Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110500327 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 36405999 ~ 36407509 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002470086.2 | True | 1064 | mRNA | 0.45 | 2 | 36405999 | 36407509 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500325 | ppp2r5b | coding | upstream | 168170 | 36189389 ~ 36237829 (+) |
| LOC118942923 | NA | coding | upstream | 282076 | 36120516 ~ 36123923 (+) |
| lgi2a | LOC106609075 | coding | upstream | 311535 | 36058116 ~ 36094464 (+) |
| sepsecs | sepsecs | coding | upstream | 366930 | 35999821 ~ 36039069 (+) |
| LOC110500322 | LOC106609072 | coding | upstream | 423094 | 35788491 ~ 35982905 (+) |
| LOC110500329 | LOC106609084 | coding | downstream | 18631 | 36426140 ~ 36457797 (+) |
| si:dkey-183c6.8 | LOC106609082 | coding | downstream | 115862 | 36523371 ~ 36588040 (+) |
| LOC110500825 | LOC106609032 | coding | downstream | 259102 | 36666611 ~ 36756612 (+) |
| htr2cl1 | LOC106609050 | coding | downstream | 808696 | 37216205 ~ 37242879 (+) |
| zgc:109889 | LOC100194703 | coding | downstream | 840787 | 37248296 ~ 37314293 (+) |
| G1732722 | NA | non-coding | upstream | 419729 | 35985967 ~ 35986270 (+) |
| G1732467 | NA | non-coding | upstream | 522247 | 35866094 ~ 35883752 (+) |
| G1732338 | rpl34 | non-coding | upstream | 670029 | 35685557 ~ 35735970 (+) |
| G1732336 | NA | non-coding | upstream | 721827 | 35683917 ~ 35684172 (+) |
| G1732334 | NA | non-coding | upstream | 722903 | 35682873 ~ 35683096 (+) |
| G1733069 | NA | non-coding | downstream | 127325 | 36534834 ~ 36549893 (+) |
| G1733094 | NA | non-coding | downstream | 166827 | 36574336 ~ 36576894 (+) |
| G1733056 | NA | non-coding | downstream | 182054 | 36589563 ~ 36590879 (+) |
| G1733115 | NA | non-coding | downstream | 202785 | 36610294 ~ 36610497 (+) |
| G1733116 | NA | non-coding | downstream | 203107 | 36610616 ~ 36610846 (+) |
| G1732735 | NA | other | upstream | 363511 | 36041331 ~ 36042488 (+) |
| G1732028 | NA | other | upstream | 921645 | 35439289 ~ 35484354 (+) |
| LOC110500285 | fam19a5 | other | upstream | 2537022 | 33709461 ~ 33869016 (+) |
| G1729465 | NA | other | upstream | 3084238 | 33321453 ~ 33321761 (+) |
| G1733187 | NA | other | downstream | 349480 | 36756989 ~ 36760221 (+) |
| G1734420 | NA | other | downstream | 963448 | 37370957 ~ 37371667 (+) |
| G1734479 | NA | other | downstream | 1157919 | 37565428 ~ 37568953 (+) |
| cited1 | LOC106609035 | other | downstream | 1352826 | 37758759 ~ 37765562 (+) |
