Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110500362 |
| gene name | LOC106608944 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 39228648 ~ 39237917 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC109896860 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036957789.1 | False | 1916 | mRNA | 0.49 | 7 | 39228648 | 39237917 |
| XM_036957788.1 | True | 1949 | mRNA | 0.49 | 7 | 39228651 | 39237917 |
39,220,000
39,222,000
39,224,000
39,226,000
39,228,000
39,230,000
39,232,000
39,234,000
39,236,000
39,238,000
39,240,000
39,242,000
NC_048585.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nat16 | LOC106608942 | coding | upstream | 17613 | 39179147 ~ 39211035 (+) |
| LOC118942927 | NA | coding | upstream | 74302 | 39138542 ~ 39154522 (+) |
| zgc:92664 | LOC106608937 | coding | upstream | 205784 | 39003738 ~ 39022864 (+) |
| alox12 | LOC106608934 | coding | upstream | 242415 | 38969383 ~ 38986233 (+) |
| LOC110500354 | LOC106608903 | coding | upstream | 260771 | 38956139 ~ 38982550 (+) |
| nat16l | LOC106608945 | coding | downstream | 7914 | 39245831 ~ 39256597 (+) |
| LOC110500364 | LOC106608946 | coding | downstream | 84948 | 39322865 ~ 39331908 (+) |
| zanl | LOC106608949 | coding | downstream | 182213 | 39420130 ~ 39453254 (+) |
| trnaw-cca-56 | NA | coding | downstream | 332739 | 39570656 ~ 39570727 (+) |
| mpdu1b | LOC106608952 | coding | downstream | 357250 | 39595167 ~ 39600315 (+) |
| G1736093 | NA | non-coding | upstream | 36794 | 39191442 ~ 39191854 (+) |
| G1735986 | NA | non-coding | upstream | 50470 | 39034509 ~ 39178178 (+) |
| G1736065 | NA | non-coding | upstream | 84332 | 39143710 ~ 39144316 (+) |
| G1736042 | NA | non-coding | upstream | 122789 | 39103955 ~ 39105859 (+) |
| G1736133 | NA | non-coding | downstream | 58145 | 39296062 ~ 39302368 (+) |
| G1736154 | ap1s1 | non-coding | downstream | 102721 | 39340638 ~ 39362957 (+) |
| G1736209 | NA | non-coding | downstream | 212943 | 39450860 ~ 39451178 (+) |
| G1736377 | NA | non-coding | downstream | 466691 | 39704608 ~ 39705136 (+) |
| G1736434 | NA | non-coding | downstream | 538514 | 39776431 ~ 39842962 (+) |
| arrb2b | LOC106608931 | other | upstream | 303720 | 38867935 ~ 38939119 (+) |
| LOC110500301 | LOC106609063 | other | upstream | 1146374 | 38076983 ~ 38083972 (+) |
| G1734961 | NA | other | upstream | 1182142 | 38045108 ~ 38046506 (+) |
| G1734960 | NA | other | upstream | 1183582 | 38043091 ~ 38045066 (+) |
| G1736484 | LOC106608963 | other | downstream | 637839 | 39875756 ~ 39876950 (+) |
| G1737353 | NA | other | downstream | 824789 | 40062706 ~ 40063325 (+) |
| LOC110500409 | LOC106599480 | other | downstream | 1163587 | 40401452 ~ 40404840 (+) |
| G1737866 | LOC103384823 | other | downstream | 1314094 | 40552011 ~ 40553853 (+) |
| G1738057 | LOC100194703 | other | downstream | 1755238 | 40955050 ~ 40997320 (+) |
