il13ra1 (i13r2)


Basic Information

Item Value
gene id il13ra1
gene name i13r2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45359504 ~ 45368212 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577965.2
CGCCCTATTTGCCAATCCGATGCGCGACAGAAGCCCTCGCTGTCACACGAAATGGAATCATAGACTGTATGAATGTATTGATAACTCGCTCGCGGGTGTAAATCCGGTGTTTGCTTTTGTTCATATTGATCTGGACGTGAGGCACTTCTATTTGTTCGCTCTGTTTGGGAGACAACTGCTCGACAATTCTTGTCTTACCTTTGGAATTCCGGGCGATTTTGAGGAGGCGCAGTCTGCCAGAAATTACGCACCGGACAACATGATTTTGAAACATTTGGATTTTCTCTTGGTTCTACGATACTTTATTCATTTGGTCGCGTTAGAGGTTGCAGCTGAGCAAGCTCTCCCTGAGCCGCTCAACCTGTCATTGACGTGGGAGTCTGAATTCCGTATAAAGCTGTCGTGGAACGCACCAAATAATTTAGATGCATCATGCAAGGTGAACTACATGGTCACTACAACGATCGGAGAGGAGAACCCCATATTAATTTCAACTTTCAGCTTGTATAAAGAGTACATTGTCACTACGAATGATGCAGTGAATTACACAGTGAAAACAAACCCCAACGAATGTACAGGCAGAACCATAAGCAAACCTGTCAGCATCTGTAAACCTAAACCCCCAGAGTTGGTGAAGAACTTCCAGTGTTCCCTCTACTCCTCTAAGGCCATGAACTGCAGCTGGCTCCCAGCCAATCAGGCCTCAGACCTCCAGCTCTACTATGGGTACCTTGGTCCCTCCCACATAGCAGCATGCagtgagtaccagtacagagatgGTCAGAGGACAGGATGTCACCTGAGAGGATCCTTCCTTCAATATGACGTCTACTTCAAGGTCAATGGGACTCTCGATGGCTTATCTGTACAGAATAACTTCCTGGTGCTTCCTAAATATCATGTCAAGGCCCCGGCTCCTAAGGTGAAGATAACAGAGACAGGAAGGAATCTCATCCTGAGCTGGGACCCTCCGGACATAGGCGCTGGCCACTGCTGGAGTTACATCTTTAACTACAGCAAGTGTCAACTGCTCGTGGATAGTAAAGAAATACAATTGAAACATGTGAAGGTTTCATATGACCAGAGATGCCAGTACAGAGTCCAGCTTAAAGCAGTCTATACGAAATGGTGTGGGGAGGGAGGCAGCGACTGGAGCGAAGAGGAAATCTATGGTGTGGATGATTGGTCGATGACTGTGTTTGCTGTCGTCATTCCAGCTGTAGTCTTCTTATTCCTCATCCTTTTAATTAGTTGTTTTATGAAGCACAGAGAGAAGGTTTTCCCCACGATTCCACATCCCTCACTGGTTTTCAAGGACATGCTGAACAGCAATAAGGGACTGAAGAGCTCCATAGGCAATCTCTATGTCCcggatgaggaggaggtggaatgTAAGATCAGCCTAGAGAAAGACTATACTCTTCCCATGATGCAGCCTGATCACTGAGAGACTACACACTGACCCAGTAGTGATTACGACTGTACAGACAGATACAGCAACAACCTGACCCGGTATGACCTGGGAGCCAAGTGACTTCAGTGTCATTGACCGGCCCTCAAAGTAAGCTATCTTAAGGTGGACCCTAACTGTACTGCTGAAGAGTGTCAGGAGTTGGAGCTCCACAGTCGATGGACGACCTTAACGAGTTGGATACAGACTGAGAGTAtgtggactatggactatggagaCGCCTTTTCTTTTGTTTGCCCTGGAACTGTCAGGACTTATCGACTCACTGACTCCTGTATTGttctggattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaggcagatACTAAGAACTGTTCTCATGTACCCCTTGCAACCCAAGGCTCGGGGTCTTAGGTCAAATGTCAGAGGTTATCAGAAAGCCAGTGCAGGAAACGAGGGGCTGGACTCCTAAATCTCACTCCCCGACCAAATAGGACATTGGTGGGCAGTGCCCGAAGAGATGTGCAGGCAGCACCACAGTCTTTATCTGACTGATCAACCCGGTTGATCATGTAATTATTTAGGGGACAAAGAGGTACTTGAAGCTGTGAACCTCTGTGAAATGAGTGCACTACCTGTGCCATAAAAGGCCAGACCTCTAGGGAGGGACTTTAGGGCATTGACATACAGgtagttgtgtcccaaatggctccctattcactaCATGTATGGTGtgttacttttgtccagggcccatagggctctggtcaaaagtagtgcactatgtagggaacagagtgccatttgggatgccgtaTGCCTATCAAGGGCTATATGCTGCTAATGTGAGCTAAATTGTTGTGTCTCTATTGTTATCAACCTGAATTGCTATGTGTAAATAGGTTGTGCAGGTGTATCTATAGTATGTACAAATGTTggtgaaatatatatttagaGTTTTGTGTGTTAAGGAAATGTTTTGTGCAACacgtatttttatttatttatttttttaaatttcacatgctgtctTATGGAACCTTATTCTTCTGCATGAATGATTAATTGAtatcaccacacacactcactcattgaGTATCATTCACATCACACCTCCATACATGCAGAGACTCTTCCTTGATAAGATCGCCAAGTCCTTTTTAACAACCTGAAAGGAGAAACGTACTTTGTAGAGGACCTGCTGAACAGCTTAAACCTGTTATCTGGTCTGTTCCGAACTAGAGATAAGTGTAACATGCTCACAGACGAACCAATGGCCATGTCAAGCAAGGCCTCGTGTACCTGCTAATCTATGATGAGAATCAATCCAGAGTGTAGGTGTTGAGAGAATAAATCCATCAACAAATAA
>TU1995205
ACTACTAAACTCTCAAGTATGCAAATATTGTTGATATTACCAATACTCTCATTTATCTaatgttatactgtatgtctgaTTCTCTTCAGTCAAGGCCCCGGCTCCTAAGGTGAAGATAACAGAGACAGGAAGGAATCTCATCCTGAGCTGGGACCCTCCGGACATAGGCGCTGGCCACTGCTGGAGTTACATCTTTAACTACAGCAAGTGTCAACTGCTCGTGGATAGTAAAGAAATACAATTGAAACATGTGAAGGTTTCATATGACCAGAGATGCCAGTACAGAGTCCAGCTTAAAGCAGTCTATACGAAATGGTGTGGGGAGGGAGGCAGCGACTGGAGCGAAGAGGAAATCTATGGTGTGGATGATTGGTCGATGACTGTGTTTGCTGTCGTCATTCCAGCTGTAGTCTTCTTATTCCTCATCCTTTTAATTAGTTGTTTTATGAAGCACAGAGAGAAGGTTTTCCCCACGATTCCACATCCCTCACTGGTTTTCAAGGACATGCTGAACAGCAATAAGGGACTGAAGAGCTCCATAGGCAATCTCTATGTCCcggatgaggaggaggtggaatgTAAGATCAGCCTAGAGAAAGACTATACTCTTCCCATGATGCAGCCTGATCACTGAGAGACTACACACTGACCCAGTAGTGATTACGACTGTACAGACAGATACAGCAACAACCTGACCCGGTATGACCTGGGAGCCAAGTGACTTCAGTGTCATTGACCGGCCCTCAAAGTAAGCTATCTTAAGGTGGACCCTAACTGTACTGCTGAAGAGTGTCAGGAGTTGGAGCTCCACAGTCGATGGACGACCTTAACGAGTTGGATACAGACTGAGAGTAtgtggactatggactatggagaCGCCTTTTCTTTTGTTTGCCCTGGAACTGTCAGGACTTATCGACTCACTGACTCCTGTATTGttctggattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaggcagatACTAAGAACTGTTCTCATGTACCCCTTGCAACCCAAGGCTCGGGGTCTTAGGTCAAATGTCAGAGGTTATCAGAAAGCCAGTGCAGGAAACGAGGGGCTGGACTCCTAAATCTCACTCCCCGACCAAATAGGACATTGGTGGGCAGTGCCCGAAGAGATGTGCAGGCAGCACCACAGTCTTTATCTGACTGATCAACCCGGTTGATCATGTAATTATTTAGGGGACAAAGAGGTACTTGAAGCTGTGAACCTCTGTGAAATGAGTGCACTACCTGTGCCATAAAAGGCCAGACCTCTAGGGAGGGACTTTAGGGCATTGACATACAGgtagttgtgtcccaaatggctccctattcactaCATGTATGGTGtgttacttttgtccagggcccatagggctctggtcaaaagtagtgcactatgtagggaacagagtgccatttgggatgccgtaTGCCTATCAAGGGCTATATGCTGCTAATGTGAGCTAAATTGTTGTGTCTCTATTGTTATCAACCTGAATTGCTATGTGTAAATAGGTTGTGCAGGTGTATCTATAGTATGTACAAATGTTggtgaaatatatatttagaGTTTTGTGTGTTAAGGAAATGTTTTGTGCAACacgtatttttatttatttatttttttaaatttcacatgctgtctTATGGAACCTTATTCTTCTGCATGAATGATTAATTGAtatcaccacacacactcactcattgaGTATCATTCACATCACACCTCCATACATGCAGAGACTCTTCCTTGATAAGATCGCCAAGTCCTTTTTAACAACCTGAAAGGAGAAACGTACTTTGTAGAGGACCTGCTGAACAGCTTAAACCTGTTATCTGGTCTGTTCCGAACTAGAGATAAGTGTAACATGCTCACAGACGAACCAATGGCCATGTCAAGCAAGGCCTCGTGTACCTGCTAATCTATGATGAGAATCAATCCAGAGTGTAGGTGTTGAGAGAATAAATCCATCAACAAATAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577965.2 False 2808 mRNA 0.45 10 45359504 45368212
TU1995205 True 1995 lncRNA 0.44 5 45364584 45368212

Neighbor

gene id symbol gene type direction distance location
dock11 dock11 coding upstream 212 45247575 ~ 45359292 (+)
LOC118942935 LOC106608740 coding upstream 285068 45073787 ~ 45074436 (+)
LOC110500862 LOC106608740 coding upstream 293059 45053322 ~ 45066445 (+)
LOC110500859 LOC106608737 coding upstream 340735 45015116 ~ 45018769 (+)
LOC110500539 LOC106608730 coding upstream 490826 44863195 ~ 44868678 (+)
trnar-ucu-9 NA coding downstream 9797 45378009 ~ 45378082 (+)
kirrel1a LOC106608745 coding downstream 11098 45379310 ~ 45419173 (+)
ndufs2 ndufs2 coding downstream 64368 45432580 ~ 45444197 (+)
fcer1g LOC106608748 coding downstream 76149 45444361 ~ 45449712 (+)
nectin4a LOC106608750 coding downstream 87447 45455659 ~ 45474914 (+)
G1742308 NA non-coding upstream 95890 45263230 ~ 45263614 (+)
G1742298 NA non-coding upstream 115328 45230536 ~ 45244176 (+)
G1742167 NA non-coding upstream 313859 45042866 ~ 45045645 (+)
G1742156 NA non-coding upstream 330856 45026746 ~ 45028648 (+)
G1742029 NA non-coding upstream 519957 44837922 ~ 44839547 (+)
G1742371 NA non-coding downstream 54085 45422297 ~ 45426947 (+)
G1742379 NA non-coding downstream 112263 45480475 ~ 45521688 (+)
G1742416 NA non-coding downstream 153915 45522127 ~ 45522440 (+)
G1742381 NA non-coding downstream 157165 45525377 ~ 45525723 (+)
G1742383 NA non-coding downstream 158140 45526352 ~ 45526612 (+)
LOC110500529 LOC106608720 other upstream 886940 44461338 ~ 44480565 (+)
LOC110500528 tmem256 other upstream 907972 44446186 ~ 44451532 (+)
G1740752 NA other upstream 1146274 44212786 ~ 44213230 (+)
G1740453 NA other upstream 1832778 43524736 ~ 43526726 (+)
G1740412 LOC106608825 other upstream 1889179 43469818 ~ 43470325 (+)
LOC110500870 LOC106608752 other downstream 117060 45485247 ~ 45517233 (+)
si:dkey-38p12.3 LOC106608755 other downstream 180905 45544516 ~ 45565742 (+)
G1743043 NA other downstream 271084 45639296 ~ 45639742 (+)
G1743077 NA other downstream 338930 45707142 ~ 45709950 (+)

Expression


Co-expression Network