si:dkey-183c6.8 (LOC106609082)


Basic Information

Item Value
gene id si:dkey-183c6.8
gene name LOC106609082
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 36523371 ~ 36588040 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577638.2
AGGAAATAGTATCCTCCATTCCTCACACCTTGCATTTGCTTGCAGGAGGTGAGTGCGCCTGTGCGGGGGTTGAGCTAGCTGAGCAGGGAGAGCCAGCCGTGGCGGCACAGATGGAAAGGATGGAAATGGAGAACTACTCCGGCGCCTGACCTGAGACGGTACTTGGAAACGTTCGGTAGGCTAGGCTACTGCTCCGCTCGGTTGGATTGCCGGAGAGAGGCGAAGCGCACGGTGAAAGCAGGGGCGACACAGACAGAAAAGATGGACGGGAGAAGCGAGTTCCTTTGCGGGGTTGTGGAAGGGTTCTATGGGAGGCCCTGGTCTATGGAGCAGAGGAAGGTCCTTTTCCAGTGGATGCAGAGGTGGGAGTTGAACACCTATCTGTACGGTCCTAAAGATGATCTGAAACACAGACTACTCTGGAGAGAGGTCTACTCCCCTGAAGAGGAGGACATTGTCTTCTCTTCTTCCTGCGACCTCTCCCTGCTTAAACGCAAGCTACGACAGgtgTCAAAGTTGGGTTGCCAGGCATTTGCGATCCTTTTTGATGACATAGACCACTCCCTGTGTCAGGCTGACAGTCAAGCCTTCTCCTCATTCGCTCACGCCCAGGTTTCAGTTGCCAATGAGATCTACCGATTCCTGGGAGAGCCGCCCGTCTTCCTGTTTTGTCCAACAGaGTACTGTGGCTCTCTATGTTCTCCCAGTGTATCTAAGTCTCCATATTTGATGACTGTTGGAGAGGACCTGCTGCCTAACATCTCTATCATATGGACCgGTAGTAAGGTAATCTCTAGAGAGCTGAGTGTAGAGGGTCTGTCTGAAGTACAGTCTGTCCTACAGCGCCCACCTCTGGTGTGGGACAACCTGCATGCAAATGACTACGACTCCAGACGTCTCTTCCTGGGTCCCTTCAAGGGTCGCTACCCCCAGCTTGCCACCCAACTCAGGGGCTTGCTACTTAACCCCAACTGTGAGTTCGAGGCCAACTACATACCCCTGCACACGCTGGGGACTTGGTACCGCactgggaggaaggagaagaaggATGAGGAGCACCAGTACTGTCCAGAGATGGCGCTGTCTACTGCACTGCACGACTGGATGGAAGAGCTCAGCCAACCACTGCagccagGTCGCCAGAGCAGACAGGCAGACCAGAGGTCATCGGGTCAAAAGTTGGGGACCCTAGAGAGTGAAAACTGTCTCCCCACCACCAGAGAAGGTCGCCCTAAACCCCCTAGAGAACCTCCGCAGGGGGACAGCCCTCCCCCCTCCAGCcctgagggagaggaaggggtgaggaggggggagaaagaaggaaggagtgagggaggagacggagaggagagagagaagaaactcCACAACAACCAGTTCCAACAAGGGCCAGGCCAGCCAAGGAGTCCAGGGGGGGTGCTGTGTGTTGAGAAGGCTCCTCTAAGCGAGTCCCAAATCCGTCTGCTGGTAGGTCTCCACTACCTTCCCCATGAGCACGGCCCATCAGCCCAGAGATTGTTACAAGACCTCACCTGGCTCAAAGAACACTGCCATCTGGTCAGCGCCAATGACAAGAAGGGACCGCCGCagaagGCGGAGGAGTGGCGTGGCCGAGCGGCTGGGTTCCTAGGTGTGTGTGAGGAGATTGCAGCGCTGCACAGTAGTGTAGTGAGTGGAGTGAGCAAGGCCGTGCTGTATGACCTTTACCCTTACGTATGGGACCTCAGAAACACTGCACTGGTGGCCAAGGCCTTCATCTGCTGGCTCGATGGGCGTGTGTTGAGTGACAGCTCTCCGTTGGGTTCCTGGAGGAACTGCTTCCACTGGTGCGGGACGACCACGGGGGCAGAGTTACTGGGGGTGGAGTCAGAACCCTGGGTGTTCAAAGGGGGAGTGTCCGGAGAGTTGCAGATGCTTCTACCTATAGGCAGTAACAGTGAACTGTTcagccaccctcctcctctcttccccacctcacGACTCTACAACATACGACCCTACCACAACAAGGACAAGGCGGAGCTGTATTGTATGGTGCGCCAGCTTCAACAGGGAGCCCAGGGGAGCCCTGATTCCAGCCCAGCACATCCTGACCTCATcggagacagGTGTCTGGGGCCCTGCCTGGCTTTGTGTCCTGAGTACAGCATGGTGCTGGAGGATGAGctaggtgtgtgtgggtgtgtgttgggtgtCGTAGATGTTCGTTCCTTCGCCAAGCGCTGCCAGACTTGCTGGATGCCCGCCATGAGAGATAAATACCCTCCACGCACCGGACATGCCAACTCACAGGAGGTGTTGCAGCAGATGGAGGAGGACCAAGGGGAATACCcagactctcttctctaccactttCCCTCCCAGCTCCGTCTGGATGCTTTGCCTGACCTGGTGGACATCAGTGTGACCCGCTGCCTGCTAACCGCACTCCTCACTGCCCTTAAAGCCAatggttCTCATGGTGTGTTctgtgagatgcagcctacagatCGCATGAGGCTGGACTTCCTGACTAAACTAGGCTTCCTGGAGATCATCAGAGGAGAGGCACGACACAGAGAGGGAGTGGTACTGGGCAGGCtgctctgaacacacacacacacacacacacacacacagaaatgtacACACAAGAGGTGTAATGGTTTACCAAACCCACGGTTCGTTATGCACATGATTACTCATCAAAAGTAAATTTAAAATAAAGTGCAATATGCGTGTGAAATCAATGTGTAAAAATGGCTCAGACATTGTATAGGTCTATGCTAATAATCTTTTTCTTACAAAGAGAAAAAGATGTTCACTTGTGTGACTCTCATAAAGAGAGCATGTCTGTAGCACAGTACTTCTCATCTCCCACTCCGAGGTAATGTGATGGGCTGTCACTGTTAAGTAGCTCTGTATACCTGGAGGTCCATTCATCTGTGGTAAGCATAACAGAGTGTGAATTGGCAAATTAATTTGTCGACCTCACCACCCGCCATTGTACAGAACTAGTTCCCGGCTGCGCCTCACAAAATGACAGTTTTTAAGTGCACCAATTAAGATCACAATTTTGATTACAAAGTGCGCATAGGCTGTCGTTGTTTTAAGGGAATAGccagaaattgttttttttttcagtaCAGAATTACTAGAGGCATACATCGCAGCATAGTCATagcatatatttaaaaaatgtattcattaaAGTTCACAGTACGACCCAAGGTCCCTGTACTGCCACCGTTACACCCCAATACACACCCATACATGCACGCGCTCACCCATTCAtttgcatgcatgcacgcacacacacacccagcacaTGCTCAAAAACACACATATACTCATATAAACACTGTGGAGTGCAAAAGAAACAATATAACTACTGTAAGCTTAATCACACACAGGTGATACAGGGTAATGGATTACACAGTGCTGTCTTTACACACACGAAAACACATGAAAAGACAGAGGGCAAACATTCacacgaacacacaaacacatatgcgAACACagatatgaacacacacaagGCTGAGGGTTATGTGGATGATGAAGACAGGCACAAAACCAatatgtgcatcagatggcacaCACGCAAACATACACACTGATAAATCTTACTCAGCGTAGGACATATAGCATCATTCATCACGTCCTTTTATTTCTATTTTCTAGAAGCACAAGAACAACAACGCATCCTTTAAACGTTTTATACCTGAGACATGTCTTCACTAGAAACCAAGAATGTCCTTTTCTATTGAGGAGACTTGGGCTGGGATTCAATCTGATCCTGCTTGTAGACAATGCAGCTTTTAAAGGCAATATCCCCACGTTTGCGGAGATCGCATTCAAGGGATTAGCACGGACCCTGGAACtgatcatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacat
>XM_021577637.2
ATAGTATCCTCCATTCCTCACACCTTGCATTTGCTTGCAGGAGGTGAGTGCGCCTGTGCGGGGGTTGAGCTAGCTGAGCAGGGAGAGCCAGCCGTGGCGGCACAGATGGAAAGGATGGAAATGGAGAACTACTCCGGCGCCTGACCTGAGACGGTACTTGGAAACGTTCGGTAGGCTAGGCTACTGCTCCGCTCGGTTGGATTGCCGGAGAGAGGCGAAGCGCACGGTGAAAGCAGGGGCGACACAGACAGAAAAGATGGACGGGAGAAGCGAGTTCCTTTGCGGGGTTGTGGAAGGGTTCTATGGGAGGCCCTGGTCTATGGAGCAGAGGAAGGTCCTTTTCCAGTGGATGCAGAGGTGGGAGTTGAACACCTATCTGTACGGTCCTAAAGATGATCTGAAACACAGACTACTCTGGAGAGAGGTCTACTCCCCTGAAGAGGAGGGTCAGTTGCATACTTTGATAGTAGAGTCAGAGAAGAGAGGTCTGAGGTttgtgtactctctctctcctggtcaaGACATTGTCTTCTCTTCTTCCTGCGACCTCTCCCTGCTTAAACGCAAGCTACGACAGgtgTCAAAGTTGGGTTGCCAGGCATTTGCGATCCTTTTTGATGACATAGACCACTCCCTGTGTCAGGCTGACAGTCAAGCCTTCTCCTCATTCGCTCACGCCCAGGTTTCAGTTGCCAATGAGATCTACCGATTCCTGGGAGAGCCGCCCGTCTTCCTGTTTTGTCCAACAGaGTACTGTGGCTCTCTATGTTCTCCCAGTGTATCTAAGTCTCCATATTTGATGACTGTTGGAGAGGACCTGCTGCCTAACATCTCTATCATATGGACCgGTAGTAAGGTAATCTCTAGAGAGCTGAGTGTAGAGGGTCTGTCTGAAGTACAGTCTGTCCTACAGCGCCCACCTCTGGTGTGGGACAACCTGCATGCAAATGACTACGACTCCAGACGTCTCTTCCTGGGTCCCTTCAAGGGTCGCTACCCCCAGCTTGCCACCCAACTCAGGGGCTTGCTACTTAACCCCAACTGTGAGTTCGAGGCCAACTACATACCCCTGCACACGCTGGGGACTTGGTACCGCactgggaggaaggagaagaaggATGAGGAGCACCAGTACTGTCCAGAGATGGCGCTGTCTACTGCACTGCACGACTGGATGGAAGAGCTCAGCCAACCACTGCagccagGTCGCCAGAGCAGACAGGCAGACCAGAGGTCATCGGGTCAAAAGTTGGGGACCCTAGAGAGTGAAAACTGTCTCCCCACCACCAGAGAAGGTCGCCCTAAACCCCCTAGAGAACCTCCGCAGGGGGACAGCCCTCCCCCCTCCAGCcctgagggagaggaaggggtgaggaggggggagaaagaaggaaggagtgagggaggagacggagaggagagagagaagaaactcCACAACAACCAGTTCCAACAAGGGCCAGGCCAGCCAAGGAGTCCAGGGGGGGTGCTGTGTGTTGAGAAGGCTCCTCTAAGCGAGTCCCAAATCCGTCTGCTGGTAGGTCTCCACTACCTTCCCCATGAGCACGGCCCATCAGCCCAGAGATTGTTACAAGACCTCACCTGGCTCAAAGAACACTGCCATCTGGTCAGCGCCAATGACAAGAAGGGACCGCCGCagaagGCGGAGGAGTGGCGTGGCCGAGCGGCTGGGTTCCTAGGTGTGTGTGAGGAGATTGCAGCGCTGCACAGTAGTGTAGTGAGTGGAGTGAGCAAGGCCGTGCTGTATGACCTTTACCCTTACGTATGGGACCTCAGAAACACTGCACTGGTGGCCAAGGCCTTCATCTGCTGGCTCGATGGGCGTGTGTTGAGTGACAGCTCTCCGTTGGGTTCCTGGAGGAACTGCTTCCACTGGTGCGGGACGACCACGGGGGCAGAGTTACTGGGGGTGGAGTCAGAACCCTGGGTGTTCAAAGGGGGAGTGTCCGGAGAGTTGCAGATGCTTCTACCTATAGGCAGTAACAGTGAACTGTTcagccaccctcctcctctcttccccacctcacGACTCTACAACATACGACCCTACCACAACAAGGACAAGGCGGAGCTGTATTGTATGGTGCGCCAGCTTCAACAGGGAGCCCAGGGGAGCCCTGATTCCAGCCCAGCACATCCTGACCTCATcggagacagGTGTCTGGGGCCCTGCCTGGCTTTGTGTCCTGAGTACAGCATGGTGCTGGAGGATGAGctaggtgtgtgtgggtgtgtgttgggtgtCGTAGATGTTCGTTCCTTCGCCAAGCGCTGCCAGACTTGCTGGATGCCCGCCATGAGAGATAAATACCCTCCACGCACCGGACATGCCAACTCACAGGAGGTGTTGCAGCAGATGGAGGAGGACCAAGGGGAATACCcagactctcttctctaccactttCCCTCCCAGCTCCGTCTGGATGCTTTGCCTGACCTGGTGGACATCAGTGTGACCCGCTGCCTGCTAACCGCACTCCTCACTGCCCTTAAAGCCAatggttCTCATGGTGTGTTctgtgagatgcagcctacagatCGCATGAGGCTGGACTTCCTGACTAAACTAGGCTTCCTGGAGATCATCAGAGGAGAGGCACGACACAGAGAGGGAGTGGTACTGGGCAGGCtgctctgaacacacacacacacacacacacacacacagaaatgtacACACAAGAGGTGTAATGGTTTACCAAACCCACGGTTCGTTATGCACATGATTACTCATCAAAAGTAAATTTAAAATAAAGTGCAATATGCGTGTGAAATCAATGTGTAAAAATGGCTCAGACATTGTATAGGTCTATGCTAATAATCTTTTTCTTACAAAGAGAAAAAGATGTTCACTTGTGTGACTCTCATAAAGAGAGCATGTCTGTAGCACAGTACTTCTCATCTCCCACTCCGAGGTAATGTGATGGGCTGTCACTGTTAAGTAGCTCTGTATACCTGGAGGTCCATTCATCTGTGGTAAGCATAACAGAGTGTGAATTGGCAAATTAATTTGTCGACCTCACCACCCGCCATTGTACAGAACTAGTTCCCGGCTGCGCCTCACAAAATGACAGTTTTTAAGTGCACCAATTAAGATCACAATTTTGATTACAAAGTGCGCATAGGCTGTCGTTGTTTTAAGGGAATAGccagaaattgttttttttttcagtaCAGAATTACTAGAGGCATACATCGCAGCATAGTCATagcatatatttaaaaaatgtattcattaaAGTTCACAGTACGACCCAAGGTCCCTGTACTGCCACCGTTACACCCCAATACACACCCATACATGCACGCGCTCACCCATTCAtttgcatgcatgcacgcacacacacacccagcacaTGCTCAAAAACACACATATACTCATATAAACACTGTGGAGTGCAAAAGAAACAATATAACTACTGTAAGCTTAATCACACACAGGTGATACAGGGTAATGGATTACACAGTGCTGTCTTTACACACACGAAAACACATGAAAAGACAGAGGGCAAACATTCacacgaacacacaaacacatatgcgAACACagatatgaacacacacaagGCTGAGGGTTATGTGGATGATGAAGACAGGCACAAAACCAatatgtgcatcagatggcacaCACGCAAACATACACACTGATAAATCTTACTCAGCGTAGGACATATAGCATCATTCATCACGTCCTTTTATTTCTATTTTCTAGAAGCACAAGAACAACAACGCATCCTTTAAACGTTTTATACCTGAGACATGTCTTCACTAGAAACCAAGAATGTCCTTTTCTATTGAGGAGACTTGGGCTGGGATTCAATCTGATCCTGCTTGTAGACAATGCAGCTTTTAAAGGCAATATCCCCACGTTTGCGGAGATCGCATTCAAGGGATTAGCACGGACCCTGGAACtgatcatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacat

Function

NR:

description
protein O-GlcNAcase-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577638.2 False 3941 mRNA 0.51 18 36523371 36588040
XM_021577637.2 True 4011 mRNA 0.51 18 36523376 36588040

Neighbor

gene id symbol gene type direction distance location
LOC110500329 LOC106609084 coding upstream 65574 36426140 ~ 36457797 (+)
LOC110500327 NA coding upstream 115862 36405999 ~ 36407509 (+)
LOC110500325 ppp2r5b coding upstream 285542 36189389 ~ 36237829 (+)
LOC118942923 NA coding upstream 399448 36120516 ~ 36123923 (+)
lgi2a LOC106609075 coding upstream 428907 36058116 ~ 36094464 (+)
LOC110500825 LOC106609032 coding downstream 78571 36666611 ~ 36756612 (+)
htr2cl1 LOC106609050 coding downstream 628165 37216205 ~ 37242879 (+)
zgc:109889 LOC100194703 coding downstream 660256 37248296 ~ 37314293 (+)
si:dkey-172j4.3 LOC106609052 coding downstream 842756 37430796 ~ 37537824 (+)
LOC110500311 LOC106609056 coding downstream 1061462 37649502 ~ 37656769 (+)
G1732722 NA non-coding upstream 537101 35985967 ~ 35986270 (+)
G1732467 NA non-coding upstream 639619 35866094 ~ 35883752 (+)
G1732338 rpl34 non-coding upstream 787401 35685557 ~ 35735970 (+)
G1732336 NA non-coding upstream 839199 35683917 ~ 35684172 (+)
G1732334 NA non-coding upstream 840275 35682873 ~ 35683096 (+)
G1733056 NA non-coding downstream 1523 36589563 ~ 36590879 (+)
G1733115 NA non-coding downstream 22254 36610294 ~ 36610497 (+)
G1733116 NA non-coding downstream 22576 36610616 ~ 36610846 (+)
G1733131 NA non-coding downstream 44724 36632764 ~ 36632984 (+)
G1733135 NA non-coding downstream 51433 36639473 ~ 36639697 (+)
G1732735 NA other upstream 480883 36041331 ~ 36042488 (+)
G1732028 NA other upstream 1039017 35439289 ~ 35484354 (+)
LOC110500285 fam19a5 other upstream 2654394 33709461 ~ 33869016 (+)
G1729465 NA other upstream 3201610 33321453 ~ 33321761 (+)
G1733187 NA other downstream 168949 36756989 ~ 36760221 (+)
G1734420 NA other downstream 782917 37370957 ~ 37371667 (+)
G1734479 NA other downstream 977388 37565428 ~ 37568953 (+)
cited1 LOC106609035 other downstream 1172295 37758759 ~ 37765562 (+)

Expression


Co-expression Network