LOC118942789


Basic Information

Item Value
gene id LOC118942789
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45793438 ~ 45796870 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956496.1
TTGCAATGGTTCTGCTTTGCCCTGAGGGTGCATTTCAAAACATCCTACCTCAATGGTAGAAGTTTCAAAGTTGACTAATTATGGCACAAGCTGTGAGGCTACATGGTAACGGAAAAGCAAAAATCTTGACAGATTCACTCCTTCACAAAAGAGAGTCCTTTTAGATTTAAAGGACTCACAAAAGATGGAGACTTCACAGAGGTCTCCCGTTCTGTCATCCTGTCTGATCTCAataatagTTGTGCTGAATATCATCCTGTGGATGTTTCTAATGTCAGCAGTGGGATTAGGGGCTATGCACCTACATGACTGCCCCTTACAGCCTTATATCCCCATCTACCTGCTGGTGATCGGGCTGACGTCCATCGCCTCCCTGCTCCTAGCCTACCTCAATAACACACTGGAGACTGGCTTCCTGAGCCTACTGTGTTCCTCCTGCATCTTCCTCCTCCAACTCTTCAACCTCGGCTGGTTCATCACAGGGAGTGAGTGGGTGTACTCCATATATCCCCCGAACTATGACACGAATGGTGGAGAGAAGTACTGTCAGAGGAAGATATACCTGTTTGCTTTCTGGTTCAACAGCCTGGGCAGCATCTGTATGGCTGTGGTGTTCTTCTGTGGAGTGTTCTTCATCTTCCTTGCCTGTGTGAAAATGGCATTTAGGGGACACCATCTACTCCATTCACATAAGAGATCGTATGGTGTGGACGCTTGAGAACTCCATGGCACAGAAACCTCACTAACATGGTTTTgctgttctttctttctttctttctttctttctttctttctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956496.1 True 837 mRNA 0.46 5 45793438 45796870

Neighbor

gene id symbol gene type direction distance location
zgc:103586 LOC106608798 coding downstream 13257 45778517 ~ 45780181 (-)
LOC110500580 LOC106608767 coding downstream 15292 45772952 ~ 45778146 (-)
cldn15a LOC106608766 coding downstream 27213 45763701 ~ 45766225 (-)
dnajc3b LOC106608764 coding downstream 30037 45756366 ~ 45763401 (-)
LOC110500575 NA coding downstream 53725 45735907 ~ 45739812 (-)
LOC118942807 NA coding upstream 5819 45802689 ~ 45803599 (-)
LOC118942790 NA coding upstream 6832 45803702 ~ 45808549 (-)
LOC110500942 NA coding upstream 12565 45809435 ~ 45813290 (-)
LOC110500582 LOC106577643 coding upstream 18196 45815066 ~ 45836958 (-)
LOC110500586 LOC106608770 coding upstream 96468 45893338 ~ 45925598 (-)
G1743414 NA non-coding downstream 48873 45744140 ~ 45744565 (-)
G1743413 LOC106584613 non-coding downstream 52878 45740058 ~ 45740560 (-)
G1743409 NA non-coding downstream 56529 45736680 ~ 45736909 (-)
LOC110500574 LOC106608762 non-coding downstream 88180 45703162 ~ 45734292 (-)
LOC110500592 LOC106608778 non-coding upstream 245374 46042237 ~ 46125028 (-)
G1743608 NA non-coding upstream 301548 46098418 ~ 46099413 (-)
G1743695 NA non-coding upstream 372217 46169087 ~ 46171732 (-)
G1743705 NA non-coding upstream 379333 46176203 ~ 46176412 (-)
G1743710 NA non-coding upstream 384420 46181290 ~ 46181496 (-)
G1743429 LOC105030512 other downstream 21007 45770822 ~ 45772431 (-)
G1742845 dock11 other downstream 498699 45287791 ~ 45294739 (-)
G1742473 LOC106608730 other downstream 924795 44864416 ~ 44868643 (-)
G1741446 NA other downstream 1615736 44175184 ~ 44177702 (-)
G1743697 NA other upstream 375097 46171967 ~ 46173734 (-)
G1746833 LOC106608613 other upstream 2611621 48408491 ~ 48410753 (-)
LOC110500878 LOC102779023 other upstream 3623608 49392218 ~ 49424330 (-)
G1747906 LOC106608620 other upstream 3662818 49459688 ~ 49585178 (-)

Expression


Co-expression Network