XLOC_036301


Basic Information

Item Value
gene id XLOC_036301
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 15078036 ~ 15081665 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072409
catacatacatacaaaaaaagaCAGGATAAACGAGACAAACAGACATAAGTATTTATTTCTCAGTTGCTCTTGCTCCAAAACAAACCCCAGTATATAGTGGTCAACTTTGCCTCGCTGTACAGCACATTCACGCGAAAGAAAGCATTCACACCCGACAGCATTCACTCTCTATGACTCCAATTCAAATGCAACAGGGTAAAAAGTGCATCGATTAAGACCAGGGTCCTAAGAACTGACTTCAAACAGGAAAAGGAACTGGTTACAAAGAGATTACGGCACGGTTCTGAAAAGCAAAGCCTGAAAGTCACTTGCTtggttaagagaaaaaaaaaagagtcacaaTGGCACATTCATTCTGAAATAAAGATGTTAATACATACAGTTTAATATTCAAAACTAACTAGgtatatacatatgcatatacgCATCCATATGCATACACAGTTTGATAAGTAAGAATCACATTCACAAATACACGCACTTGAGATCAGATTCTGGAGACGTGTGGTCCCTTGTTAGGAGGCAGTGAGCATGTCTTTCAGCACGTGACACCGGGAGCTGGACaagaaatgatgaaaaaaaagcaCCGCAGAGAGCTGGCAAGCCCACCTTTATGGGCATTGAGGATCAGATAGACCCCTATAGGGTTTTGGTTTCCATACAGAGGCCTGTCATTAAGGCGGAGATGACGGGTCGGTGTTCAAGGTCCTCGCTGGAGTTTCCTCTGCTGGTTTGGTTCCCCCTGCTGGTCAAGATCCTCCAGACTTATGCAGAGGGGGGTGGGGCAAGTGGTGGATGTTGCAGTGGGGACTGTCGCACCATGCCtcctctactctgattggtcatgcTTTTGAAAGTTACGCCATGGTTAAAATGGAATGCATCAATGAGCAGAAACAAAAAGtgaaaaatcaaacaaatgagaTGAAAGTGGTTGGATAAGTGGTTAGATCCTACTAAGGGGTCGGAGAATGAGGAATGAAATCATGCAGGAGCATGTTATGATGAACATGAGAAGATGGTAGAGGCAAACATGTTAGTACCAGGTTATGACTGACTCTCTTTGGGTTTTCCATTATTGCTCAAGAACATCTTTCCTCGTTCTCCCATGCCCTCCATGCATATCCCTGGAACATCTGCTGCAATGGAATGATGTTAATGGCCATgacacaaacagcatgcaaacATGCAACCTGCCCCAACACGATCTCGCTCCTAAATTCGCCCCACCGCCCCACTAACAGACCCACAGCAGTGAGCCCCGTCCACCAAACACCACAGAACCCCAATCATCCAATCAGGAACCTGCAGCCACAGAGAGAAGAGAGAGGACAGAGTCACTGAGAGCTCCAATGACAACAAAGACTGACCAGAGACAGAGACCAAAGACAGAGGTGCTGCTCTGAAGTTACCATTCAACTTGGAATTATTATATTCTTCAGGCTGCATACTAAAAAATTACTTTGTGTCTCTATAAGGGATCTGCTAATTAGGAACAATTCAACAGCAAGAAATAAAAGGGTTTGTTTATCCCTAAATGAAAGCTCTGCCATCATTTCCTTACCTTAATGTTGTTATAAACTAATGAGACATTTGttcatctttagaacacaaatgaAGGAGTCACACTTTACCTTGAGGTTTCATTAACTAATACATTGAAGGTACTTGTACTGATACAATAAAAGCCATTGTAATTAAATTAGTGATGCATGATATTTCAGCAACAATTTCAGGAGTTGGCTGATAAATGCATATTTGTACTATAATTGTTATTGGTCCAAAAGATATAAATTGTCAGCTGATGACCTTTTGGAATAAAGTTTGTGGCCCACCATTTTTGTTTGCATTAGTGAATGATCCATACATAGGTTATTAGCTTCTAAAGTTTAACTgtgacagggtttctgcagatttcttCAAATCAATTTTAAGACGTTTTAAGAGCATTATGAATGAAATCTTAGACATAtgcagggctaaacactaaggatttctTCTAATGACCtggttacttctgtaaatagtttttgtatcaATGGATGATAATATAAATGAATGGGTTGCTTTAGCTTTCTTTCTCTGATTAGGAAATTTAATGTGAAGAATTTGCTGTGAAAAATGAATAACAGCTGTTTTGAATTGTATCTCTTTGTTCtgagatggattattggtgattgTGTGTCAGCCCAATTGGGTAGCTTTAGTTGGACAGAAAAATTTGTTCAAAAACTGatcaaaatgatttaagacctacaacagtGAATTCAAGACTTtgaggctattattattatttattttttttattcaagacaTTTTaggaccctgcagacaccctgtatCAGTATTTTTCAGTTGTAGAGATATAACTAAGAGATTAATCCAGGACTTTTGaagaaattttatatatttttttaaatatcgacATTAAATAGCAATCAGCAAATAATGTATTCAGTATTCAAATATGGATACAAATAATGCGTAATCATGCTTGCTTGAGGTGCACGAGCTATTAAGGTTTATTCTTGTAAATTCTAATTTTAGCTAGAACCAGTGTGGTTTATTATTGAGTCAATAAGGAATAGTTTAAGTTATGTTCATACTTTCAGATCAATGTctacatgaataaataatttggCTAATCATGTCTCTTCAAAAGACTTAAGAGCTtgattcatatggatttattttctGACCTCTCTACAAACATTTTGGCTGAAATGTTTTTGATCAAAAACTGAAATCAATCAGCATTCATTCGATGAAATCTGAATTTGTGTTCCCAAGAACAACATCATTAGGGTGAGTACATGACAGAAGTTTCTTTTTGGGACCGTTTAACCCTTCAACACTTCAGAGAAAGGTGGAAAAACTGGAAACCGCATGGACTGAACGTCAGAAGCACATCAAAACAAACAGAGCAAATGATTGGACTGTGGAAACGAGCTCCAAGTAGAACGTACTTTACTTTCAGCATGCATAAAAAGAAAAATCTCAACAATTAAGAGCTGATTGCAGTGTGACAGGCTCTTATTATGAGCAAATCATCTCTCAGACAACAGACATTTGAAAAAATCCCAATGTGTTTTGTTCAGGTTTGCTCtgacgataaaaaaaaaaatgattaaaaacatttattaaaaaagctCATAAAAATCTCTACAGTTCTACAGATTGATCCACTgtgcagtacg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072409 True 3198 lncRNA 0.38 2 15078036 15081665

Neighbor

gene id symbol gene type direction distance location
XLOC_036300 NA coding downstream 287315 14783214 ~ 14790721 (-)
XLOC_036299 cep350 coding downstream 468752 14559378 ~ 14609284 (-)
XLOC_036298 qsox1 coding downstream 523251 14503610 ~ 14554785 (-)
XLOC_036297 NA coding downstream 582690 14491293 ~ 14495346 (-)
XLOC_036295 lhx4 coding downstream 593437 14453933 ~ 14484599 (-)
XLOC_036302 bcar3 coding upstream 2721 15084386 ~ 15229979 (-)
XLOC_036303 NA coding upstream 169518 15251183 ~ 15251469 (-)
XLOC_036304 spata6 coding upstream 205759 15287424 ~ 15305528 (-)
XLOC_036305 agbl4 coding upstream 229624 15311289 ~ 15398760 (-)
XLOC_036306 bend5 coding upstream 421120 15502785 ~ 15520907 (-)
XLOC_036296 NA non-coding downstream 595579 14474769 ~ 14482457 (-)
XLOC_036294 BX294388.2 non-coding downstream 625598 14414353 ~ 14452438 (-)
XLOC_036286 BX248385.1 non-coding downstream 983520 14092794 ~ 14094516 (-)
XLOC_036307 FP017128.1 non-coding upstream 551067 15632732 ~ 15632847 (-)
XLOC_036309 CR931780.2 non-coding upstream 834545 15916210 ~ 15916327 (-)
XLOC_036310 CR931780.1 non-coding upstream 980507 16062172 ~ 16064410 (-)
XLOC_036311 NA non-coding upstream 1136589 16218254 ~ 16254661 (-)

Expression


Co-expression Network