ankrd46b (ankrd46)


Basic Information

Item Value
gene id ankrd46b
gene name ankrd46
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 38483403 ~ 38496665 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577655.2
AGTAAACGATTTatattgcaaaacgttttgcaacagaatcggcgtaATGATTACACCCAGAGAGTAACCCAGTTTGCGCTGAGCTGTTGTAAAATCACAGCTGGTTCAGcatccaccacaacaacacactgcTTAGCAGAAAAGCGAATTTAGATTTTCTCCTCTGATTTGGAACACCTAAACAGgTACGCTGGAATTTTCTGACACCCACTCGGACATGTCCTATGTCTTCATTAACGACTCGTCGCAGACCTCCGTTCCCCTGCTGCAGGCCTGCATTGACGGGGACCTGCCTTTCGCCAAGCGGCTACTGGAGACTGGCTGTGACCCAAACATACGGGACAACCGGGGTCGTACGGGCCTGCACCTAGCTGCTGCCAGGGGGAACGTGGACATCTGTTGGTTCCTCCATAAGTTTGGGGCAGACCTCCTGGCTACAGACTACCAGGGAAACACAGCCCTGCACCTCTGTGGACATGTGGATACCATCCAGTTCCTGGTGTCCAACGGCCTCAAGATAGACATCTGTAACCACAACGGGTCGACTCCCCTTGTACTGGCCAAGAGGCGCGGGGTGAACAAGGACGCTATCCGTCTGCTGGAGGGCCTGGAGGAGCAGGAAGTTAAAGGATTCAACAGAGGAGCCCACTCCAAACTGGAGACCATGCAGATGGCTGAGAGcgagagTGCAATGGAGAGCCACTCCCTGCTCAACCCCAACCTCCAGAACAGTGAGGGGGTACTGTCGAGTTTCAGGACCACCTGGCAGGAGTTTGTAGAGGACCTGGGCTTCTGGAGGGTGCTGCTACTACTGGTGGTTATCGCCCTGCTCTCCCTGGGCATCGCTTACTACGTCAGCGGGGTGCTGCCCTTCTCCGCCAGCCAACTGGAGCTGGTAcactgaggagggagagaggaacggTCGGAACTGGGGCACAGATAGAGGAAGGAGGGGGTTATAAAAAAAGAGGACAAGAATGGAAGGTTTGGGGCGACATGCAAGGAAGCACTGGGGTTTAGATTGTAAAGGGGTGGGTGGATGTTTTAACTTTTAGATTCACTCGCGCACACATACGCACTCGCATAATTCCAGCAAAACATTCCCTTTCCAACCTTGGAGACTACTCTTACCTTAACAATCCAGCCCATTCTAGCAGAGGGCAGAGTAATGCTTGTTCTCATGTGATGTCATTGTGATTGACATGACTAGCCAGGGCTTGTTGTCCATATGTGATGGTTAACAGTGGCTTTTCCCCAGCTGGGCCACGTCCCAATGATCTCTCATTCCTCCTAAAGTGTGCACATGTTAACTTCCCTTCACTAATTTGAAAGCATATGACTGGTATATGAAATATGGCAAGAACTCCCAGCCaggcctccaccaatccaatgcttttaaattTGTTATAAGGCGTGAAttagtgtacacttcaggagaaaggagatatTATTGGGCAGCACCCCGGAAGTCTGCATTTCCTGCATTTTGTACTATATATGTGTTCTATAACATTTGCTTTAAACATTCTCAATGTGGCCCGTTATGAATGAGAATCCACATCATTTCATGTGTTAGTAATCCCTATGACAAAATAAATGACTAAATCAAACTAAA

Function

symbol description
ankrd46 Predicted to be integral component of membrane.

NR:

description
Ankyrin repeat domain-containing protein 46

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577655.2 True 1615 mRNA 0.49 6 38483403 38496665

Neighbor

gene id symbol gene type direction distance location
col4a6 LOC106608923 coding upstream 1058 38295430 ~ 38482345 (+)
LOC110500338 LOC106609064 coding upstream 316439 38133059 ~ 38166964 (+)
LOC110500301 LOC106609063 coding upstream 399431 38076983 ~ 38083972 (+)
arhgap36 LOC106609060 coding upstream 432621 37958017 ~ 38050782 (+)
nhsl2 nhsl2 coding upstream 530183 37801058 ~ 37953220 (+)
LOC118942926 NA coding downstream 9439 38506104 ~ 38514584 (+)
LOC110515117 LOC106608926 coding downstream 45714 38542379 ~ 38654406 (+)
LOC110500343 mtm1 coding downstream 165419 38662084 ~ 38720802 (+)
LOC110500344 LOC106608928 coding downstream 229767 38726432 ~ 38739708 (+)
hmgb3a LOC106608930 coding downstream 360451 38857116 ~ 38864530 (+)
G1735560 NA non-coding upstream 36887 38443620 ~ 38446516 (+)
G1735507 NA non-coding upstream 138253 38344950 ~ 38345150 (+)
G1735466 NA non-coding upstream 173186 38310006 ~ 38310217 (+)
G1735483 NA non-coding upstream 174115 38308982 ~ 38309288 (+)
G1735479 NA non-coding upstream 177271 38305873 ~ 38306132 (+)
G1735700 NA non-coding downstream 2144 38498809 ~ 38499101 (+)
G1735701 NA non-coding downstream 2709 38499374 ~ 38499584 (+)
G1735723 NA non-coding downstream 18567 38515232 ~ 38516261 (+)
G1735756 NA non-coding downstream 49531 38546196 ~ 38546703 (+)
G1735770 NA non-coding downstream 78293 38574958 ~ 38576555 (+)
G1734961 NA other upstream 436897 38045108 ~ 38046506 (+)
G1734960 NA other upstream 438337 38043091 ~ 38045066 (+)
cited1 LOC106609035 other upstream 720145 37758759 ~ 37765562 (+)
G1734479 NA other upstream 914450 37565428 ~ 37568953 (+)
arrb2b LOC106608931 other downstream 371302 38867935 ~ 38939119 (+)
nat16 LOC106608942 other downstream 682622 39179147 ~ 39211035 (+)
G1736098 NA other downstream 736999 39233664 ~ 39289670 (+)
G1736484 LOC106608963 other downstream 1379091 39875756 ~ 39876950 (+)
G1737353 NA other downstream 1566041 40062706 ~ 40063325 (+)

Expression


Co-expression Network