LOC110500395 (plcg)


Basic Information

Item Value
gene id LOC110500395
gene name plcg
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 40086186 ~ 40102011 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577746.2
TGCGAGTTGTTGTTCTTATTTTTTACGCCATATGCATTGACACGAGCGCACATTTCGTATTAAATTCCTTGTATTAGAGTACAATAAATCAACGAATTTTTAAATTCGGATTCACATCTTCGATTTCACTTGGATCGTTTTCACTTTTGAACttgtttctttgtttcttttTATCCAACCAACTGTCGCACTCCCCCTATCCCTCGGACTGGTTTTGGCTCTCTGCATCTTGATAACGTAACATTTTGAGAGGCACTTTTATAACTTTTATATCACAACTTTTTACGCAACGCCAAATAGTTGCGGCGGAATTAAACTGTCGACGCACCGGGATATTCATCGCCATTCAGTGAATACCTCGCACATCAAACCTCAAAGGGTTAGTTTGAAATCTGGTTGGGTCTGACCTACTTTTTACAGATATTGAGTCTGTCAAGGCTTGCCTAGTCGCCATGGAGAGGCGGGACAGTCGCCAAGCAACATCCGATTACCCTCACCCATTTATACACAAACTGAAACTGACCAGGGCACAGAGAATACGGGGCATTGTGTTGGGCACCATCCTCTTCCCCATACGAATCTTCCTGGTCGCCCTCTGCTTTCTGATGATGTGGCCTATTGCCCGGCTGCGTTTGGCCGGCTTGTCAGAGGAGGAACGCTCCCGGCCAGTAGTGGCGGGGTGGCGTTGGTGGCTGCTACATTCCATCATCCGGTTCCTGAGCCGGGCAGCGTTTTTCTTCCTGGGGTTCTGGGTCCGGGTTAAAGGACGTAGGGCAGGACGTAAGGAGGCTCCTGTGCTGGCAGTGGCGCCTCACAGTAGCTTCCTGGACATGTTGGTACTGCCGGAAACCCAGTTAGCTACAGTGGTGTCCCGATCGGAAAACCAAAAAATCCCTGTTATAGGGGCCCTCCTGGAGTTTAACCAGTCAGTGATGGTAAATAGGAAGAATCCAGAGTCCAGGAAACAAGCTATTGCGCAGATCATAGAGAGGCTCACCTCCAACGGCTACTGGCCACAGatgCTGATGTTCCCAGAAGGCACCACTACGAACGGCACCATTCTCATCAAGTTTAAACGTGGTGCCTTCCTGGCTGGAGTCCCAGTCCAACCAGTCCTGCTGCACTACCCCAACAAACTGGATACTGTGCGCTGGACCCACAAGGGCACAACCTGGATTGAGACACTGTGGCACACCTGCTCTCAGCTCTACACTAACGTTACTGTTGAGTATCTGCCAGTATACACCCCCTCTCAGGAAGAGAAGGATGACCCTAACCTGTATGCAGACAATGTCCAGAAACTCATGGCCAAGACTCTGGGTATCCCAGCTACAGACCATGTGATGGAGGGGCGTGTTCCTACCAGAATGCTAGGGGGGCTCTCCCTCCCCCTAGAACCCCCAGCCAGAGAAACCCTCTCACTGCTGCACAAAGACGGtCTCAGAGAGTCAGAGGTTGAGGCGGCACTAACTCAGATGATTGACCGTTGTCAGTccgaacagggttggagggctgTTGTGGATGAGCTGGTCCCTCTTatgggactgactgacagacagactgctgCTAAGATCTGTGGTCTCTACTCAAAGGATGACAAGGTGGATCTCAGACAGATCTATCTAAGTGTTGCAGCTGTCTCCAGCTTTATGGACTTCAAGTCTCTCCTTCACATCGCCTTCACTctgtATGACAGAGAGGGTAGTGGCAGTCTGACAGCGGTGGATGTGTCTGACCTGATGGGGGCGCTAGTGGGGAGTCCTCAATACCACACAGAGGAGCTGTACTCAGAACTGTCCCGGAGAGGCGTGCCCACTGAACAGGAGCTGTTCAGAGTGCTGACCACCCATCCCACCTATCAGAAGCTGATCAGTGAGTACCTCACATCTGAGGGGGCTGAGTCTACAACACCATCTACTCCTCTGTTCAATGGGAAGGTTGGGAACAATAATGAAGGATTGCCTAACGACAACAGATCGGCGTTGTTTCATAAAACCGCTGATAACAGCTCGGCTCTACCCCACAAGAAGGATGACTAAGTGAAGGAACTCTGAAGCATAGTAATTGAATTCCTGACTGGGCAGTCTAATTACTGTGATCTGAAGGGCTATGTCCCTTCTAGAAATTATATTTATGTACTCTGAAGGCTAGTCTGTTGCTGGCTATGTCTCCAATGACACCCAATGATGACTTTGATGGCGAATCCCCTTCTAGGAATTATATTTCAATGAGGCTTACACTGTTTTGAGAAATGGAGAAAACCTGCACAAAGCAgctctacagtatctacagtaagCCCCATAGATGTTAAATGGAATATATGTCATGACTAGTTTGTGTGAGTCTCAGATTAGTTATATATTGTTTACAATGTACATAGCTAGCTATGATTATTTCACGCAGTTCCGAGTTTGTTCGTCAAGATGCTGTGAAAATAGTATCACAATAGTTATTTATAAATGTGATGTTTTAATAAAATTAAGAGTTCTTGTATTTTGTACTGCTTGAAAGAGATGTGGTATGTGAataatttgtattgtttaaagAACAAAATATATAAACCAAATGTAAATGACAA

Function

NR:

description
lysophospholipid acyltransferase LPCAT4-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016746 transferase activity, transferring acyl groups molecular_function

KEGG:

id description
K13512 LPCAT4, AGPAT7; lysophospholipid acyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577746.2 True 2578 mRNA 0.47 13 40086186 40102011

Neighbor

gene id symbol gene type direction distance location
tmm85 emc4 coding upstream 25488 40053881 ~ 40060698 (+)
LOC110500394 LOC106608969 coding upstream 35541 40002898 ~ 40050645 (+)
LOC110500393 LOC106608968 coding upstream 88245 39972319 ~ 39997941 (+)
LOC110500392 LOC106608967 coding upstream 126956 39953279 ~ 39959230 (+)
LOC110500831 NA coding upstream 133385 39945263 ~ 39952801 (+)
LOC110500396 NA coding downstream 10965 40112976 ~ 40116217 (+)
LOC110500397 LOC106608972 coding downstream 16280 40118291 ~ 40133485 (+)
LOC110500398 LOC106608973 coding downstream 35615 40137626 ~ 40158575 (+)
LOC110500400 LOC106608974 coding downstream 64081 40166092 ~ 40194474 (+)
LOC118942929 NA coding downstream 153979 40255990 ~ 40257045 (+)
G1737372 NA non-coding upstream 6601 40079346 ~ 40079585 (+)
G1737370 NA non-coding upstream 8175 40077633 ~ 40078011 (+)
G1737351 NA non-coding upstream 24282 40061664 ~ 40061904 (+)
G1737345 NA non-coding upstream 33163 40052766 ~ 40053023 (+)
G1737344 NA non-coding upstream 34420 40051449 ~ 40051766 (+)
G1737318 NA non-coding downstream 570 40102581 ~ 40102871 (+)
G1737385 NA non-coding downstream 5060 40107071 ~ 40107333 (+)
G1737391 NA non-coding downstream 10081 40112092 ~ 40112291 (+)
G1737353 NA other upstream 22861 40062706 ~ 40063325 (+)
G1736484 LOC106608963 other upstream 209236 39875756 ~ 39876950 (+)
G1736098 NA other upstream 796516 39233664 ~ 39289670 (+)
nat16 LOC106608942 other upstream 876701 39179147 ~ 39211035 (+)
arrb2b LOC106608931 other upstream 1161258 38867935 ~ 38939119 (+)
LOC110500409 LOC106599480 other downstream 299493 40401452 ~ 40404840 (+)
G1737866 LOC103384823 other downstream 450000 40552011 ~ 40553853 (+)
G1738057 LOC100194703 other downstream 891144 40955050 ~ 40997320 (+)
G1738119 NA other downstream 922699 41024710 ~ 41029136 (+)
G1739103 NA other downstream 1786800 41888811 ~ 41897856 (+)

Expression


Co-expression Network