kirrel1a (LOC106608745)


Basic Information

Item Value
gene id kirrel1a
gene name LOC106608745
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45379310 ~ 45419173 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577966.2
aaggactGCGCCGCTAATGAGAAAACGGACCGTCGCCGAGCACGCAAGAGCAGACAgcaaaaaggagagaggaggaaaaaacGGAGAAATGATCTAAACCGTAAAAAAGAGAGTAGAAAGGGGAGGTGGATAACGACGAAAATCGTCACATATATTCACTGGAAGGATTACAATTGCCCGATAGTGGTGAATAAAATCCAACGGGGTTTTTTGATGCTGTCCTCACGGAGAATTGAGCTAACGGGCTTGCTGGTCTTCTGAACGATGCATAGGCTTCTGCTCCTGAGTTTGGCGTTGAGTTTTCACCGTGTGTGGACAGCGCGTTTCTCCCAGGAGCCAGCGGACCAGTCGGTTGTGCGGGGCCAGAGGGTGATTCTGTCCTGTGTTGTGTTTAACTACTCAGGCATTGTGCAGTGGACCAAGGATGGACTGGCCCTGGGCATCGGAGAGGACCTCAGGGcttggCCGAGGTACCGTGTGATGAGGGTGCAGGAGCTGGGCCAGTATAACCTGGAGATCATCTCAGCTGAGCTGTCTGATGACTCCCTGTACGAGTGTCAGGCCCCAGACGCTGCGCTACGTTCTAGAAGAGCCAAACTCACTGTCCTCATCCCTCCAGATGACCCAGTGATCGACGGGGCCCCTGAGGTGCTGTTGAATGCAGGCGACCACTATAACCTGAGTTGTGTGTCCCGTGGGGCCAAGCCCCCTGCCATGATAGAGTGGCAAAAAGACGGGCTCCCCGTAGACGGAGCAGTCAGCACCACCGAGGTGCTCCCAGACAGGAAGAGGGTGACGACCCACAGCTTCCTGCCCATCCACCCAGTGGACACAGACACAGGGAGGAACTACAGCTGTGTGGCCAGCAACCTGGCTATCCCCACTGGCAAACACACCACCGTCACCCTCAACGTACACCACCCCCCCATGGTGACCCTGTCCATCGAGCCCCGCTCCGTCTTAGAGGGGGACAGAGTCACCTTCACCTGCGCCGCCTCCGCCAACCCTCCTATCATGGGAtacatGTGGGCTAAGGGTGGAGTGATCTTGCAGGGGGCCAGAGAGAGTGTGTTCACCACCAAGGCGGACCACTCCTTCTTCACGGAGCCTGTGTCCTGCTCAGTGTTCAATGCTGTGGGTAAAACCAACGTCAGCATCCTGGTCGATGTACACTttgGTCCTATCCTGGTAGTGGAGCCTAGGCCAGTGACCGTGGACATAGACTCTGATGTCACTCTGAACTGCAAATGGGCTGGcaaccctcctctcaccctcaccTGGACGAAGAAGGGCTCCAACATGGTCCTTAGTAATAACAACCAGCTGTTCCTGAAGTCAGTGAGCCAGGCGGACGCTGGGCAGTATGTGTGTAAGGCCATCGTCCCCAGGATcggagtgggagagacagaggtcaCTCTCACTGTCAACGgTCCCCCCATCATCTCCAGTGAGCCTGTTCAGTATgcagtgaggggggagagaggagaggtcaagTGCTACATCGCCAGCACACCTCCACCGGACAAGATTGTGTGGGCGTGGAAGGAGAACGtgtgggagaaggagaaggggactCTGTTGGAGAGGTACACGGTGGAGCAGAGTAAACCTCTGTCTGAGGGAGGGGCTGTGCTCTCCACCCTCACCATCAACAACGTCATGGAGGCTGACTTCCTGTCCACCTACAACTGTACCGCCTGGAACTCCTTCGGACCTGGGACCATGATCATCACCCTGGAAGAGACCGAGGAGGTACCAGTGGGTATAATAGCAGGAGGGACTGTTGGCTGCACCATCCTGCTGTTCCTGTGTTTACTAGTCCTGGTGCTCATCTTCTACCGACAGCGCAAAGGCAGTCGTCGTGGGGTCACGCTGGGTAAACCAGACATCAAGGTAGAGACAATAAACAAGGAGACCCACAGTCTGGAGGAGGACTCCGGCAGCGTTTCCACAGCATCACGCATGGTCAAGGCCATGTACTCGATTCTGCCCTCTTCtgtgtccttctctccctcctctcagcccTTTAAAGACGATATAGAACTCAAGCAGGACCTGCGTAGCGATACGCTAGACACTCGCCAGGAGTACGACCTGAAGGACCCCACCAACGGCTACTACAACGTGCGAGCCTCCACCCTTGACGAGGGTCGCCCTGCCTCCCGCTCCATGCACTACTCCGACTACCGGCCCTCCAACACCCCAGGGGGAGCTGCTTCTGTCAGCAGCAGTGCTGGAGGATCAGGGGCCACAGCCAGCGGAGGAGGCCCTCCAGGCCCAGGGACCCTCTCCACCCCCGGTCGCCCCAGTTGCTACGACCCCCGGCCCCCCTCCAGACTCTCCCACAACAGCTACGCCCAGTTCAACACCTTCACCCGGGCTGGGCAGAGCCAGCAGCCCCCTCCCAACCCCCCGCCGCAGACCAGCGACTTCCCTGGGGACTGCAGCCTGTTGGACTCCCCTCAGCTGGCCTATGACAACTACGGCTATCCCTCTCACCCCTATACCCCCTACCGCATGGGCTTTGCCCCGCCCAGTCTGGCTCCATTGGAAACCGGGCCTTCCTATGAGATGTACGGAGTGGGGTCGGGGGTGGGGCCTGTGCCAGGGGTGGGGCCTGGTGTGGGGCTGGGGGCGACTCCGTCAGGGTCAGAGACTGGACTGGGGAAGTATGGAAGCTCCACCCGCTTCTCCTATACCTCGCAGCAGTCTGACTACGGccacagaggacacacacagaggatGCAGACACATGTGTGAGATGGATAGCTGACATACAGTGCACAGTCACATATGCGGTGAGGGTGCATTCTcatactacacactgtcactcagacgCACACAGAGGCCGCACACACGCATTCACATTCTCAAACATAcgcacatatactgtacatgtgagcacacacacgcagatatacacacagacacacgcagacacacacacacacagaggagttaGAATTTCCCCACGAGACAGGGagggtgtgagaaagagagagtccagaTCAGTGGATAACGAGTGAATTCCTGGTAATCTAGAATTCCCACAATCCCAGTGTTCAGATCTTCACTCTGAAAGAGCGGAAAGCAAAAGTCCAATCAAGACCAGAGAAGACGGGACTAGAGAGAACAAAAGATCTTTAGATGTTAATTATCGAAATAAATAGCATGTGTGCTATGAATTTAGATTGTTGTGAATGACGAGAGGGAGCGCTACAGGCAATTTATTCCATATTCGATTGCCAAATATTACAGTAAGGCATATCATGGAGAAATTGACCGTCAAGTATGGTACTCATTCGAAGGGCGGGAGAAACCTCAACCAGTGGAGGGTCATGACTGGCCGCCATTTTGTTTTAGCTGGTTGTTGTTTTATACAGTGATTTTAGAGCACATATATATCCCACATTGCTCCACTTCATTGGCGCCATTGGTGCTGGTTAGTGGGGTCATCGTACGTTTTGCACTGCATTACAAACAGTATTCATTGCTTAGAAATCCATCATCTACATATATCTGTATTATATGAGTCTGTTTTTATTTGCACACCAACAAACTAGAGCTTTCTATtctattttttaacattttacaGAATTATTTTGGTCATATTTCTGTGAAGGAAGTGTCTGtggaccaagatgttcaaacttgAGAGTGTTTAGTCTTTGTTTGGGTGATATTCACCTCAACAAACAAAGAGAAACACAAAGAAGTATTTGAGTACCTGTTTTTGTCAGCCATGATGACTGGCAAGATTCAGGAAGGGGAGGGTATACAAGAACCTTTTTTCCAAGTGTCCATGTTTGCTCTTTATTTGATGTAAATCTGGGGTTACAAGCATTTAAATGCAGTAGATACCATGCAGGAAGTCCTTATATGGGAAGGTGTTCAGGCCTTGAGGCAGTCCGGGCGTATGGAACTACAGTATAAGCCTGCTAGCCTGGCATTCAAACTGAATTTTCTACGTTTCACCATTTATATGAACTACATATTTTATATGGTGAAACATAGCGGATTCCGCTTGGATCCAGGCTATAAACCTTAGTTTGGTGCCCCCTGCTGAAATAGAGAGAGGTGACGTGGTAGCCTGGTTGCAGATCTGGTTATGCTGTCTTGCCCACTCCTACGGTCATTGTCACGCTTGCGAACAAACAgcacctgggaccaggctagtgagaTGCTGTGTATAAGAGTGGCCTTAGGGAACATGCGGTAATGCTTTCATCATTCATTCCTCCTCACACACAATCAGCCACGAGGGCCAGAGGAGAATGTGTGTGGAGAGGTTCAATGAAGGTTTGTCTACACTATTGATATACGGATAGTGGAGTGCTATTGTGCGAATGTTTGTgcgtgaaagagagagtgtgtgtatgcacaTCTATTTGTACAGTGtttgtataggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaatgcataGACATACAGTTCTCTACCTGCGTGTGAATGTGACTATTGTATGCAtgtcagtgtgtacagtatgtgtgtgtgcatgtctgtatgtgttcatgtgtgtgagtGCGTTTCAGTAATATGTCCATATCATTTCTCTTCACGATCCTGTTCCAATACTTTTATACCTCTGGTAGGACTGTATCCTGTATTATTGTGTCTTTGAATTTAGAAATACAATGTTTATCTTATTGTACTGTTCTACGTAGCAGAAAAAAAACTGTTCAAAAGATGTACAACAGAAAGTGATCAAATTTTCATTTTTTAATTTCATTATCTccaatatttttaaaaaatggtatGTAATTATTTTTCCACAGTATAACAGAAATAAAAAGCActgttttttataaaataaatcA
>XM_021577967.2
aaggactGCGCCGCTAATGAGAAAACGGACCGTCGCCGAGCACGCAAGAGCAGACAgcaaaaaggagagaggaggaaaaaacGGAGAAATGATCTAAACCGTAAAAAAGAGAGTAGAAAGGGGAGGTGGATAACGACGAAAATCGTCACATATATTCACTGGAAGGATTACAATTGCCCGATAGTGGTGAATAAAATCCAACGGGGTTTTTTGATGCTGTCCTCACGGAGAATTGAGCTAACGGGCTTGCTGGTCTTCTGAACGATGCATAGGCTTCTGCTCCTGAGTTTGGCGTTGAGTTTTCACCGTGTGTGGACAGCGCGTTTCTCCCAGGAGCCAGCGGACCAGTCGGTTGTGCGGGGCCAGAGGGTGATTCTGTCCTGTGTTGTGTTTAACTACTCAGGCATTGTGCAGTGGACCAAGGATGGACTGGCCCTGGGCATCGGAGAGGACCTCAGGGcttggCCGAGGTACCGTGTGATGAGGGTGCAGGAGCTGGGCCAGTATAACCTGGAGATCATCTCAGCTGAGCTGTCTGATGACTCCCTGTACGAGTGTCAGGCCCCAGACGCTGCGCTACGTTCTAGAAGAGCCAAACTCACTGTCCTCATCCCTCCAGATGACCCAGTGATCGACGGGGCCCCTGAGGTGCTGTTGAATGCAGGCGACCACTATAACCTGAGTTGTGTGTCCCGTGGGGCCAAGCCCCCTGCCATGATAGAGTGGCAAAAAGACGGGCTCCCCGTAGACGGAGCAGTCAGCACCACCGAGGTGCTCCCAGACAGGAAGAGGGTGACGACCCACAGCTTCCTGCCCATCCACCCAGTGGACACAGACACAGGGAGGAACTACAGCTGTGTGGCCAGCAACCTGGCTATCCCCACTGGCAAACACACCACCGTCACCCTCAACGTACACCACCCCCCCATGGTGACCCTGTCCATCGAGCCCCGCTCCGTCTTAGAGGGGGACAGAGTCACCTTCACCTGCGCCGCCTCCGCCAACCCTCCTATCATGGGAtacatGTGGGCTAAGGGTGGAGTGATCTTGCAGGGGGCCAGAGAGAGTGTGTTCACCACCAAGGCGGACCACTCCTTCTTCACGGAGCCTGTGTCCTGCTCAGTGTTCAATGCTGTGGGTAAAACCAACGTCAGCATCCTGGTCGATGTACACTttgGTCCTATCCTGGTAGTGGAGCCTAGGCCAGTGACCGTGGACATAGACTCTGATGTCACTCTGAACTGCAAATGGGCTGGcaaccctcctctcaccctcaccTGGACGAAGAAGGGCTCCAACATGGTCCTTAGTAATAACAACCAGCTGTTCCTGAAGTCAGTGAGCCAGGCGGACGCTGGGCAGTATGTGTGTAAGGCCATCGTCCCCAGGATcggagtgggagagacagaggtcaCTCTCACTGTCAACGgTCCCCCCATCATCTCCAGTGAGCCTGTTCAGTATgcagtgaggggggagagaggagaggtcaagTGCTACATCGCCAGCACACCTCCACCGGACAAGATTGTGTGGGCGTGGAAGGAGAACGtgtgggagaaggagaaggggactCTGTTGGAGAGGTACACGGTGGAGCAGAGTAAACCTCTGTCTGAGGGAGGGGCTGTGCTCTCCACCCTCACCATCAACAACGTCATGGAGGCTGACTTCCTGTCCACCTACAACTGTACCGCCTGGAACTCCTTCGGACCTGGGACCATGATCATCACCCTGGAAGAGACCGAGGAGGTACCAGTGGGTATAATAGCAGGAGGGACTGTTGGCTGCACCATCCTGCTGTTCCTGTGTTTACTAGTCCTGGTGCTCATCTTCTACCGACAGCGCAAAGGCAGTCGTCGTGGGGTCACGCTGGGTAAACCAGACATCAAGGTAGAGACAATAAACAAGGAGACCCACAGTCTGGAGGAGGACTCCGGCAGCGTTTCCACAGCATCACGCATGGTCAAGGCCATGTACTCGcccTTTAAAGACGATATAGAACTCAAGCAGGACCTGCGTAGCGATACGCTAGACACTCGCCAGGAGTACGACCTGAAGGACCCCACCAACGGCTACTACAACGTGCGAGCCTCCACCCTTGACGAGGGTCGCCCTGCCTCCCGCTCCATGCACTACTCCGACTACCGGCCCTCCAACACCCCAGGGGGAGCTGCTTCTGTCAGCAGCAGTGCTGGAGGATCAGGGGCCACAGCCAGCGGAGGAGGCCCTCCAGGCCCAGGGACCCTCTCCACCCCCGGTCGCCCCAGTTGCTACGACCCCCGGCCCCCCTCCAGACTCTCCCACAACAGCTACGCCCAGTTCAACACCTTCACCCGGGCTGGGCAGAGCCAGCAGCCCCCTCCCAACCCCCCGCCGCAGACCAGCGACTTCCCTGGGGACTGCAGCCTGTTGGACTCCCCTCAGCTGGCCTATGACAACTACGGCTATCCCTCTCACCCCTATACCCCCTACCGCATGGGCTTTGCCCCGCCCAGTCTGGCTCCATTGGAAACCGGGCCTTCCTATGAGATGTACGGAGTGGGGTCGGGGGTGGGGCCTGTGCCAGGGGTGGGGCCTGGTGTGGGGCTGGGGGCGACTCCGTCAGGGTCAGAGACTGGACTGGGGAAGTATGGAAGCTCCACCCGCTTCTCCTATACCTCGCAGCAGTCTGACTACGGccacagaggacacacacagaggatGCAGACACATGTGTGAGATGGATAGCTGACATACAGTGCACAGTCACATATGCGGTGAGGGTGCATTCTcatactacacactgtcactcagacgCACACAGAGGCCGCACACACGCATTCACATTCTCAAACATAcgcacatatactgtacatgtgagcacacacacgcagatatacacacagacacacgcagacacacacacacacagaggagttaGAATTTCCCCACGAGACAGGGagggtgtgagaaagagagagtccagaTCAGTGGATAACGAGTGAATTCCTGGTAATCTAGAATTCCCACAATCCCAGTGTTCAGATCTTCACTCTGAAAGAGCGGAAAGCAAAAGTCCAATCAAGACCAGAGAAGACGGGACTAGAGAGAACAAAAGATCTTTAGATGTTAATTATCGAAATAAATAGCATGTGTGCTATGAATTTAGATTGTTGTGAATGACGAGAGGGAGCGCTACAGGCAATTTATTCCATATTCGATTGCCAAATATTACAGTAAGGCATATCATGGAGAAATTGACCGTCAAGTATGGTACTCATTCGAAGGGCGGGAGAAACCTCAACCAGTGGAGGGTCATGACTGGCCGCCATTTTGTTTTAGCTGGTTGTTGTTTTATACAGTGATTTTAGAGCACATATATATCCCACATTGCTCCACTTCATTGGCGCCATTGGTGCTGGTTAGTGGGGTCATCGTACGTTTTGCACTGCATTACAAACAGTATTCATTGCTTAGAAATCCATCATCTACATATATCTGTATTATATGAGTCTGTTTTTATTTGCACACCAACAAACTAGAGCTTTCTATtctattttttaacattttacaGAATTATTTTGGTCATATTTCTGTGAAGGAAGTGTCTGtggaccaagatgttcaaacttgAGAGTGTTTAGTCTTTGTTTGGGTGATATTCACCTCAACAAACAAAGAGAAACACAAAGAAGTATTTGAGTACCTGTTTTTGTCAGCCATGATGACTGGCAAGATTCAGGAAGGGGAGGGTATACAAGAACCTTTTTTCCAAGTGTCCATGTTTGCTCTTTATTTGATGTAAATCTGGGGTTACAAGCATTTAAATGCAGTAGATACCATGCAGGAAGTCCTTATATGGGAAGGTGTTCAGGCCTTGAGGCAGTCCGGGCGTATGGAACTACAGTATAAGCCTGCTAGCCTGGCATTCAAACTGAATTTTCTACGTTTCACCATTTATATGAACTACATATTTTATATGGTGAAACATAGCGGATTCCGCTTGGATCCAGGCTATAAACCTTAGTTTGGTGCCCCCTGCTGAAATAGAGAGAGGTGACGTGGTAGCCTGGTTGCAGATCTGGTTATGCTGTCTTGCCCACTCCTACGGTCATTGTCACGCTTGCGAACAAACAgcacctgggaccaggctagtgagaTGCTGTGTATAAGAGTGGCCTTAGGGAACATGCGGTAATGCTTTCATCATTCATTCCTCCTCACACACAATCAGCCACGAGGGCCAGAGGAGAATGTGTGTGGAGAGGTTCAATGAAGGTTTGTCTACACTATTGATATACGGATAGTGGAGTGCTATTGTGCGAATGTTTGTgcgtgaaagagagagtgtgtgtatgcacaTCTATTTGTACAGTGtttgtataggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaatgcataGACATACAGTTCTCTACCTGCGTGTGAATGTGACTATTGTATGCAtgtcagtgtgtacagtatgtgtgtgtgcatgtctgtatgtgttcatgtgtgtgagtGCGTTTCAGTAATATGTCCATATCATTTCTCTTCACGATCCTGTTCCAATACTTTTATACCTCTGGTAGGACTGTATCCTGTATTATTGTGTCTTTGAATTTAGAAATACAATGTTTATCTTATTGTACTGTTCTACGTAGCAGAAAAAAAACTGTTCAAAAGATGTACAACAGAAAGTGATCAAATTTTCATTTTTTAATTTCATTATCTccaatatttttaaaaaatggtatGTAATTATTTTTCCACAGTATAACAGAAATAAAAAGCActgttttttataaaataaatcA

Function

NR:

description
PREDICTED: kin of IRRE-like protein 1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577966.2 False 4922 mRNA 0.51 15 45379310 45419173
XM_021577967.2 True 4883 mRNA 0.50 15 45379310 45419173

Neighbor

gene id symbol gene type direction distance location
trnar-ucu-9 NA coding upstream 1228 45378009 ~ 45378082 (+)
il13ra1 i13r2 coding upstream 11098 45359504 ~ 45368212 (+)
dock11 dock11 coding upstream 20018 45247575 ~ 45359292 (+)
LOC118942935 LOC106608740 coding upstream 304874 45073787 ~ 45074436 (+)
LOC110500862 LOC106608740 coding upstream 312865 45053322 ~ 45066445 (+)
ndufs2 ndufs2 coding downstream 13407 45432580 ~ 45444197 (+)
fcer1g LOC106608748 coding downstream 25188 45444361 ~ 45449712 (+)
nectin4a LOC106608750 coding downstream 36486 45455659 ~ 45474914 (+)
LOC110500870 LOC106608752 coding downstream 66074 45485247 ~ 45517233 (+)
si:dkey-38p12.3 LOC106608755 coding downstream 125343 45544516 ~ 45565742 (+)
G1742308 NA non-coding upstream 115696 45263230 ~ 45263614 (+)
G1742298 NA non-coding upstream 135134 45230536 ~ 45244176 (+)
G1742167 NA non-coding upstream 333665 45042866 ~ 45045645 (+)
G1742156 NA non-coding upstream 350662 45026746 ~ 45028648 (+)
G1742371 NA non-coding downstream 3124 45422297 ~ 45426947 (+)
G1742379 NA non-coding downstream 61302 45480475 ~ 45521688 (+)
G1742416 NA non-coding downstream 102954 45522127 ~ 45522440 (+)
G1742381 NA non-coding downstream 106204 45525377 ~ 45525723 (+)
G1742383 NA non-coding downstream 107179 45526352 ~ 45526612 (+)
LOC110500529 LOC106608720 other upstream 906746 44461338 ~ 44480565 (+)
LOC110500528 tmem256 other upstream 927778 44446186 ~ 44451532 (+)
G1740752 NA other upstream 1166080 44212786 ~ 44213230 (+)
G1740453 NA other upstream 1852584 43524736 ~ 43526726 (+)
G1740412 LOC106608825 other upstream 1908985 43469818 ~ 43470325 (+)
G1743043 NA other downstream 220123 45639296 ~ 45639742 (+)
G1743077 NA other downstream 287969 45707142 ~ 45709950 (+)

Expression


Co-expression Network