Item | Value |
---|---|
gene id | zgc:92664 |
gene name | LOC106608937 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 39003738 ~ 39022864 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021577681.2 | False | 1400 | mRNA | 0.45 | 6 | 39003738 | 39010433 |
XM_021577680.2 | False | 1408 | mRNA | 0.45 | 6 | 39003738 | 39010438 |
XM_021577678.2 | False | 2180 | mRNA | 0.42 | 6 | 39003738 | 39022864 |
XM_021577679.2 | False | 2177 | mRNA | 0.42 | 6 | 39003738 | 39022864 |
XM_021577682.2 | False | 2075 | mRNA | 0.41 | 5 | 39003738 | 39022864 |
XM_036957784.1 | False | 2072 | mRNA | 0.42 | 5 | 39003738 | 39022864 |
XR_002470092.2 | False | 2342 | mRNA | 0.43 | 7 | 39003738 | 39022864 |
XR_002470093.2 | False | 2339 | mRNA | 0.43 | 7 | 39003738 | 39022864 |
XR_002470094.2 | False | 2240 | mRNA | 0.42 | 6 | 39003738 | 39022864 |
XR_002470095.2 | True | 2237 | mRNA | 0.42 | 6 | 39003738 | 39022864 |
38,984,000
38,988,000
38,992,000
38,996,000
39,000,000
39,004,000
39,004,000
39,008,000
39,012,000
39,016,000
39,020,000
39,024,000
NC_048585.1
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gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
alox12 | LOC106608934 | coding | upstream | 17505 | 38969383 ~ 38986233 (+) |
LOC110500354 | LOC106608903 | coding | upstream | 35861 | 38956139 ~ 38982550 (+) |
arrb2b | LOC106608931 | coding | upstream | 64619 | 38867935 ~ 38939119 (+) |
hmgb3a | LOC106608930 | coding | upstream | 139208 | 38857116 ~ 38864530 (+) |
LOC110500344 | LOC106608928 | coding | upstream | 264030 | 38726432 ~ 38739708 (+) |
LOC118942927 | NA | coding | downstream | 115678 | 39138542 ~ 39154522 (+) |
nat16 | LOC106608942 | coding | downstream | 156283 | 39179147 ~ 39211035 (+) |
LOC110500362 | LOC106608944 | coding | downstream | 205784 | 39228648 ~ 39237917 (+) |
nat16l | LOC106608945 | coding | downstream | 222967 | 39245831 ~ 39256597 (+) |
LOC110500364 | LOC106608946 | coding | downstream | 300001 | 39322865 ~ 39331908 (+) |
G1735932 | pelp1 | non-coding | upstream | 48337 | 38943178 ~ 38955401 (+) |
G1735820 | NA | non-coding | upstream | 333815 | 38669409 ~ 38669923 (+) |
G1735778 | NA | non-coding | upstream | 375329 | 38592329 ~ 38628409 (+) |
G1735986 | NA | non-coding | downstream | 11645 | 39034509 ~ 39178178 (+) |
G1736042 | NA | non-coding | downstream | 81091 | 39103955 ~ 39105859 (+) |
G1736065 | NA | non-coding | downstream | 120846 | 39143710 ~ 39144316 (+) |
G1736093 | NA | non-coding | downstream | 168578 | 39191442 ~ 39191854 (+) |
LOC110500301 | LOC106609063 | other | upstream | 921464 | 38076983 ~ 38083972 (+) |
G1734961 | NA | other | upstream | 957232 | 38045108 ~ 38046506 (+) |
G1734960 | NA | other | upstream | 958672 | 38043091 ~ 38045066 (+) |
cited1 | LOC106609035 | other | upstream | 1240480 | 37758759 ~ 37765562 (+) |
G1736098 | NA | other | downstream | 210800 | 39233664 ~ 39289670 (+) |
G1736484 | LOC106608963 | other | downstream | 852892 | 39875756 ~ 39876950 (+) |
G1737353 | NA | other | downstream | 1039842 | 40062706 ~ 40063325 (+) |
LOC110500409 | LOC106599480 | other | downstream | 1378640 | 40401452 ~ 40404840 (+) |