arhgap36 (LOC106609060)


Basic Information

Item Value
gene id arhgap36
gene name LOC106609060
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 37958017 ~ 38050782 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036957753.1
gtgggtgggggggACCACACAACAACAACCTCATACTGGGCTCAAGCTGTCTCTTGACTGATGGACAACTCTACACATCAACAGTTACTGTCTAagcagtgagaggaggagaggataggaaagAGAGGAGCGCTAAAGAGAAGAGAGTCAAGGAGGCTCACCTCGGTCCCCTCTCTGAGGAGAAGAAAAACAATTTTTTAGTCACTGATGGAATATCTTCTTCAGTGATGCAGATGGAGCAGCCTGTGCGGCAGGAcatgcagttctactacgtggggGACCATACGTGGGCGACCATGCTGGGCCAGAGTGTGCGTCTGCAGCCGGTGCCTATCCAGAGCCTATCTGAACTGGAGAGAGCTAGGCTGCAAGAGGTAGCCTGCTACCATCTCGGGGAGCGGGACCTTGACTTCAACATCAGCATCCCCAGAGAAATCCGTAAGAGGAGAAAATCGCTCAGAAGGAAGTTTGACTCCTTCTCCaaagaaaagaaagagaaagagcgagAGACAGCCGCCAAGGCGTTTGGCATACCTCTTTCGCAGGCGATAGCCAACGACCGGGCATACAAGCAGCGTCAGGATGCTCTGAagGAGAGCCGGAGAGACTGCCTTGATCTAGAGGCCAGCGTCCTGAGGTTCCGGGCTGAGAAACAACAGCAGAGCAACGGGAATAAACCCCTCTGTAGCACGGCTTCATCCCCCTTCAGTGGTGCTACATCCTCCTCATCATCGGCAGCACTGGCGTTGCACAGCAAGCCACTCTCACCCAGGTTCCTGGATAAGAAAGCTAGAGTGCAGAGACGGGGTGGCCTGTCAGTGGACTCCATCTCAGATCTTGTAGAGAGTCAGTCCCGCCTGTTGGAGGCGCTGCAGCTGTCCCACCCTGCAGAGCTGGAGCTGAAGAAGACTGCAGCAGGTGCCGGGGGGCGGACTCAGACCAAGTTGAGCCTCAACCCCATCTATAGACAGGTTCCCCGTGTGTTGGAGAGGTGCTGCTGTCACATAGAGAGACACGgTCTACAAACTGTGGGGATCTTTCGTGTTGGGAGTTCCAAAAAGAGAGTTCGGCAGCTGCGTGAGGACTTTGACATAGGGACAGACGTGTGTTTGGATGAAGAGCACAGTGTCCACGATGTAGCGGCATTACTGAAGGAGTTCCTCAGAGACATGCCTGACCCTCTACTGCCAAGAGAGCTCTACGCTGCCTTCCTACACGCCAACCttctgcGAGGGACAGACCAGCTAATGTACCTCCAGCAGCTGCTCTACCTGTTACCCCCCTGTAACTGTGATACCCTGCTCCGCCTCCTCACCCTGTTACACACCGTACAAAGCCACGCACAGgacaccacaggaccacagcacCAGGAGTTCCCCGGCAACAAGATGACAGCAACCAACCTGGCAGTGATCTTTGGTCCCAACCTGCTGCAGGGGGAGAGGGGCGGAGGGGACAGGGAGATGAGTCCCCACGCCATGGGCATTGAGGACAGCGCTGCCATCATCAACGTCACCCTTCACCTTATACAGAACTACAGGCGACTGTTCACGgtgTCAGCAGAGCTCCAGCAGGAGGTATTGATGAGTCTCATCCAGACAGATCCTGACATCATCGACTATCTCCTCCGCAGGAAACTCAGTGGCAGTCACCTGACGGTGGAGACGGTAGACACAGCGGGGGGTCGGCGGGACACGGGGGCATCTCTGGACTCGGTAGGGGCGTCTAGTGGAAGCCTGTCACCCCTGGAGCCATCGCCCCTCTTCAACCCCGACGAGCCAGGGGACAGCAGGCTGACCACAGAGGTGTTCCTCAACCTCAACGTCCTCCAACGCCACCATAACAACAAGAAACGTTCCAACGAGACCCCGTCCAAGTCCATTGGTCAGATGAGACAGTTCCACTCCCACCACAACCTACTGAGTCTGGCCCAGCCCTCCAGTAGCTCCAGAGTCCACCCAGAGGACAGCCAACACCATGCCCAGGAACGGAGGATTCCGCTGGGCGAAGGTCTGAGCTTCACCCTGGGGGCTGCCTCATGCTCCAGCCTGGGAGGACAGGGGGAAAACAGTATCTGGGTGAGGCAGACACcccaggaggagaaagagaaaccCTCTCCTAGTCATACAAGTCATTTTTGGGACTTCTTCACAGGCAAGGGCTCAGGGTCTGAGACCATGGTATGACAGGATAgaacactggggggggggggggtggattggGACTAGAAATGGTTGGATTGGCCCACCATGCCTTTGTCTGGTCTGCCATATTGTCATTTCTGGGTGGCTGGGAGGTGGTTGGACCACGTTGAGGGACACTGATGTAGAGTAGTGTTTATACGTATTCATACGAGTGCAAACGTAGACCGCACACACATTGTTGTAACGTGTGAACTTATATTTTTTACTCTAGCGCCTATCCCCTTCCCCTCTATCCCTCAACTTATCCATGATCTCTCGTGATGCTACACTGAGCTCCATCCAAACAGCCAGAAAAAAAACATCAGTGGCTGTATCCTTTATGATCATCTATATTATGAACCCTCTGTTGGGTAACTGAACACTTAATGTTTGATACGGCTGAAGACCAAGGAGACGATGGGCAACACACTGTAAATACATAGTGTTTTAAACCGTGAAGACTATGGGCTCGATTCATATAAAGTTCTGCGTTGGAGCCTGATTGACATTTTAAAGACAACGTTCCCATGCTAGCCGAGACTGCATTCACCGTTAaccgctgcatatgtcggctcaatcgggaAATTAATTCAATCCCAAGTGCTTTCTCGAATCTCATATATTGGGTTTGAAACATTGGTTGCCATGACAAAGGTGACATTTTTCATATGTACAGAAAAGTATATTCAATGCGTTTGCTTCATCTTCTGGTGAAAGGTCACCCCACACATCATTTCTGTCTGGAACTTATCACGCTTCACAGGACTATAGTAATTAACTACCGGGGACAATGTGGCCATGTATTCAATAACTAAAGAACTACCTGAGAATTCAATTGGGCTTGAGGATTGAGACAACTTCTTATAGTAAACCTGTCCCTACCATGTAAATGCAGTATTGTCTGTTTTTTGTATGTATATAAAAAATGTAGGCTTGTGTGCATCCAGTCTCTGTATTTGTTCTGGACCTTGTTGAATTGCAGTATTGATATCCAACAAAATACTTGTTCCATGAGGTGCTTGCTATCCTGTAAATATTAATCTCACTCTTgtaccattagacagtatgtgcAAATTTTTTTGGGGCAATACTTTTCTATACTTTGTAAACAAGCAAGCAATATCCCCTCAAGGTGTAGCTAGATTTCAAACTGTCTATTTTCTTACAGGTGTTTCTTGTATCTTGGAATGCATCTATGTACGAGATTTGAATTAAATGTACAATTGTT
>XM_036957755.1
gtgggtgggggggACCACACAACAACAACCTCATACTGGGCTCAAGCTGTCTCTTGACTGATGGACAACTCTACACATCAACAGTTACTGTCTAagcagtgagaggaggagaggataggaaagAGAGGAGCGCTAAAGAGAAGAGAGTCAAGGAGGCTCACCTCGGTCCCCTCTCTGAGGAGAAGAAAAACAATTTTTTAGTCACTGATGGAATATCTTCTTCAGTGATGCAGATGGAGCAGCCTGTGCGGCAGGAcatgcagttctactacgtggggGACCATACGTGGGCGACCATGCTGGGCCAGAGTGTGCGTCTGCAGCCGGTGCCTATCCAGAGCCTATCTGAACTGGAGAGAGCTAGGCTGCAAGAGGTAGCCTGCTACCATCTCGGGGAGCGGGACCTTGACTTCAACATCAGCATCCCCAGAGAGACAGCCGCCAAGGCGTTTGGCATACCTCTTTCGCAGGCGATAGCCAACGACCGGGCATACAAGCAGCGTCAGGATGCTCTGAagGAGAGCCGGAGAGACTGCCTTGATCTAGAGGCCAGCGTCCTGAGGTTCCGGGCTGAGAAACAACAGCAGAGCAACGGGAATAAACCCCTCTGTAGCACGGCTTCATCCCCCTTCAGTGGTGCTACATCCTCCTCATCATCGGCAGCACTGGCGTTGCACAGCAAGCCACTCTCACCCAGGTTCCTGGATAAGAAAGCTAGAGTGCAGAGACGGGGTGGCCTGTCAGTGGACTCCATCTCAGATCTTGTAGAGAGTCAGTCCCGCCTGTTGGAGGCGCTGCAGCTGTCCCACCCTGCAGAGCTGGAGCTGAAGAAGACTGCAGCAGGTGCCGGGGGGCGGACTCAGACCAAGTTGAGCCTCAACCCCATCTATAGACAGGTTCCCCGTGTGTTGGAGAGGTGCTGCTGTCACATAGAGAGACACGgTCTACAAACTGTGGGGATCTTTCGTGTTGGGAGTTCCAAAAAGAGAGTTCGGCAGCTGCGTGAGGACTTTGACATAGGGACAGACGTGTGTTTGGATGAAGAGCACAGTGTCCACGATGTAGCGGCATTACTGAAGGAGTTCCTCAGAGACATGCCTGACCCTCTACTGCCAAGAGAGCTCTACGCTGCCTTCCTACACGCCAACCttctgcGAGGGACAGACCAGCTAATGTACCTCCAGCAGCTGCTCTACCTGTTACCCCCCTGTAACTGTGATACCCTGCTCCGCCTCCTCACCCTGTTACACACCGTACAAAGCCACGCACAGgacaccacaggaccacagcacCAGGAGTTCCCCGGCAACAAGATGACAGCAACCAACCTGGCAGTGATCTTTGGTCCCAACCTGCTGCAGGGGGAGAGGGGCGGAGGGGACAGGGAGATGAGTCCCCACGCCATGGGCATTGAGGACAGCGCTGCCATCATCAACGTCACCCTTCACCTTATACAGAACTACAGGCGACTGTTCACGgtgTCAGCAGAGCTCCAGCAGGAGGTATTGATGAGTCTCATCCAGACAGATCCTGACATCATCGACTATCTCCTCCGCAGGAAACTCAGTGGCAGTCACCTGACGGTGGAGACGGTAGACACAGCGGGGGGTCGGCGGGACACGGGGGCATCTCTGGACTCGGTAGGGGCGTCTAGTGGAAGCCTGTCACCCCTGGAGCCATCGCCCCTCTTCAACCCCGACGAGCCAGGGGACAGCAGGCTGACCACAGAGGTGTTCCTCAACCTCAACGTCCTCCAACGCCACCATAACAACAAGAAACGTTCCAACGAGACCCCGTCCAAGTCCATTGGTCAGATGAGACAGTTCCACTCCCACCACAACCTACTGAGTCTGGCCCAGCCCTCCAGTAGCTCCAGAGTCCACCCAGAGGACAGCCAACACCATGCCCAGGAACGGAGGATTCCGCTGGGCGAAGGTCTGAGCTTCACCCTGGGGGCTGCCTCATGCTCCAGCCTGGGAGGACAGGGGGAAAACAGTATCTGGGTGAGGCAGACACcccaggaggagaaagagaaaccCTCTCCTAGTCATACAAGTCATTTTTGGGACTTCTTCACAGGCAAGGGCTCAGGGTCTGAGACCATGGTATGACAGGATAgaacactggggggggggggggtggattggGACTAGAAATGGTTGGATTGGCCCACCATGCCTTTGTCTGGTCTGCCATATTGTCATTTCTGGGTGGCTGGGAGGTGGTTGGACCACGTTGAGGGACACTGATGTAGAGTAGTGTTTATACGTATTCATACGAGTGCAAACGTAGACCGCACACACATTGTTGTAACGTGTGAACTTATATTTTTTACTCTAGCGCCTATCCCCTTCCCCTCTATCCCTCAACTTATCCATGATCTCTCGTGATGCTACACTGAGCTCCATCCAAACAGCCAGAAAAAAAACATCAGTGGCTGTATCCTTTATGATCATCTATATTATGAACCCTCTGTTGGGTAACTGAACACTTAATGTTTGATACGGCTGAAGACCAAGGAGACGATGGGCAACACACTGTAAATACATAGTGTTTTAAACCGTGAAGACTATGGGCTCGATTCATATAAAGTTCTGCGTTGGAGCCTGATTGACATTTTAAAGACAACGTTCCCATGCTAGCCGAGACTGCATTCACCGTTAaccgctgcatatgtcggctcaatcgggaAATTAATTCAATCCCAAGTGCTTTCTCGAATCTCATATATTGGGTTTGAAACATTGGTTGCCATGACAAAGGTGACATTTTTCATATGTACAGAAAAGTATATTCAATGCGTTTGCTTCATCTTCTGGTGAAAGGTCACCCCACACATCATTTCTGTCTGGAACTTATCACGCTTCACAGGACTATAGTAATTAACTACCGGGGACAATGTGGCCATGTATTCAATAACTAAAGAACTACCTGAGAATTCAATTGGGCTTGAGGATTGAGACAACTTCTTATAGTAAACCTGTCCCTACCATGTAAATGCAGTATTGTCTGTTTTTTGTATGTATATAAAAAATGTAGGCTTGTGTGCATCCAGTCTCTGTATTTGTTCTGGACCTTGTTGAATTGCAGTATTGATATCCAACAAAATACTTGTTCCATGAGGTGCTTGCTATCCTGTAAATATTAATCTCACTCTTgtaccattagacagtatgtgcAAATTTTTTTGGGGCAATACTTTTCTATACTTTGTAAACAAGCAAGCAATATCCCCTCAAGGTGTAGCTAGATTTCAAACTGTCTATTTTCTTACAGGTGTTTCTTGTATCTTGGAATGCATCTATGTACGAGATTTGAATTAAATGTACAATTGTT
>XM_036957754.1
TGGCAGCGAGACTCAGCTCACTGATTTACACCAGCAGATGGAGGgagcagatctctctctctctctccttctgttgctCGCTCTGTCTTGCTCTCCTTACACCGAGTGTGTTCCCTCATGCCCCATTTGGACTGGGCACACTAACCTGGTCTGCGTCTCTGCTGTGAGTGTGCGAGTTTGAGTGTGAGCGTGAGAAGTAGCTGTGCAGACTACAGGACTTAGCTGAGTGGACTCACTCACTCCATAAAGGGCTTTATTCATCTACAGCTGACTATCTACGTACAGgggGACCATACGTGGGCGACCATGCTGGGCCAGAGTGTGCGTCTGCAGCCGGTGCCTATCCAGAGCCTATCTGAACTGGAGAGAGCTAGGCTGCAAGAGGTAGCCTGCTACCATCTCGGGGAGCGGGACCTTGACTTCAACATCAGCATCCCCAGAGAAATCCGTAAGAGGAGAAAATCGCTCAGAAGGAAGTTTGACTCCTTCTCCaaagaaaagaaagagaaagagcgagAGACAGCCGCCAAGGCGTTTGGCATACCTCTTTCGCAGGCGATAGCCAACGACCGGGCATACAAGCAGCGTCAGGATGCTCTGAagGAGAGCCGGAGAGACTGCCTTGATCTAGAGGCCAGCGTCCTGAGGTTCCGGGCTGAGAAACAACAGCAGAGCAACGGGAATAAACCCCTCTGTAGCACGGCTTCATCCCCCTTCAGTGGTGCTACATCCTCCTCATCATCGGCAGCACTGGCGTTGCACAGCAAGCCACTCTCACCCAGGTTCCTGGATAAGAAAGCTAGAGTGCAGAGACGGGGTGGCCTGTCAGTGGACTCCATCTCAGATCTTGTAGAGAGTCAGTCCCGCCTGTTGGAGGCGCTGCAGCTGTCCCACCCTGCAGAGCTGGAGCTGAAGAAGACTGCAGCAGGTGCCGGGGGGCGGACTCAGACCAAGTTGAGCCTCAACCCCATCTATAGACAGGTTCCCCGTGTGTTGGAGAGGTGCTGCTGTCACATAGAGAGACACGgTCTACAAACTGTGGGGATCTTTCGTGTTGGGAGTTCCAAAAAGAGAGTTCGGCAGCTGCGTGAGGACTTTGACATAGGGACAGACGTGTGTTTGGATGAAGAGCACAGTGTCCACGATGTAGCGGCATTACTGAAGGAGTTCCTCAGAGACATGCCTGACCCTCTACTGCCAAGAGAGCTCTACGCTGCCTTCCTACACGCCAACCttctgcGAGGGACAGACCAGCTAATGTACCTCCAGCAGCTGCTCTACCTGTTACCCCCCTGTAACTGTGATACCCTGCTCCGCCTCCTCACCCTGTTACACACCGTACAAAGCCACGCACAGgacaccacaggaccacagcacCAGGAGTTCCCCGGCAACAAGATGACAGCAACCAACCTGGCAGTGATCTTTGGTCCCAACCTGCTGCAGGGGGAGAGGGGCGGAGGGGACAGGGAGATGAGTCCCCACGCCATGGGCATTGAGGACAGCGCTGCCATCATCAACGTCACCCTTCACCTTATACAGAACTACAGGCGACTGTTCACGgtgTCAGCAGAGCTCCAGCAGGAGGTATTGATGAGTCTCATCCAGACAGATCCTGACATCATCGACTATCTCCTCCGCAGGAAACTCAGTGGCAGTCACCTGACGGTGGAGACGGTAGACACAGCGGGGGGTCGGCGGGACACGGGGGCATCTCTGGACTCGGTAGGGGCGTCTAGTGGAAGCCTGTCACCCCTGGAGCCATCGCCCCTCTTCAACCCCGACGAGCCAGGGGACAGCAGGCTGACCACAGAGGTGTTCCTCAACCTCAACGTCCTCCAACGCCACCATAACAACAAGAAACGTTCCAACGAGACCCCGTCCAAGTCCATTGGTCAGATGAGACAGTTCCACTCCCACCACAACCTACTGAGTCTGGCCCAGCCCTCCAGTAGCTCCAGAGTCCACCCAGAGGACAGCCAACACCATGCCCAGGAACGGAGGATTCCGCTGGGCGAAGGTCTGAGCTTCACCCTGGGGGCTGCCTCATGCTCCAGCCTGGGAGGACAGGGGGAAAACAGTATCTGGGTGAGGCAGACACcccaggaggagaaagagaaaccCTCTCCTAGTCATACAAGTCATTTTTGGGACTTCTTCACAGGCAAGGGCTCAGGGTCTGAGACCATGGTATGACAGGATAgaacactggggggggggggggtggattggGACTAGAAATGGTTGGATTGGCCCACCATGCCTTTGTCTGGTCTGCCATATTGTCATTTCTGGGTGGCTGGGAGGTGGTTGGACCACGTTGAGGGACACTGATGTAGAGTAGTGTTTATACGTATTCATACGAGTGCAAACGTAGACCGCACACACATTGTTGTAACGTGTGAACTTATATTTTTTACTCTAGCGCCTATCCCCTTCCCCTCTATCCCTCAACTTATCCATGATCTCTCGTGATGCTACACTGAGCTCCATCCAAACAGCCAGAAAAAAAACATCAGTGGCTGTATCCTTTATGATCATCTATATTATGAACCCTCTGTTGGGTAACTGAACACTTAATGTTTGATACGGCTGAAGACCAAGGAGACGATGGGCAACACACTGTAAATACATAGTGTTTTAAACCGTGAAGACTATGGGCTCGATTCATATAAAGTTCTGCGTTGGAGCCTGATTGACATTTTAAAGACAACGTTCCCATGCTAGCCGAGACTGCATTCACCGTTAaccgctgcatatgtcggctcaatcgggaAATTAATTCAATCCCAAGTGCTTTCTCGAATCTCATATATTGGGTTTGAAACATTGGTTGCCATGACAAAGGTGACATTTTTCATATGTACAGAAAAGTATATTCAATGCGTTTGCTTCATCTTCTGGTGAAAGGTCACCCCACACATCATTTCTGTCTGGAACTTATCACGCTTCACAGGACTATAGTAATTAACTACCGGGGACAATGTGGCCATGTATTCAATAACTAAAGAACTACCTGAGAATTCAATTGGGCTTGAGGATTGAGACAACTTCTTATAGTAAACCTGTCCCTACCATGTAAATGCAGTATTGTCTGTTTTTTGTATGTATATAAAAAATGTAGGCTTGTGTGCATCCAGTCTCTGTATTTGTTCTGGACCTTGTTGAATTGCAGTATTGATATCCAACAAAATACTTGTTCCATGAGGTGCTTGCTATCCTGTAAATATTAATCTCACTCTTgtaccattagacagtatgtgcAAATTTTTTTGGGGCAATACTTTTCTATACTTTGTAAACAAGCAAGCAATATCCCCTCAAGGTGTAGCTAGATTTCAAACTGTCTATTTTCTTACAGGTGTTTCTTGTATCTTGGAATGCATCTATGTACGAGATTTGAATTAAATGTACAATTGTT

Function

NR:

description
PREDICTED: rho GTPase-activating protein 6-like isoform X1

GO: NA

KEGG:

id description
K19845 SAC7; GTPase-activating protein SAC7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036957753.1 False 3411 mRNA 0.51 13 37958017 38050782
XM_036957755.1 False 3336 mRNA 0.51 12 37958017 38050782
XM_036957754.1 True 3421 mRNA 0.51 13 37993101 38050782

Neighbor

gene id symbol gene type direction distance location
nhsl2 nhsl2 coding upstream 4797 37801058 ~ 37953220 (+)
rs4x rs4x coding upstream 185063 37766654 ~ 37772954 (+)
LOC118943010 NA coding upstream 186570 37771313 ~ 37771447 (+)
LOC118943014 NA coding upstream 188094 37769848 ~ 37769923 (+)
LOC118943013 NA coding upstream 189800 37768142 ~ 37768217 (+)
LOC110500301 LOC106609063 coding downstream 26201 38076983 ~ 38083972 (+)
LOC110500338 LOC106609064 coding downstream 82277 38133059 ~ 38166964 (+)
col4a6 LOC106608923 coding downstream 244648 38295430 ~ 38482345 (+)
ankrd46b ankrd46 coding downstream 432621 38483403 ~ 38496665 (+)
LOC118942926 NA coding downstream 455322 38506104 ~ 38514584 (+)
G1734878 NA non-coding upstream 51237 37906577 ~ 37906780 (+)
G1734877 NA non-coding upstream 52993 37904622 ~ 37905024 (+)
G1734864 NA non-coding upstream 69292 37888524 ~ 37888725 (+)
G1734802 NA non-coding upstream 168236 37789405 ~ 37789781 (+)
cited1 LOC106609035 non-coding upstream 192482 37758759 ~ 37765562 (+)
G1734853 NA non-coding downstream 301 38051083 ~ 38056244 (+)
G1734980 NA non-coding downstream 24972 38075754 ~ 38076214 (+)
G1734981 NA non-coding downstream 25681 38076463 ~ 38076967 (+)
G1734959 NA non-coding downstream 36649 38087431 ~ 38088046 (+)
G1734988 NA non-coding downstream 39552 38090334 ~ 38090968 (+)
G1734479 NA other upstream 389064 37565428 ~ 37568953 (+)
G1734420 NA other upstream 586350 37370957 ~ 37371667 (+)
zgc:109889 LOC100194703 other upstream 705842 37248296 ~ 37314293 (+)
G1733187 NA other upstream 1199134 36756989 ~ 36760221 (+)
arrb2b LOC106608931 other downstream 817185 38867935 ~ 38939119 (+)
nat16 LOC106608942 other downstream 1128505 39179147 ~ 39211035 (+)
G1736098 NA other downstream 1182882 39233664 ~ 39289670 (+)
G1736484 LOC106608963 other downstream 1824974 39875756 ~ 39876950 (+)

Expression


Co-expression Network