XLOC_036277


Basic Information

Item Value
gene id XLOC_036277
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 13714942 ~ 13716577 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072011
AAAAGGGGCCCGATGGTTCTAGAGCCAATCAGCTGCTGAACATATTTATATGATAAGAAAGAAGCCTGCTACAAGAGAGACAGTGGAAGGGAGCCTCCAAGACATTTTTATTAGGATCTGCTAATCATGAGGGGGCAGACAAAAGAAAttgcattttccttcagcttaatatcaggggttgccacagcggaagaaTCTGGATAttactttggcatatgttttacacagcaaatggcctcccagctgcaacccagcactgtgaaacacccatacactcttgcattcacagacACTTCTACACAATGTTCAAATTCACCTAaagtatagcgcatgtgtttggactgaggtgGAGACCCAcaccaaaacagggagaacatgcaaactccacacagtaatgccaactgacccagcctggacttgaaccaccaacctttttgctgtgaggtgacaggctgagccactgtgctgccccagtGTAGTTGTTAATAACTTCCAGATATTTTACAGTttgattttgtaataataatgtatgtttacatttattgtaatatgttaatatttattcacAATGTAATTACTTTGTTATATTAAcgttaaatgttatattaatgttataatatattataataaataattataataatgttaaattataaataatacaataatttttataatg

Function

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072011 True 679 lncRNA 0.37 2 13714942 13716577

Neighbor

gene id symbol gene type direction distance location
XLOC_036276 si:dkey-258f14.3 coding downstream 36527 13653699 ~ 13678415 (-)
XLOC_036274 b3gnt3.4 coding downstream 73920 13630492 ~ 13641022 (-)
XLOC_036273 b3gnt3.3 coding downstream 114668 13597405 ~ 13600274 (-)
XLOC_036272 b3gnt3.2 coding downstream 140178 13572531 ~ 13574764 (-)
XLOC_036271 b3gnt3.1 coding downstream 173428 13534385 ~ 13541514 (-)
XLOC_036278 cabp4 coding upstream 78208 13794785 ~ 13823098 (-)
XLOC_036279 CT025854.2 coding upstream 161151 13877728 ~ 13877845 (-)
XLOC_036280 serping1 coding upstream 244078 13960655 ~ 13972626 (-)
XLOC_036281 igf3 coding upstream 261909 13978486 ~ 13985032 (-)
XLOC_036282 si:dkeyp-110g5.4 coding upstream 274720 13991297 ~ 13999293 (-)
XLOC_036263 NA non-coding downstream 408894 13302679 ~ 13306048 (-)
XLOC_036261 BX119975.1 non-coding downstream 475850 13238973 ~ 13239092 (-)
XLOC_036253 NA non-coding downstream 1004718 12686691 ~ 12710224 (-)
XLOC_036251 NA non-coding downstream 1045530 12451451 ~ 12669412 (-)
XLOC_036286 BX248385.1 non-coding upstream 376217 14092794 ~ 14094516 (-)
XLOC_036294 BX294388.2 non-coding upstream 697776 14414353 ~ 14452438 (-)
XLOC_036296 NA non-coding upstream 758192 14474769 ~ 14482457 (-)
XLOC_036297 NA non-coding upstream 774716 14491293 ~ 14495346 (-)
XLOC_036252 CU639468.2 non-coding downstream 1102054 12612772 ~ 12612888 (-)

Expression


Co-expression Network