LOC110500854 (LOC106608721)


Basic Information

Item Value
gene id LOC110500854
gene name LOC106608721
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 44600863 ~ 44667561 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956514.1
ATGGTTATGGGGAAGGGACACAAATTAACCCTGTCCTGTCCCCCTGCAGAGCCCCAACTGAAAGGCATTGTCACGAGACTCTACAACCGGCATGGCTTCTACCTCCAGATGCTTCCGGATGGCACCATGGACGGCACAAAGGACGAAAGCAGCTCCTTCTTGCAGTTCAACTTGATTCCTGTGGGCCTGAGGATAGTAGCCATCCAGAGCACTAAGACAGGGCTCTACATTGGGATGAACAGCGATGGATACCTCTACACTTCGGAACACTTCACCCCAGAGTGCAAGTTCAAAGAGAGTGTGTTTGAGAACTACTATGTGACGTACTCGTCCATCCTGTACCGGCAGACCCAGTCGGGCAGGGCCTGGTACATCGGCATCAACCGGGACGGGCAGGTCATGAAGGGCAACAGGGTCAAGAAGACCAAGGGGGCCGCCCACTTCCTGCCCAAACTCATCGAagTGGCTATGTACAGGGAGCCGTCGCTACATGAAGTGGTGGTGGTCGCCGAGCTGAGTTCGCCCAGGAAAATGGCCAAGGCCTCCGATTCACCTGTGCTGCAGAACGGCAAAAAAGACCCGCCCTCAAAAACCAAAACCTCCTAGCGCACAGAGAACACAGGGGCGGTCATACGGGCACTGGGCACTGGCATGGGCACCTAAAGGAACTACAGGGATGATATATAGAAGCAATGGAGCTTACTTGATGGTAGCATTAGAAGAACTCTATCTCCCATAATGCAATAGTGAAGGGTTGGGGAAATAAATGCCAATGGAACCCTTCTTTAAAGACATGGTGTGTCCCCCACCCACTGCagccccctccccttctcttacCCAACACCGCCCCTGTATGAGTCTGAGATTTCAGAGCAATAAAACTTGAGGAATGAGGCTGGGTGCGTCGTAGCATGCACTGGTCACGTCACAACTATATACACATCCACTACGGGAAATTCCCGGAAAGAAGACCGACACCTGTCATCAGCATCGTCTGTTTTTAATCTACGTCACTTCACAACGAACAATGTCTTCCTGTTTTTATTACACAGGGTCGTCACGGTTAAATGTTTCCCCCCTGTCCCACTGAGCAGCAGGGGGGGCCTATTGTTCTACATTCCCAAAGCTTCCATCCATACTAATGTAAGGTTGATCCAGGATGCGTCTGCACCCTATTttcaatatagtgcactactttgtgtGGGTTGTGGTCAAAAGtcgtgcactacaaagggaatagggtgccattttggatgcaagcCCAAAACATCCTTTTGTTCTTAGTTATCGGTTAGCAGGTCTTCTCTGTCCGTCAGCACCTTTGTGACCATAGCTATGTATCTCCTCCAtacttttttcatttttttttctttccctCGTTAACCTCAGTTTTCCACTCGGCAGCACAAGAAAAAAAActccttgttcctctctaggGCTGTTTAACAGCAGCTTCCACTGATCAAAATCTCCCCAActcttgaaagagagagagaaacctccCTGCTGCACTGAACTACACACACACGattgtgttcacacacacacacacacacacac

Function

NR:

description
PREDICTED: fibroblast growth factor 11-like

GO:

id name namespace
GO:0008083 growth factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956514.1 True 1560 mRNA 0.50 5 44600863 44667561

Neighbor

gene id symbol gene type direction distance location
LOC110500530 NA coding upstream 44152 44537944 ~ 44556711 (+)
LOC110500529 LOC106608720 coding upstream 120298 44461338 ~ 44480565 (+)
LOC110500528 tmem256 coding upstream 149331 44446186 ~ 44451532 (+)
LOC110500520 LOC106608811 coding upstream 446794 44126082 ~ 44154069 (+)
ufsp1 ufsp1 coding upstream 472810 44126674 ~ 44128053 (+)
chrnb1 LOC106608722 coding downstream 12104 44679665 ~ 44703721 (+)
LOC110500532 LOC106608724 coding downstream 59639 44727200 ~ 44746630 (+)
LOC110500535 LOC106608728 coding downstream 114658 44782219 ~ 44788930 (+)
LOC118942934 NA coding downstream 123038 44789670 ~ 44796290 (+)
LOC110500538 LOC106608727 coding downstream 137237 44804798 ~ 44807754 (+)
G1741670 NA non-coding upstream 112105 44488530 ~ 44488758 (+)
G1741666 NA non-coding upstream 125234 44475403 ~ 44475629 (+)
G1741653 NA non-coding upstream 141970 44458606 ~ 44458893 (+)
G1741587 NA non-coding upstream 195435 44405226 ~ 44405428 (+)
G1741712 NA non-coding downstream 6446 44674007 ~ 44675297 (+)
G1741965 NA non-coding downstream 51978 44719539 ~ 44719756 (+)
G1741989 NA non-coding downstream 91918 44759479 ~ 44759698 (+)
G1741992 NA non-coding downstream 95776 44763337 ~ 44763631 (+)
G1741994 NA non-coding downstream 98127 44765688 ~ 44765905 (+)
G1740752 NA other upstream 387633 44212786 ~ 44213230 (+)
G1740453 NA other upstream 1074137 43524736 ~ 43526726 (+)
G1740412 LOC106608825 other upstream 1130538 43469818 ~ 43470325 (+)
fcer1g LOC106608748 other downstream 776966 45444361 ~ 45449712 (+)
LOC110500870 LOC106608752 other downstream 817711 45485247 ~ 45517233 (+)
si:dkey-38p12.3 LOC106608755 other downstream 881556 45544516 ~ 45565742 (+)
G1743043 NA other downstream 971735 45639296 ~ 45639742 (+)
G1743077 NA other downstream 1039581 45707142 ~ 45709950 (+)

Expression


Co-expression Network