Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118943017 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 43115901 ~ 43116019 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005038754.1 | True | 119 | mRNA | 0.51 | 1 | 43115901 | 43116019 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| efs | LOC106608851 | coding | upstream | 3420 | 43098737 ~ 43112481 (+) |
| tinf2 | LOC106608852 | coding | upstream | 36758 | 43074285 ~ 43079143 (+) |
| LOC110500484 | LOC106608853 | coding | upstream | 53527 | 43058512 ~ 43062374 (+) |
| gmpr2 | LOC106608854 | coding | upstream | 60821 | 43041766 ~ 43055080 (+) |
| LOC110500480 | LOC106608857 | coding | upstream | 80938 | 43002686 ~ 43034963 (+) |
| LOC118943016 | NA | coding | downstream | 2591 | 43118610 ~ 43118728 (+) |
| LOC118943019 | NA | coding | downstream | 6073 | 43122092 ~ 43122193 (+) |
| LOC110500494 | LOC106608896 | coding | downstream | 42838 | 43158688 ~ 43161693 (+) |
| LOC110500496 | LOC106608847 | coding | downstream | 87520 | 43203539 ~ 43219682 (+) |
| LOC118942803 | LOC106608806 | coding | downstream | 106320 | 43222339 ~ 43232208 (+) |
| G1740211 | NA | non-coding | upstream | 127620 | 42987765 ~ 42988281 (+) |
| G1740210 | NA | non-coding | upstream | 130524 | 42985101 ~ 42985377 (+) |
| G1740209 | NA | non-coding | upstream | 130895 | 42984551 ~ 42985006 (+) |
| G1740206 | NA | non-coding | upstream | 134109 | 42981453 ~ 42981792 (+) |
| G1740162 | NA | non-coding | upstream | 200171 | 42915508 ~ 42915730 (+) |
| G1740274 | NA | non-coding | downstream | 53244 | 43169263 ~ 43169540 (+) |
| G1740276 | NA | non-coding | downstream | 55357 | 43171376 ~ 43171589 (+) |
| G1740299 | NA | non-coding | downstream | 83888 | 43199907 ~ 43200289 (+) |
| G1740301 | NA | non-coding | downstream | 86403 | 43202422 ~ 43202626 (+) |
| G1739440 | vax2 | other | upstream | 613544 | 42501349 ~ 42502357 (+) |
| si:dkey-185m8.2 | LOC106608874 | other | upstream | 760574 | 42354556 ~ 42370239 (+) |
| cxcl8c | cxcl8c | other | upstream | 827401 | 42285056 ~ 42288500 (+) |
| G1739103 | NA | other | upstream | 1218045 | 41888811 ~ 41897856 (+) |
| G1738119 | NA | other | upstream | 2086765 | 41024710 ~ 41029136 (+) |
| G1740312 | r1441 | other | downstream | 139634 | 43255653 ~ 43327738 (+) |
| LOC110500499 | ubil | other | downstream | 151195 | 43267057 ~ 43268143 (+) |
| G1740366 | LOC106608832 | other | downstream | 273170 | 43389189 ~ 43390299 (+) |
| G1740398 | NA | other | downstream | 331031 | 43447050 ~ 43451167 (+) |
| G1740412 | LOC106608825 | other | downstream | 353799 | 43469818 ~ 43470325 (+) |
