LOC118943010


Basic Information

Item Value
gene id LOC118943010
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 37771313 ~ 37771447 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038747.1
CCTCCATTTCTTGACACTCATGTAGTTGCTCAGTACTCATGTGTGATTGTACGGAGGTAGAACAAAGCCAATGCTATGTCTTCGGTACCAGCGTGTTATTGTCTGCTGGTTCTATCCTCAATCGCTGGCACACTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038747.1 True 135 mRNA 0.46 1 37771313 37771447

Neighbor

gene id symbol gene type direction distance location
LOC118943014 NA coding upstream 1390 37769848 ~ 37769923 (+)
LOC118943013 NA coding upstream 3096 37768142 ~ 37768217 (+)
cited1 LOC106609035 coding upstream 5751 37758759 ~ 37765562 (+)
hdac8 hdac8 coding upstream 13723 37721118 ~ 37757590 (+)
LOC110500309 LOC106604291 coding upstream 67966 37701441 ~ 37703347 (+)
nhsl2 nhsl2 coding downstream 29611 37801058 ~ 37953220 (+)
arhgap36 LOC106609060 coding downstream 186570 37958017 ~ 38050782 (+)
LOC110500301 LOC106609063 coding downstream 305536 38076983 ~ 38083972 (+)
LOC110500338 LOC106609064 coding downstream 361612 38133059 ~ 38166964 (+)
col4a6 LOC106608923 coding downstream 523983 38295430 ~ 38482345 (+)
G1734762 NA non-coding upstream 54100 37716897 ~ 37717213 (+)
G1734745 NA non-coding upstream 71376 37699418 ~ 37699937 (+)
G1734743 NA non-coding upstream 74322 37696759 ~ 37696991 (+)
G1734588 NA non-coding upstream 80182 37690913 ~ 37691131 (+)
G1734802 NA non-coding downstream 17958 37789405 ~ 37789781 (+)
G1734864 NA non-coding downstream 117077 37888524 ~ 37888725 (+)
G1734877 NA non-coding downstream 133175 37904622 ~ 37905024 (+)
G1734878 NA non-coding downstream 135130 37906577 ~ 37906780 (+)
G1734921 NA non-coding downstream 205653 37977100 ~ 37977958 (+)
G1734479 NA other upstream 202360 37565428 ~ 37568953 (+)
G1734420 NA other upstream 399646 37370957 ~ 37371667 (+)
zgc:109889 LOC100194703 other upstream 519138 37248296 ~ 37314293 (+)
G1733187 NA other upstream 1012430 36756989 ~ 36760221 (+)
G1734960 NA other downstream 271644 38043091 ~ 38045066 (+)
G1734961 NA other downstream 273661 38045108 ~ 38046506 (+)
arrb2b LOC106608931 other downstream 1096520 38867935 ~ 38939119 (+)
nat16 LOC106608942 other downstream 1407840 39179147 ~ 39211035 (+)

Expression


Co-expression Network