LOC110500572 (LOC106608759)


Basic Information

Item Value
gene id LOC110500572
gene name LOC106608759
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45677661 ~ 45686049 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577985.2
TATTAAATTATTAACAGCCTAGACTTTACGGTTGTGATGTAAAAGCGAGTTTATCACGTTCCTGCACTTTTCCGGATTACTGTACCTTGGTCtgacctctgtctgtcttttaatATTCTAAATCCTTGATATATATTTAATAATATGGATTTCTCCATTCGTGCTTCTACACTAGAAGACTGCAAAGATATCGCGCGGATGATCTTGGAACTGGCTGAATACGAGAAGGTCTTGGACCAAGTGAAAGTTACACAGAAAGATTTGGAGCAGGATGGGTTCATTAAAAACCCATTCTTTCATGGTATCGTCGCAGAAGTACCCGAACAACACAGGACcaaagagggCCATGCCAAGGTGGGCTACGCACTTTACTTCTATACCTACAGCTCGTGGAAAGGACGGGCCCTCTACATGGAGGACCTGTATGTGATGCCTGAGTTCAGAGGTAAAGGTATCGGGAAGGCACTGATGAGCAAAGTAGCTCAGTTGGGCCTGGCCGCCGGCTGCACCCAGCTCAACTTCGCCGTGCTGGACTGGAACAAACCGTCTCTGGATTTCTACCTCAGCCAGGGATGTTTTGATGTGACGGCAGACATGGGGTACCACTGCATGCGCTGTGAGGGGGCAGCGCTGGAACAACTGGCCCAGGGGGACACTTAAACACCACCCGCCCCCCACTGGGTTGACGTCTGACCATTGCAATACTGAGGTCAACCTAGAACATATGCAGGGATAAAGAACCAACTCAAAGCACCTGTCTCAATACTTAAAAAATGCACCTTTCCTTTCCTTCTTCTTTTCCTTTCCTgtagtaaagtagtcactgaTTTAATATGATTGAATAGGCGAACATTAGGGAATTATTTGCATAGCTCTCATTAATCTACTAATATCAGATCAGTGATTACCTAACGAAACGAGGAAGACAGGATGTATTTTCAAAGTGTTGGAACGATGCCAATGCAATGCAAAAAGGTTGTAGCTGAACTAACAGTTCACCAACTATCTTATAGTTGTTGACATTAGTTGTGTGAACAGTAATGTGTTGTTTACCTGTGACCCCATAGCACCTTTCCCTGCTTTCTAAGCTAAGGTAAGAGACACCCATTGATAGTATGTGAGAAATCTGGTGAAACGGGAACCTATACAATACTATAAATCACAtgagagcttgggactataaggttctacaGTATGTGCATTTTTGTCAACATTTTGTTATTGACACAACCATGTTCTTTCTGTTTAAAGTACTCTTAATTCCCCAATTCCTGTTAAGTTCAAACGAAATACAAGATAAAAAGgtctgacaccattcaaaccagtGGGTTTTGAAAtttaaagccaattatctcagaatcatctttttTTTCAGATATAACCTTATCCCAAGCTCTCCACCTGTCAATGGATGATTATAACTACTGTATAATTGTTGTTGTGATGAAgcacaatgtgatttttttcaaCTGATTCCTGTTTCACCTTCAACAGGATGGAATGCCTGTTTAAGTTACTTGATTAGCTTCTGCAAGCTCAGGCTGTTGCTTTAAGCAAATATGACAAACCAAGGCTTGTAATTTGCGATAGTGATTCaagaacattttttaaaaatagatttattttaatgaaaatatgtttgatctgatttatttattttaaatctcAAGATTATTAGATGGTGGGCAATAACACTACGAAAAAGGCAATTAAATATGGCATTAGCTTATAGTTCTATTCGTGGCATTTTCCAtcaacaatacattacaatatgTTGTTCACCATCAACCTATAAACTaagcaaaaacaatcaagcaaagCAATTACATGAAATACGGTGATTAAGCTACAGTAGATCAAAGACCAATCTTACCAGCAATTATAATAACGTACCATATAAGATAGTACTCTGGATATGTATTGCAAACAGTCTCTTTATGTCTATTGTAAATCACAACTTAGAGAGCTGTCAAGTGTAGAGCAACGATGAGGATGTTGTGGACTGGGCAGATACAGGGTCAAGTCTGTCTGTAAAAACTgacattggtgtgtgtgtttttttattttttaaatgatggcTTGTCCACTTTCTCTCACGTCCACTTTATAGAGCACCGTTAGAGTCATTGGTAGGTGTATAACTCCTCGATAAAGGTAGCACTTTGTGGTATTTGTTGTCCAGCAGCCAAATAGTTTGTCAGAAGCAAAAACTTCAATGTTGGTATATAGGCTACAAAGAGTTACATGAGTTGAAGTCTATAGTTTACAGTGTTgctattagatttttttttttttttacctccatTGAGTTGGTGTTTTAAACAAAAAGCCACTTAATCCCACTTCTGTTGTCGCTATGTAAAACAGTCAACCTTTTACACTTCGAAATCACTGTAAGaaccttgttttttttgtgtaaacACACTTCTTGTTGCATTGAAGATGACATTAAAGGCTACTTGTTGTGAATGTTACACACTGTGGAATAAAGTGATGTGCCAATACA

Function

NR:

description
PREDICTED: diamine acetyltransferase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577985.2 True 2506 mRNA 0.39 6 45677661 45686049

Neighbor

gene id symbol gene type direction distance location
si:dkey-19b23.7 LOC106608757 coding upstream 29412 45642861 ~ 45648249 (+)
si:dkey-38p12.3 LOC106608755 coding upstream 111919 45544516 ~ 45565742 (+)
LOC110500870 LOC106608752 coding upstream 160428 45485247 ~ 45517233 (+)
nectin4a LOC106608750 coding upstream 202747 45455659 ~ 45474914 (+)
fcer1g LOC106608748 coding upstream 227949 45444361 ~ 45449712 (+)
LOC110500573 LOC106608761 coding downstream 2401 45688450 ~ 45702662 (+)
LOC110500577 lsmd1 coding downstream 58561 45744610 ~ 45755368 (+)
cnpy4 cnpy4 coding downstream 162137 45848186 ~ 45850007 (+)
LOC110500584 LOC106608769 coding downstream 183838 45869887 ~ 45888657 (+)
LOC110500588 LOC106608772 coding downstream 256108 45942157 ~ 45944870 (+)
G1743070 NA non-coding upstream 1819 45675440 ~ 45675842 (+)
G1743069 NA non-coding upstream 2314 45675106 ~ 45675347 (+)
G1743068 NA non-coding upstream 2815 45674641 ~ 45674846 (+)
G1743060 NA non-coding upstream 12446 45664994 ~ 45665215 (+)
G1743039 NA non-coding upstream 44285 45633138 ~ 45633376 (+)
G1743076 NA non-coding downstream 17127 45703176 ~ 45706460 (+)
G1743087 NA non-coding downstream 26654 45712703 ~ 45712910 (+)
G1743089 NA non-coding downstream 29862 45715911 ~ 45716144 (+)
G1743090 NA non-coding downstream 31924 45717973 ~ 45718186 (+)
G1743091 LOC106608762 non-coding downstream 32338 45718387 ~ 45718742 (+)
G1743043 NA other upstream 37919 45639296 ~ 45639742 (+)
LOC110500529 LOC106608720 other upstream 1205097 44461338 ~ 44480565 (+)
G1743077 NA other downstream 21093 45707142 ~ 45709950 (+)
G1744645 NA other downstream 1477855 47163904 ~ 47236823 (+)
G1746210 NA other downstream 2408718 48094767 ~ 48095119 (+)
G1746471 LOC106608612 other downstream 2639051 48325100 ~ 48363926 (+)
G1747255 NA other downstream 3291277 48977326 ~ 48977758 (+)

Expression


Co-expression Network