ufsp1 (ufsp1)


Basic Information

Item Value
gene id ufsp1
gene name ufsp1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 44126674 ~ 44128053 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577931.2
TGTTAGGGAAGGGGGACAATCTATGTTTAAAATATTGAGAATGTGTAATCCATAAAATAGTGACCAATAACAAGCGCCTACGCCGCTTCAGAAAATGTTTCCCACCAAGCCCAGATAGGAACTCATTCGTCAACTTTTGCGGATAGAGGGAACTATTTCAGCGAAGAACTGATTCGCAGTTCTGACCAGACTAAAAAACTCCACGTATGTTTTTCCCTGTACATCGAATAATATTCAAGGTAAATGAAACAGGAAAACCGAGTAACAAAATTGCACTTCTACCTGGATTTTTAAGGTTTAGATTGAAGAAGAAAATGGCGTGCATCATGGAATGACAGCAGAATTTCCACATTGACAAGGGGTCTCAAGGATTGAAGACACATGGCTAATCTAGAGGAAAACATTTCTGAGCGGATTGACTGGGGTGAAAAGGCAGTGGTGGGAGAAAAACACAAAGGCACAGAGCGTAATGCAGattggacagggactctgctgaaTAATGCACACATTGGACTTCCTAGCCCAGCACCAGATgttgtcaaatgctccctaataTCTGGGGAGTGTCTCTACTTCCACTATGGGTGTGATGGTCAGGACGACAGGGGCTGGGGCTGTGGCTACCGCACCTTACAGACCATGGCCTCTTGGCTGTGCCAGAGCTGGGCCCCACCACCACCTAAGGGCAAATGCAGACCCCCACCCAGCCTCCCCGAAATCCAGCACGCCCTGGTCGCAATGGGGGACAAGCTTGCCATGTTCGCTGGCTCTCGCGAGTGGATAGGGACGTTTGAGGCGGCCCTGGTCCTGGACTACTACTACGACGTCCCCTGTAAGGTTGTCCACGTGCGGGGTGGAGGGGTAGAACTAGAGAGAGCTGCTGAGGAGCTCCACCAGCACTTCCAGAGCCAGGGGTCTCCTGTCATGATGGGAGGCGACCGGGACAACTCCTCCAAGGGGATCCTGGGTGTGTGCACTCGGCCTGGGGGCCAGGGGAGCTACCTGCTGGTGATGGACCCTCACTACTATGGGCCCAGACTGGAGAGGACGTCGGTGCAGGGGCTGGGGTGGGTGTCGTGGAAAAAAGTAGGGTCGCTGGATCATAGCTCTTTCTATAACTTGTGTCTGCCTCAGACTTCCCGGAAATGAAACGGACAAGGACAGATCAGTGGGAAAAGAAGCGTTTTCGTAAActcaggcagcccaattctgatttttttttccactaattgcaGCCAGATAGAATTCTTGTAAGGACTTAATTGGATAATCACTTTATTATATGTCTGTTGTAATTATCtgagaaaatattttaaaaataatacGTATTTGAAAGAGAACATCTGTTATGATCCACAAATAAAGATATGTTAAATATAT

Function

symbol description
ufsp1 Orthologous to human UFSP1 (UFM1 specific peptidase 1 (inactive)).

NR:

description
inactive Ufm1-specific protease 1

GO: NA

KEGG:

id description
K24154 UFSP1; Ufm1-specific protease 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577931.2 True 1380 mRNA 0.48 1 44126674 44128053

Neighbor

gene id symbol gene type direction distance location
pop7 pop7 coding upstream 26748 44097937 ~ 44099926 (+)
LOC110500517 LOC106608821 coding upstream 77086 44039952 ~ 44050765 (+)
LOC118942933 NA coding upstream 106773 44012853 ~ 44019901 (+)
LOC110500847 NA coding upstream 717632 43405498 ~ 43409042 (+)
LOC118942788 NA coding upstream 721927 43397554 ~ 43404747 (+)
LOC110500528 tmem256 coding downstream 318133 44446186 ~ 44451532 (+)
LOC110500529 LOC106608720 coding downstream 333285 44461338 ~ 44480565 (+)
LOC110500530 NA coding downstream 409891 44537944 ~ 44556711 (+)
LOC110500854 LOC106608721 coding downstream 472810 44600863 ~ 44667561 (+)
chrnb1 LOC106608722 coding downstream 551612 44679665 ~ 44703721 (+)
G1740699 NA non-coding upstream 83236 44043225 ~ 44043438 (+)
G1740698 NA non-coding upstream 85207 44041146 ~ 44041467 (+)
G1740697 NA non-coding upstream 86043 44040364 ~ 44040631 (+)
G1740649 NA non-coding upstream 209211 43917239 ~ 43917463 (+)
G1740731 NA non-coding downstream 31777 44159830 ~ 44160067 (+)
G1740735 NA non-coding downstream 42778 44170831 ~ 44171265 (+)
G1740736 NA non-coding downstream 44956 44173009 ~ 44173251 (+)
G1740738 LOC106608803 non-coding downstream 47139 44175192 ~ 44181626 (+)
G1740739 LOC106533889 non-coding downstream 61926 44189979 ~ 44190321 (+)
G1740453 NA other upstream 599948 43524736 ~ 43526726 (+)
G1740412 LOC106608825 other upstream 656349 43469818 ~ 43470325 (+)
G1740398 NA other upstream 675507 43447050 ~ 43451167 (+)
G1740366 LOC106608832 other upstream 736375 43389189 ~ 43390299 (+)
LOC110500499 ubil other upstream 858531 43267057 ~ 43268143 (+)
G1740752 NA other downstream 84733 44212786 ~ 44213230 (+)
fcer1g LOC106608748 other downstream 1316474 45444361 ~ 45449712 (+)
LOC110500870 LOC106608752 other downstream 1357219 45485247 ~ 45517233 (+)

Expression


Co-expression Network