGTTGCAGCGGCCGCGCTGAAGAACCGCACATGTCAACACGTTCAAGCTCCACATCTCCATCCCCGCCCTGCGCGGATCGCAGATCCGTCTAACGGCAACGCCAGGCAGGTTACCGAATAACGGAACCGTTAACGGAACCGGAGAACAGTGATGAGAAGGACTCGGATCAATGGTTTTATGATATGAGCCTTTATAAACGAATCAATTAATGAATTACTTATCATCGATGAGAAAGGACCAATCAAACAACTGATTTTATGGATTAATGTTGACATTTTCAGAATGATCCCTATAACCTGCTTTATCGGTGTGATGTGCTTTATCTAAGGATCTATAGGCTATGGGCTCTATTCATGACAgaaatatatacataaataccacaTTTAGGCTGATGACTTAGTAGTAGTCTTAACAACCCATGCGTTTCTTCCTATCTCTATCGATAGATACATGGACAATTAGGCCTACCCGTTAGATCTATGCGTTTGTCTTTGCATAAAAATATGTTTCGGTTAATTTAAAAACGAGTGAAGCAACCGTTTTTTCCTCCCTCTGCTGTATTGAGACGttaggcagcaggcaggcaggcagtcacaagcaacacacacaccatccgTCCCTCTGTGGACTGcacctctccatctatatcccttcctcccccctctatcccccctcctctaatcctccccatccctctgttCCATTCCCAGAttatcattttttattaatttgttaacGTATTAGCTCTTTTAAGGATTAAAAACTGTTCACCCTATCTCAATCCTATACGCCTCTCCTTCACTAGCATCTCATCGGCGcatccagacacagacacacaaacgtGACATACACACCGGACAGCTCGCCAATACAACACAGCAGCGATGGAGACAACTAAACTGCCCCCGACCAGCCCGTCCTCTCCGACCACCGGGTTCTCGGTACCGTCAGCGGAGAAGGTGGATGGGTTTCCCCGGCGCTCGATGCGTAGAGCCCGGCAGAGGCGCTCCCACTCCTCGTCCCAGTTCCGCTATCAGAGCTCCCAGGTCGAGCTAACGCCACTGCCGCTGCTCAAAGATGCCCCTGTGGCAGAGCTCCATGACCTGTTCTGTAAGAAGCTGCAGCAGTGCTGCGTCCTCTTTGACTTCCTGGACTGTGTGGCTGACCTGAAGGGGAAAGAGATCAAACGAGCTGCGCTCAACGAACTGGTGGAGTCTGTTGCTACAAGCAGAGGAGTTCTGATAGAGCCACTCTACCCAGAGGCTATTAAaatgATCTCAGTGAATATCTTCAGGACATTACCTCCCAGTGAGAACCCAGAGTTTGACCCGGAGGAGGATGAACCCACTCTAGAGGCCTCCTGGCCACACCTGcagCTGGTGTATGAATTCTTTCTGCGTTTCCTGGAGAGCCCAGACTTCCAGCCCTCCATGGCCAAACGCTACGTTGACCAGAAGTTTGTTCTTCAGcTGTTGGAattgtttgacagtgaggatccgagggagagagagtaccTAAAGACCATCCTGCATCGTGTCTACGGCAAACTGCTcggcctgcgggcatacatacGCAAACAGATCAACAATATCTTCCTCAGGTTTATCTATGAGACCGAGCACTTCAACGGTGTGGCAGAGCTACTGGAGATCCTGGGCAGcatTATAAACGGGTTTGCTCTGCCCTTGAAGTCGGAACACAAGCAGTTCCTGGTTCGAGTCCTGATACCTCTACACACAGCCAAGTCTCTGTCCATTTTCCATGCACAGCTGGCGTACTGTGTGGTCCAGTTTATGGAGAAAGATTCTACTGTCACAGAATACATCATACGAGGGCTCCTCAAATACTGGCCCAAAACCTGCACCCAGAAAGAGGTGATGTTCctaggggagatagaggagatacTGGATGTGATCGAGCCATCTCAGTTTATCCGTGTTCAGGAGCCTCTCTTCAAACAGATTGCTGCCTGCATCTCCAGCCCACACTTCcagGTAGCAGAGAGGGCCTTGTACTTCTGGAACAACGAGTACATCCTGTCTCTGATAGAGGAGAACTGTCAGGTGATTCTACCGCTGGTCTTCGCCACACTCTACAGAGTGTCCAAGGAGCACTGGAACCAgactATAGTCTCTCTGATCTACAACGTTCTGAAGACCTTTATGGAGATGAACAGCAAGCTGTTTGATGACCTCACTGCCTCTTACAAAGTGGAAAAACAGAAGGAGTTGAAGAGGGAGTGTGAGCGTGCAGAGCTGTGGCGGGGGCTGGATGAGCAGCAGGAGAGGAGACTGCAGATCCTGGGGGAGGCCAGTCGCAATCAGAAGAACCtccaggagagaggggagcctcCTCAGCCCACCTCCACACTGACGGCATTCCCTGAGCAGCCAAACCTCGAGCTCAGCGGAGCCTCTTCTAATACCTAGAACCAGACAGCGGAGGATCAGTACCAGGATACATAGAGTACTTAGAGGACATACAGAGACAGTATGCACATagccaaacacacacatgtacacacaaaggAGCAGACGCacacgctcaaacacacacacacacacacacacacacacacactgacaacgtacacataaacacatacagagtCGCACACAGGCATAtactgtttacacacacacacacactcatgcagaaTGTAAACAAAAGTTGAATCAACTCAAACACATAGACTACATTGAAGTGCAAACACAGCCCTCTACATACTCACTGGAAGACTACCCACACAAACTGCCCATCTTGAACAagacatatttctctctctctctcacactcactcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcactcacacaggtACTGGTTCTAGCTGTCTAGGTTTTGACGTGGAACCGTTTTCCCGGTTCTCCGACAAAGGACTTTATACCGTCCCAAAAGATACAGAGGAATGATGACGTGAATGCTACATAATATTGTTGCTTCTTCTTCTATTCTtctctactgtactactactactactactactgatgtttttatatatatatatatatatatatatatatgtctgaatattatgattattatagTGTTGGTGGGAGAATCTTTAGTGTAGAACTCCTAAAACTTTAGCATAACTTGAGCATGgtccaaatcacaccctattcgcTACAGAGCGAGTGCACTATTGGCCAAATGTAGTACACTATATGGGGCCTAATCCCCATATTGTAGTGCAATACTACTGACCAAACGCAGTGCACTATAATGGGGAAAGGGGtcacttcccaaatggcaccctattccctacatagtgcactacttttgacaagcgccctatggaccctggtcaaaagtagtgcactatttagggaacagggtgccatttgggacgtaccaAGTGTATGATTTTGGGTGACCCCTAATCTCCTAAACTAAAACAATGTTCTGATATGTTATTATTCTTGTCCATTCATAATTGGGcatagagagaaggaagagagtcAGAAAACCAAGTTTTTCTAGTAATATTCTAATTTGTTTTGGATAATGTTTGTATTGGgcgtgtcctaaatggcaccattttccctatgaagtgcactacttagCACTACTTactacagtagtacactatatagggaatagggtgccatttgggatgtgagCTCAGTCTACCATCTGTGGGATCAGTCTACTAGTCCTTGATATCACACTGTCTTACTGTTCTTCTGTGCATCTTATCTTCATTCGTTTGATGAAATTATTTTGAATTTGTTTTAATAtttttatgtttttgtgtgtTCATTTTGGCAATATCTGATATttatgatatttttttatttgatctcTGGAATTGTGACCTTATTGCAGGAAGTTGGCAAAGATgagacgtgtttgtgtgtgtgtgtgtgtgtgtgagagagagatggagaggtcaTGGAAGTGTatgcgtgtatgcgtgtgtgttcatgtgtgtaagATGCAGAGGTGATGgaagtgtttgtgtgagagaatTCAGTATGAGTGTAACAGTGACAGGAGATGTGTAGGgacagagtgatagagggagagaggtggcatcgatccctctttctctcttctctcccattctctccttTCGTAGGAACAGGATTTGAATCAGAATGTAACACTTTTGATTGATTGTGAATCTGGAGGTTTTTCTTGCGTCTTGTTACCAAGACAACCAGACCAGCAGCCTTCAACACTCCTTTAACAGTTTTTAgtttcaacaaaacaaaaaaggacATAAAGAAACAAACCTCACTATCGTTAAAACACTTCCTGAATTTTGCAAGTTACCCATAATTCCCCCatttgtcagtcagtcagttcgcTGGGAAAATAATCTTCCCTTCCactattctgttctagaacaagAAGAATCCTTCCGGAAATCGGGAATGCTGGAATTGGAACGCAATTTATCAACTGAAAGAAGAGGTTCCCGTCAGTAGAATTATAGAACAGCAATAATAATGGAATTGAATATGTACGCATAAGTAGCATTGCTAAACTACAATTGCAGTGTCCTCCTGGTCTGGTTTGTAGGCTATCCGTGCTCAGAAACATAGAAACGATTGAGGATGACCATGTATTTTTTTTTCCGGGGACCAACAGCTGGGTAGATGAATGTACAGTCAAGTTAAACCGGGATTGTAGAAAGGAAAAGATGATGTGTTAAATTAACTTCACTTTGAGAAAACaa
>TU1984576
tcttccttccttctccctcactacttctctctctctccatccctttctctctctatctccctccatccctttctctccctctccttctccctccctctctccatctctctctccctccctgctgtaGGTAGCAGAGAGGGCCTTGTACTTCTGGAACAACGAGTACATCCTGTCTCTGATAGAGGAGAACTGTCAGGTGATTCTACCGCTGGTCTTCGCCACACTCTACAGAGTGTCCAAGGAGCACTGGAACCAgactATAGTCTCTCTGATCTACAACGTTCTGAAGACCTTTATGGAGATGAACAGCAAGCTGTTTGATGACCTCACTGCCTCTTACAAAGTGGAAAAACAGAAGGAGTTGAAGAGGGAGTGTGAGCGTGCAGAGCTGTGGCGGGGGCTGGATGAGCAGCAGGAGAGGAGACTGCAGATCCTGGGGGAGGCCAGTCGCAATCAGAAGAACCtccaggagagaggggagcctcCTCAGCCCACCTCCACACTGACGGCATTCCCTGAGCAGCCAAACCTCGAGCTCAGCGGAGCCTCTTCTAATACCTAGAACCAGACAGCGGAGGATCAGTACCAGGATACATAGAGTACTTAGAGGACATACAGAGACAGTATGCACATagccaaacacacacatgtacacacaaaggAGCAGACGCacacgctcaaacacacacacacacacacacacacacacacactgacaacgtacacataaacacatacagagtCGCACACAGGCATAtactgtttacacacacacacacactcatgcagaaTGTAAACAAAAGTTGAATCAACTCAAACACATAGACTACATTGAAGTGCAAACACAGCCCTCTACATACTCACTGGAAGACTACCCACACAAACTGCCCATCTTGAACAagacatatttctctctctctctcacactcactcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcactcacacaggtACTGGTTCTAGCTGTCTAGGTTTTGACGTGGAACCGTTTTCCCGGTTCTCCGACAAAGGACTTTATACCGTCCCAAAAGATACAGAGGAATGATGACGTGAATGCTACATAATATTGTTGCTTCTTCTTCTATTCTtctctactgtactactactactactactactgatgtttttatatatatatatatatatatatatatatgtctgaatattatgattattatagTGTTGGTGGGAGAATCTTTAGTGTAGAACTCCTAAAACTTTAGCATAACTTGAGCATGgtccaaatcacaccc

Function

symbol description
ppp2r5b Predicted to enable protein phosphatase regulator activity. Predicted to act upstream of or within signal transduction. Predicted to be part of protein phosphatase type 2A complex. Orthologous to human PPP2R5B (protein phosphatase 2 regulatory subunit B'beta).

NR:

description
serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577634.2 False 3157 mRNA 0.49 13 36189389 36235398
XM_021577633.2 False 5582 mRNA 0.46 13 36189389 36237829
TU1984576 True 1362 TUCP 0.46 3 36233122 36236265

Neighbor

gene id symbol gene type direction distance location
LOC118942923 NA coding upstream 65466 36120516 ~ 36123923 (+)
lgi2a LOC106609075 coding upstream 94925 36058116 ~ 36094464 (+)
sepsecs sepsecs coding upstream 150320 35999821 ~ 36039069 (+)
LOC110500322 LOC106609072 coding upstream 206484 35788491 ~ 35982905 (+)
LOC118942786 NA coding upstream 552251 35636587 ~ 35637138 (+)
LOC110500327 NA coding downstream 168170 36405999 ~ 36407509 (+)
LOC110500329 LOC106609084 coding downstream 188311 36426140 ~ 36457797 (+)
si:dkey-183c6.8 LOC106609082 coding downstream 285542 36523371 ~ 36588040 (+)
LOC110500825 LOC106609032 coding downstream 428782 36666611 ~ 36756612 (+)
htr2cl1 LOC106609050 coding downstream 978376 37216205 ~ 37242879 (+)
G1732722 NA non-coding upstream 203119 35985967 ~ 35986270 (+)
G1732467 NA non-coding upstream 305637 35866094 ~ 35883752 (+)
G1732338 rpl34 non-coding upstream 453419 35685557 ~ 35735970 (+)
G1732336 NA non-coding upstream 505217 35683917 ~ 35684172 (+)
G1732334 NA non-coding upstream 506293 35682873 ~ 35683096 (+)
G1733069 NA non-coding downstream 297005 36534834 ~ 36549893 (+)
G1733094 NA non-coding downstream 336507 36574336 ~ 36576894 (+)
G1733056 NA non-coding downstream 351734 36589563 ~ 36590879 (+)
G1733115 NA non-coding downstream 372465 36610294 ~ 36610497 (+)
G1733116 NA non-coding downstream 372787 36610616 ~ 36610846 (+)
G1732735 NA other upstream 146901 36041331 ~ 36042488 (+)
G1732028 NA other upstream 705035 35439289 ~ 35484354 (+)
LOC110500285 fam19a5 other upstream 2320412 33709461 ~ 33869016 (+)
G1729465 NA other upstream 2867628 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 4026997 32153116 ~ 32162456 (+)
G1733187 NA other downstream 519160 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 1010798 37248296 ~ 37314293 (+)
G1734420 NA other downstream 1133128 37370957 ~ 37371667 (+)
G1734479 NA other downstream 1327599 37565428 ~ 37568953 (+)
cited1 LOC106609035 other downstream 1522506 37758759 ~ 37765562 (+)

Expression


Co-expression Network