Item | Value |
---|---|
gene id | zgc:109889 |
gene name | LOC100194703 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 37248296 ~ 37314293 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036957729.1 | False | 2508 | mRNA | 0.55 | 10 | 37248296 | 37311240 |
XM_036957725.1 | False | 2690 | mRNA | 0.54 | 12 | 37248297 | 37311240 |
XM_036957728.1 | False | 2569 | mRNA | 0.54 | 10 | 37248297 | 37311240 |
XM_036957724.1 | False | 2646 | mRNA | 0.54 | 11 | 37248298 | 37311240 |
XM_036957726.1 | False | 2590 | mRNA | 0.54 | 10 | 37248300 | 37311240 |
TU1986149 | False | 1047 | TUCP | 0.47 | 2 | 37248627 | 37252175 |
TU1986142 | False | 3774 | lncRNA | 0.41 | 3 | 37308773 | 37314293 |
TU1986143 | True | 3720 | lncRNA | 0.41 | 2 | 37308773 | 37314293 |
37,250,000
37,260,000
37,270,000
37,280,000
37,290,000
37,300,000
37,310,000
37,320,000
37,330,000
37,340,000
37,350,000
37,360,000
37,370,000
37,380,000
NC_048585.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
htr2cl1 | LOC106609050 | coding | upstream | 5423 | 37216205 ~ 37242879 (+) |
LOC110500825 | LOC106609032 | coding | upstream | 491684 | 36666611 ~ 36756612 (+) |
si:dkey-183c6.8 | LOC106609082 | coding | upstream | 660256 | 36523371 ~ 36588040 (+) |
LOC110500329 | LOC106609084 | coding | upstream | 790499 | 36426140 ~ 36457797 (+) |
LOC110500327 | NA | coding | upstream | 840787 | 36405999 ~ 36407509 (+) |
si:dkey-172j4.3 | LOC106609052 | coding | downstream | 119556 | 37430796 ~ 37537824 (+) |
LOC110500311 | LOC106609056 | coding | downstream | 338262 | 37649502 ~ 37656769 (+) |
LOC110500309 | LOC106604291 | coding | downstream | 390201 | 37701441 ~ 37703347 (+) |
hdac8 | hdac8 | coding | downstream | 409878 | 37721118 ~ 37757590 (+) |
cited1 | LOC106609035 | coding | downstream | 447519 | 37758759 ~ 37765562 (+) |
G1734232 | NA | non-coding | upstream | 47871 | 37200186 ~ 37200425 (+) |
G1734227 | NA | non-coding | upstream | 51351 | 37196613 ~ 37196945 (+) |
G1734205 | NA | non-coding | upstream | 65674 | 37182405 ~ 37182622 (+) |
G1734201 | NA | non-coding | upstream | 68179 | 37179901 ~ 37180117 (+) |
G1734411 | NA | non-coding | downstream | 46937 | 37358177 ~ 37358655 (+) |
G1734424 | NA | non-coding | downstream | 65389 | 37376629 ~ 37376859 (+) |
G1734425 | NA | non-coding | downstream | 65717 | 37376957 ~ 37377281 (+) |
G1734427 | NA | non-coding | downstream | 81265 | 37392505 ~ 37392720 (+) |
G1734435 | NA | non-coding | downstream | 95329 | 37406569 ~ 37406822 (+) |
G1733187 | NA | other | upstream | 489413 | 36756989 ~ 36760221 (+) |
LOC110500325 | ppp2r5b | other | upstream | 1012031 | 36189389 ~ 36237829 (+) |
G1732735 | NA | other | upstream | 1205808 | 36041331 ~ 36042488 (+) |
G1732028 | NA | other | upstream | 1763942 | 35439289 ~ 35484354 (+) |
LOC110500285 | fam19a5 | other | upstream | 3379319 | 33709461 ~ 33869016 (+) |
G1734420 | NA | other | downstream | 59717 | 37370957 ~ 37371667 (+) |
G1734479 | NA | other | downstream | 254188 | 37565428 ~ 37568953 (+) |
G1734960 | NA | other | downstream | 731851 | 38043091 ~ 38045066 (+) |
G1734961 | NA | other | downstream | 733868 | 38045108 ~ 38046506 (+) |
zgc:109889 | LOC100194703 | other | upstream | 56598 | 37248296 ~ 37314293 (+) |