LOC110500443 (LOC106608913)


Basic Information

Item Value
gene id LOC110500443
gene name LOC106608913
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 41609250 ~ 41615747 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956508.1
acacacacacacacacacacacacaaaatatagtACATGAACAATAGCCCTGATACACATCACATATACAGATACATGTAAATACATCCATAAACAACACAATAACAAACATATCTATGTAGACAGTAGCTAAAAGTATTACTCATAACAGAACcatgtgaggttgtgtgtgtgtgtgcgtttgtgtgttagTGAGAATAATCTCTAGAATATTACTTTGCTTTTCTGTGTACGGTGAAGTGGTGTGATCTAAGCATGAAGTGGTGTGATCTAAGCAGACTGTCATCATATAGGAAGTAGAGGAGTTTGTTAGAAGGACTGTAGTTGTAGAGAAAGTCACTTGTCTGTGGGGACAGAATGGAGCACACCTTGTTCTGTTTGCTACTATTGCTGAGTACACACATCTACTCTGGACACTCTGAAGACGATGATGGACAGGCAAAGGCTGTTCTGACCAAACACCCCAAACCCTCCCAGATATTCAGTGGAGAATCTGTCACTCTCAGATGTACCATACAGAGGGGAAAAGTCACTGACTGGAAATACACATGGAGCAAGGATGGTGTAGACTTACCCAGTCGGAAGCATAAATATGAGATCAGTGGGGATAATATTTCAAACAGTGGTGACTACAGGTGTCTGGGTAAACATATTGGTAATGGGACGTATTCTGAGTGGAGTGATGTAGTCAGACTGACAGTGACAGCTCTGCCTACAGCCTCAGTGAAGATGGTCACTACCCAGGAGACACTGTATTCTGGAGACACAGTCAAGCTGCAGTGTGTCATATCAAACTACACAGACTGGACGTACCACTGGTTAATAAATAAAGAACGGCTTTCTAGTCAGACCAGTAAAaccaccaccatctctctctctgatcaggCTGGTCAGTACCAGTGTCAGGGGACAAGGACAAGACGGCCCCAAAATTCATATCTCAGCTCATCTCTCCACATTAGTGTCACTACTCTTCCTGAAACTACACTGAGCGTGTATCCAAACCCTGCATACACTGGAAAGACAGTAACTCTGACGTGTTCAGTGGGGTCTGACAGTGGCTGGAGGTATATATGGTACAAAGACAACACTAAGAAAGTAGTGACCTTGTCTGGCAGACACACTACAACAGGAGCCACCTTCACCATCAGTAGTGCTGCTGAGTCTGACCAGGGTCTCTACTGGTGTCAGGGAGAGATCCAGTCCAGATCCATATCATCAATCATCAGCGATCCTGTCACTATCACTGTGAAAgAGAGACCTGCGGCTGTTCTGACCCTCCAACTCAACTGGCCCCAGATTTTCAGTGGAGAGACTGTCACTCTCAGATGTGACATACAGGGGGGAGAAAAGATTGAGTATGCTTTTTATAACAGTGGGATGTCGGTCTACACCAAAACAGAGCCTGAGTACAGAATCAGTCCTGCAAAGAATGGTCTATATACCTGTGAAGGTCTTCAGAAAAGAAATGGCTTAAAACACTCCCAGACAAGTAATGCTATACAATTGACCGTGTTAGATCAACCCCAAGCTGTCCTAAGTGTCTCTCCTCAGTGGCTGAACCCTGGAGACTCAGTTACTCTGAGCTGTGGGGTTAAAGAGTCATCTACAGGCTGGAGGTTCTTCTGGTACCAAACTGTTCCCTACACAGCTGGGTTACCCTCCCTATCAGAAAGGTCCTATTCTGTAGAGCCTCTATCTGGCAGTGGGACTAGTGAAGACTCCTACACTCTGATCCCTGCTGGTCCTAGTCACACAGGAGGATATGTGTgtagagcagggagaggagacccagtcTATGACACAATCTACAGTGAACCTCAGTTTTTCTGGTCAGGAGATCCGCAAACTTCAGTGTCTCTCAAAATAAGACCTAACAGAAATCAACACTTTACATCAAAGTCTCTCTCACTAAGCTGTGGGGAGAAGGGGAACTCTACTGGATGGAGActgaagagatacagagagaaagcagtggagtCAGGATGTGGCTCTAACTGGGGATCAATAGCAGGGTCCACATGTACCATCAGATTCACACGTAAAAAGGACAGTGGAGTTTACTGGTGTGAGTCTGGATCAGGAGAGTACAGTAATGCTGTCAACATCACAGTGGCTGATGGCCCTCTGATCCTGGAGAGCCCTGCCTATCCCATAACTGAGGGAGACTCTGTGACTCTACGCTGTACAAATAGAAATCAGGAAACAAAACCGAACCCCAAGGTTGATTTCTACAAAGATGGAGTACTCATCAGGAATGAGACCACAGGAGAAATGACCATCCCTGCAGTGTCCAAGTCAGATGAAGGCTCCTATAAGTGTACATCTATTAAAGTAATATCACCAGAGAgctgggtgacagtgagagGCGTAACTCCTGGACCCTCTACATCAGTCCTAGTAGGAGTGGTTGTGGGCCTGGTTGTTGCTGGTGTTCTACTGGCCATTCTCCTGGTACTGCTGTGTCGATATAAAAAAGCCAAAAGGTGA

Function

NR:

description
Fc receptor-like protein 5 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956508.1 True 2490 mRNA 0.46 10 41609250 41615747

Neighbor

gene id symbol gene type direction distance location
LOC110500843 LOC106609004 coding upstream 7784 41584808 ~ 41601466 (+)
LOC110500434 LOC106609000 coding upstream 342883 41257323 ~ 41266367 (+)
LOC110500837 LOC106608998 coding upstream 362117 41224772 ~ 41247133 (+)
prkd4 LOC106608995 coding upstream 393261 41203290 ~ 41215989 (+)
LOC110500431 LOC106608996 coding upstream 408129 41184269 ~ 41201121 (+)
LOC110500439 LOC106609016 coding downstream 27260 41643007 ~ 41672302 (+)
LOC110500440 LOC106609014 coding downstream 60499 41676246 ~ 41688377 (+)
LOC110500441 LOC106609015 coding downstream 72698 41688445 ~ 41693821 (+)
LOC110500937 LOC106609011 coding downstream 133778 41749525 ~ 41755052 (+)
trnan-guu-128 NA coding downstream 163120 41778867 ~ 41778940 (+)
G1738831 NA non-coding upstream 68108 41540893 ~ 41541142 (+)
G1738829 NA non-coding upstream 70556 41538492 ~ 41538694 (+)
G1738824 NA non-coding upstream 73905 41527669 ~ 41535345 (+)
G1738291 NA non-coding upstream 83431 41390347 ~ 41525819 (+)
G1738892 NA non-coding downstream 104656 41720403 ~ 41720637 (+)
G1738893 NA non-coding downstream 105933 41721680 ~ 41722008 (+)
G1738924 NA non-coding downstream 153036 41768783 ~ 41769071 (+)
G1738925 LOC100380853 non-coding downstream 153754 41769501 ~ 41769847 (+)
G1739070 NA non-coding downstream 163080 41778827 ~ 41787548 (+)
G1738119 NA other upstream 580114 41024710 ~ 41029136 (+)
G1738057 LOC100194703 other upstream 611930 40955050 ~ 40997320 (+)
G1737866 LOC103384823 other upstream 1055397 40552011 ~ 40553853 (+)
LOC110500409 LOC106599480 other upstream 1205565 40401452 ~ 40404840 (+)
G1737353 NA other upstream 1545925 40062706 ~ 40063325 (+)
G1739103 NA other downstream 273064 41888811 ~ 41897856 (+)
cxcl8c cxcl8c other downstream 669309 42285056 ~ 42288500 (+)
si:dkey-185m8.2 LOC106608874 other downstream 738830 42354556 ~ 42370239 (+)
G1739440 vax2 other downstream 885602 42501349 ~ 42502357 (+)
G1740312 r1441 other downstream 1639906 43255653 ~ 43327738 (+)

Expression


Co-expression Network