LOC110500847


Basic Information

Item Value
gene id LOC110500847
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 43405498 ~ 43409042 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110500847
ATGTCGCATACATGGTGCAACATCCAGGCACACAGGAAGCACCAGGATTCTCTGCGAGAGAGACTGAAGAGGCGGCAGAAAGACCCCACACAACTCGCGCCCATCACCCATGGCTGCATCCAGAGTCTGCTGCTCAAGTTCTCTGTCCCGGAGCTCTTCGAAGTAAGCCAGCCGTCTATGGGCACCTCTTCCTCCACGCTAGTCATCTCCGTGGACCACACACAACTCTGTGTCATGATTGGGGGTGGGGCCTTAGCTCAGAGAATGGGGCCCAAGAGCATTTCCGgcATCACCAACAAGCATACAGACGAGAGTCTTGAAGACTGCTCTTTCCTCAGCACCTGTTTCCACATGGACacctgtaaatacagtatgtgcaCTAGGGGATCGACAGCCTCCAGAGGCAGAGGGGGGTCTGATGGGTTCCCAAGTTTGGGACATGGAGGTGGGACTATACCAGGGAGAAGAAGACGGCAATGTGGAGAAACTGTTCCCCCCTCagTGGATCTGTTGTGGCATCCGTGTCCTGGAAAAGTTATCTGTGGTGATGGCCGACCCTCCCTGGGACATCCACATGGGGCTGCCCTATGGAACTCTGACGGACATTGAGATAAGGAAGCTCCACACCCCCTTCCTCCAGGACGACGGCCTCCTTTTCCTCTGGGTGACAGGCAGGGCTATGGAGTTGTGTGTAGAATGTGTTTCTTTTGGGGGCTATGAGCGTGTTGATGAGATCATTTGGTTGAAGACCAACCAGTTACAGCGATTTTGGCATGTATTGTGATATtgtattgatgtgtgtgtttctcctcagGTAGGTGTGACTGAAAGCCCCCAGGGATTCAAGAGGGCTGgactgtgatgtcattgtggcCAAGGTGCATTCCATCAACCACAAGCCAAATGAGATCTGTGGGATGATTGATACTTTCACCTGGTAGCCAGGAGATTGAGCTCTTGTGAGGCAGACCTCACAATGTCCAACCCAACTTGTACGTGTCTCTATACCTCTTGAACTCTGATCACCTCTTGGACCCTGACGTTGTGGCTCGCTTCCGGAACTGCCACCCAGACGGAGTCATTTGCAAACCAAAGAACATTTAGAGAGTCGTATGTCGGACTgtcttcagtt

Function

NR:

description
N6-adenosine-methyltransferase 70 kDa subunit

GO:

id name namespace
GO:0006139 nucleobase-containing compound metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110500847 True 1132 mRNA 0.52 9 43405498 43409042

Neighbor

gene id symbol gene type direction distance location
LOC118942788 NA coding upstream 751 43397554 ~ 43404747 (+)
LOC110500510 ccnb1ip1 coding upstream 20420 43382881 ~ 43385078 (+)
oxa1l LOC106608836 coding upstream 51061 43346414 ~ 43354437 (+)
LOC110500504 NA coding upstream 59719 43335680 ~ 43345779 (+)
LOC110500503 LOC106608839 coding upstream 81624 43305093 ~ 43323874 (+)
LOC118942933 NA coding downstream 603811 44012853 ~ 44019901 (+)
LOC110500517 LOC106608821 coding downstream 630910 44039952 ~ 44050765 (+)
pop7 pop7 coding downstream 688895 44097937 ~ 44099926 (+)
LOC110500520 LOC106608811 coding downstream 717040 44126082 ~ 44154069 (+)
ufsp1 ufsp1 coding downstream 717632 44126674 ~ 44128053 (+)
G1740367 LOC106608832 non-coding upstream 19266 43385227 ~ 43386232 (+)
G1740345 NA non-coding upstream 33669 43344536 ~ 43371829 (+)
G1740340 NA non-coding upstream 71805 43333476 ~ 43333693 (+)
G1740339 NA non-coding upstream 72931 43332130 ~ 43332567 (+)
G1740388 NA non-coding downstream 21241 43430283 ~ 43432161 (+)
G1740411 NA non-coding downstream 53811 43462853 ~ 43463081 (+)
G1740408 NA non-coding downstream 55788 43464830 ~ 43466342 (+)
G1740415 LOC106608825 non-coding downstream 66821 43475863 ~ 43476299 (+)
G1740416 LOC106608825 non-coding downstream 67987 43477029 ~ 43477252 (+)
G1740366 LOC106608832 other upstream 15199 43389189 ~ 43390299 (+)
G1740312 r1441 other upstream 77760 43255653 ~ 43327738 (+)
LOC110500499 ubil other upstream 137355 43267057 ~ 43268143 (+)
G1739440 vax2 other upstream 903141 42501349 ~ 42502357 (+)
si:dkey-185m8.2 LOC106608874 other upstream 1050171 42354556 ~ 42370239 (+)
G1740398 NA other downstream 38008 43447050 ~ 43451167 (+)
G1740412 LOC106608825 other downstream 60776 43469818 ~ 43470325 (+)
G1740453 NA other downstream 115694 43524736 ~ 43526726 (+)
G1740752 NA other downstream 803744 44212786 ~ 44213230 (+)
LOC110500528 tmem256 other downstream 1037518 44446186 ~ 44451532 (+)

Expression


Co-expression Network