Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110500374 |
| gene name | LOC106609020 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 39571290 ~ 39579548 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transmembrane 4 L6 family member 4-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021577708.2 | False | 1704 | mRNA | 0.44 | 5 | 39571290 | 39579547 |
| XM_021577707.2 | False | 1702 | mRNA | 0.44 | 5 | 39571290 | 39579548 |
| TU1989338 | True | 782 | TUCP | 0.51 | 4 | 39571836 | 39579040 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500372 | LOC106608951 | coding | downstream | 11993 | 39555838 ~ 39559297 (-) |
| her8a | LOC106577899 | coding | downstream | 20162 | 39547572 ~ 39551128 (-) |
| trnal-aag-67 | NA | coding | downstream | 23966 | 39547243 ~ 39547324 (-) |
| gal3st4 | gal3st4 | coding | downstream | 36331 | 39482847 ~ 39534959 (-) |
| trappc14 | LOC106608950 | coding | downstream | 97475 | 39453536 ~ 39473815 (-) |
| trnaw-cca-57 | NA | coding | upstream | 6188 | 39585736 ~ 39585807 (-) |
| LOC110500375 | LOC106608953 | coding | upstream | 39831 | 39619379 ~ 39624943 (-) |
| LOC110500376 | LOC106608954 | coding | upstream | 66183 | 39645731 ~ 39655413 (-) |
| LOC118943025 | NA | coding | upstream | 68245 | 39647689 ~ 39652846 (-) |
| LOC118943027 | NA | coding | upstream | 70673 | 39650221 ~ 39650356 (-) |
| G1737086 | NA | non-coding | downstream | 918 | 39570155 ~ 39570372 (-) |
| G1737015 | NA | non-coding | downstream | 88514 | 39481491 ~ 39482776 (-) |
| G1736994 | NA | non-coding | downstream | 143820 | 39426739 ~ 39427470 (-) |
| G1736838 | LOC106608942 | non-coding | downstream | 361805 | 39197694 ~ 39209485 (-) |
| LOC110500353 | NA | non-coding | downstream | 628220 | 38934413 ~ 38943112 (-) |
| G1737072 | NA | non-coding | upstream | 62598 | 39642146 ~ 39643552 (-) |
| G1737127 | NA | non-coding | upstream | 95023 | 39674571 ~ 39675221 (-) |
| G1737136 | acox3 | non-coding | upstream | 116872 | 39696420 ~ 39696910 (-) |
| G1737166 | NA | non-coding | upstream | 136619 | 39716167 ~ 39716767 (-) |
| G1735742 | NA | other | downstream | 1043471 | 38527292 ~ 38527819 (-) |
| G1735740 | NA | other | downstream | 1044551 | 38526383 ~ 38526739 (-) |
| G1735425 | NA | other | downstream | 1374918 | 38195980 ~ 38196372 (-) |
| G1735116 | LOC106609058 | other | downstream | 1798334 | 37766673 ~ 37772956 (-) |
| G1737209 | NA | other | upstream | 198408 | 39777956 ~ 39778850 (-) |
| LOC110500404 | pea15 | other | upstream | 640932 | 40220480 ~ 40285714 (-) |
| G1737718 | NA | other | upstream | 691270 | 40270818 ~ 40379678 (-) |
| G1738361 | NA | other | upstream | 918750 | 40493727 ~ 40514635 (-) |
| G1738532 | LOC100380853 | other | upstream | 1330306 | 40909854 ~ 40910618 (-) |
