XLOC_036287 (si:ch211-229n2.6)


Basic Information

Item Value
gene id XLOC_036287
gene name si:ch211-229n2.6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 14096167 ~ 14104317 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070923
GTGTGGCCACGCTTTAAAGGCTTGGCAGAGAAACTTAATTCCTTTCGCATGCAGTTTCTACTCTTAACGTCTTAAACAGGAGAGATGGACTACCAGGAACAGGTTGAAAATGTTATATCCAGTGCGCAGCTCGGAGATTTAATCGAGTTCGCGTATCCCATTGGCTACTCACACTGGGGCGTGTACGAGGGAGATGGATACGTCGTGCACTTTGCTGTTGCTgATGAAAGTAAGGTGATGAGTAAATTTCGGGGATTTCTGCAGACCATCTTCCCTGCTTGTGGTGATCTTCTGCTGGGAGAAACTAAGATACGGCGTCAGCTTCTGTCAGAAGTAAACGTACCTAAAGGAGCGATTGTTTCAGTAAGCAATAGCCAGCACGATCTACAACCTTCACCTCCAGAAGAAATCAGAGGAAGACTAAATGGCTTAGTGAACAAGGAGTTCACTTACAAACTCCTCACTTTTAATTGTGAACACTTTGCCACATTTGTCCGCTCTGGAAAAGCTGTGTGCAATCAGATTCcaggaaaagaaaaagacaatgAATGTGTGGAGGCTACAAAACTATTTAGTCTCTTTGTGCCAGCATGCTGACCTACTGAATGCCAAAGTAGAGATTAGcacaaaaataatttgttttattatgaatattttacCACACAACTCAAATGCttccagaatgtttttttttctatctttccTAATATTCTTCTTCAATGACACAAGATGTCTTCAGTATCGCTTGCATTTTTTTGCCAGTTAGATCTGTTGGCTGATTTTAGGCACTTTGGAGAGAGTTTGCAGCTAAACAATCTTTTTTATTTCCAGAAAGAATGTAATCAAATTGTATGAAGAATAGTTTTTTTCTGACTGTCCCTTTTCACTTTTTAAACTGGCATGGCACATATCTTTACTTATATTTTCAACTGCATACAGTacttatatttgtgtgtatagaGGTAGcctcactgtaaaacccaataagtgaaggttaaggaaactgattgcaacaaaccatttaagtttaagaactaatcctaatgagtactgtgaactaaatccatttgagtaaacaaagcaatttgagcgcAGTAAACCCCAATA

Function

symbol description
si:ch211-229n2.6 Predicted to enable N-acyltransferase activity; phospholipase A1 activity; and phospholipase A2 activity. Predicted to be involved in N-acylphosphatidylethanolamine metabolic process. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0070292 N-acylphosphatidylethanolamine metabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0016410 N-acyltransferase activity molecular_function
GO:0004623 phospholipase A2 activity molecular_function
GO:0008970 phospholipase A1 activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081105-166 Predicted to enable N-acyltransferase activity; phospholipase A1 activity; and phospholipase A2 activity. Predicted to be involved in N-acylphosphatidylethanolamine metabolic process. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000092122

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070923 True 1107 mRNA 0.39 4 14096167 14104317

Neighbor

gene id symbol gene type direction distance location
XLOC_036286 BX248385.1 coding downstream 1651 14092794 ~ 14094516 (-)
XLOC_036285 si:ch211-229n2.7 coding downstream 4281 14085894 ~ 14091886 (-)
XLOC_036284 dedd coding downstream 15633 14058185 ~ 14080534 (-)
XLOC_036283 atp2b3a coding downstream 43818 14003232 ~ 14052349 (-)
XLOC_036282 si:dkeyp-110g5.4 coding downstream 96874 13991297 ~ 13999293 (-)
XLOC_036288 bgna coding upstream 179 14104496 ~ 14126646 (-)
XLOC_036289 si:dkey-6n6.1 coding upstream 25928 14130245 ~ 14151051 (-)
XLOC_036290 rhoaa coding upstream 66250 14170567 ~ 14184423 (-)
XLOC_036291 def6a coding upstream 80978 14185295 ~ 14209852 (-)
XLOC_036292 sin3b coding upstream 107429 14211746 ~ 14239023 (-)
XLOC_036279 CT025854.2 non-coding downstream 218322 13877728 ~ 13877845 (-)
XLOC_036277 NA non-coding downstream 379590 13714942 ~ 13716577 (-)
XLOC_036263 NA non-coding downstream 790119 13302679 ~ 13306048 (-)
XLOC_036261 BX119975.1 non-coding downstream 857075 13238973 ~ 13239092 (-)
XLOC_036294 BX294388.2 non-coding upstream 310036 14414353 ~ 14452438 (-)
XLOC_036296 NA non-coding upstream 370452 14474769 ~ 14482457 (-)
XLOC_036297 NA non-coding upstream 386976 14491293 ~ 14495346 (-)
XLOC_036300 NA non-coding upstream 678897 14783214 ~ 14790721 (-)
XLOC_036301 NA non-coding upstream 973719 15078036 ~ 15081665 (-)

Expression


Co-expression Network