LOC110500586 (LOC106608770)


Basic Information

Item Value
gene id LOC110500586
gene name LOC106608770
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45893338 ~ 45925598 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036957987.1
AGGGACTCCTAATCCTCGTCATCCTCAAGGTGTGTGGACTCACTGGTGCTGTCCCTCACGTCCTGCCAGTTCTCCTCATAATCTGTCCCTATGCTCTTTTTCCCATCACGGAACTTCCCCTCCCCGCCAGCAGGAAGTGCTTTGTCCTCCAGGGAGAGCCGGCTGCTGTGGTAGCTCCTAGGGTTCAGGGTGGTGTCGCTGGTAGGCTGGAGCTCCACTCTGGAGTCTGACAGAGCAGCGGAAAAGGGAAAGTCAAAGATACACACTCCCAGTCGCCTCACCCAGACACCCACGGATATTGTTACAGTTATATCAGTGCAATGGAGTTATTCAAGGAGGCAGTGGATTACCTTGAGACACAGCATATCCCAgTGGAGGCTGTAGGTGGTACAGGGCCTGATCCACTGGAGGATGATGTGTTTCCAGAGGAGGATGTGTTCTCCCCCCTCCAGACAGACAGCATGGACCTGCCCGACACCCCCGTCCTGCGTACCCTGGAAGAGATGCTGGTTAGGAGGCTCATGGTCCTGAGAACGGTCCTGGACAGTGAGAAGATCTACCTCAATGAGCTAGAGACACTGTtaatgCCTATGAAGGCCTTGAAGGCCACAGCAGGGACGTCTCAGCCAGTTCTGTCCAGCCAGCAAGTCCGAACTGTGTTCTATCAGGTGCCTGAGCTCAGAGACCTGCACAGAGACTTCTACACTTGCCTGAGGGACCGCCTGGGGCCGCTGGGGCCACAAATACACCCAGAGACAGACCCGAGGCAGGGGCCGGGGAAAGAGCAGGGCCAAATGGGCTTCCACCTAACTGTTGGAGACCTCTTCCTTAAGATTgtgagccAGATAGGTGTGTATCGTGGTTTCATAGATAACTATGAGAGTGCTGTGGAGATCGTGAGGAGGTGTACTCAGACTGACAAGCGCTTCAGAATACTGGCTGAGAGTATGATGTTTTATAATGGATCAGACAAATCTAAGACGGAATACACCTTTGAGGCTCTGCTGTACAAGCCTCTGGACAGAGTCACCAAGACAACCTTAGTGCTGCATGACCTGCTGAAGCACACTCCCCAGACGCATGGTGACCACCCCGTGCTGCTGGAGGCTCTGAGACTGTCCCAGAGCTTCCTGTCTGGGGTCAACGAGGGGTCACAGTGCAAACAAGAGGTCACCCTCAGCAGGGGCATgcggCGTCAGCTGATGCGTGATGGCTTCGTGGTggatgtgtgtgagggggggCGTAACCTTTGCCATCTCTTCCTGTACACTGACCTGCTGCTATGCACCAAACTCAAGGGCGGGGCCCAAGGTAAGCAGGCCCAGTACAGGTTCTGTTGGTACCTGCCTCTAGCTGGACTGAAACTCCGCTGGGGACCAGAGATGGAGcgcaccacagacacacaccagcgCATACACACCATGAGAGCTAAGATGTACGTGCTCAGACACGAACTGCGACAGATCATGaaGCCTGTCCCACTGAAGTCCTTGGCCGCTCGAACTTCAGAGCGAGGCAGGAAGAAGATGGAGCACCTTGAACTGATGTTTCTCACAcagtctcccttcctccccctggaACTACACAGCCCCAGCggcaagAGCCATACTCTGGTGATGTCATCTCTGTATGAactagaggagtggagagaggccATCCACAGACTCACCGGAGATAACATAGAAACGGTTCCTCCAGATCTGCTCACCTTGACCAGCTCCTGTGTTAAACTGAGAATGACCCAACAGCCTCCCCTACACGGCATACTGCCTCaaAGTGAGGAGGAGTCTCTATGTGGGACTCTCAGTGTAGCCATTCACTCTGCCTGTGGATTACAACAGCCAGCCAgtgtgtatgtgtgtgtggaggtggatGGCTTTGAGTTCTATGAGAGCCAAGCCCAGACCCATTCCTCTGTCAGCAGCCTCAGCCCTCACTGGGACCAGgaGTTCTCATTCCAGGTGGATGGGGCTCAGAACCTCAGGGTGctggttgtgttacagccagaGGTAGGAAAGATCTGTGAGGGCCAAGTCCTTGGCAAGACCTCCATACAGCTGGACCCAGCCCTCCTACAGAAGCGATGGAGGAGACAGAATGTATCTCTAGGCCAGGTGGTTGTGAGTCTGTCTCTAAAGTACTACCCTCACCCTCTAGACCGGCCCAGTCTGGCCCCCGCCCAGCAACAGCGCATCTTCTGCATGCCCATTGGAGATGTGGCACAACAGGAGGGAGTCCTGGTGCCACATGTGGTGCGTTGCTGtgtagaggaggtggagaggagaggaatggaggaggtggGCATCTACAGGCTATCAGCAGCTACCAGTGACATCAACAACCTCAAGACTGCCTTCAACAccaACCTGCGTGAGGCAGTGTCCAGGTTGAGGTGTGTAGATGTGAATGCTGTCTCAGGTATACTGAAGCTCTACTTCAGGGAGCTGCCGGAACCCCTTATACCTACAGAGCTGTTTCAGAGCTTCACCAAGGCGTTGgACATCCCAGACCTGAGCTCCAGGAGTGTGTCCATGTTGTCTCTGCTCCAGTTCTGTCCCTCCGTCAACCAAAACACCTTCctgttcctcctccaccacctcaaACGAGTGTCAGATAGACAGGATGTGAACAAGATGCCTCTAATGAACCTGGCCACTGTGTTTGGTCCCAGTCTACTGCGCCCCCCTGTGGCTGTTCTGGGGCAGAGCAGCCCGCCAGTGGACATTTCTCAGGAGGTGGTGGTGCAGGTCCAGGTTGTGTATTCCTACCTGCAGTGTGACAACCTGCCAGCAGCCCAGACCTGCTTACCACATGACACAGCGACCACTGAGGAGGATTAGACAACCAGCAAGTGAACCAACTCCTGGAAACCTCACGGTTGGCCAACAGAAActaaagggagaaaaaaaagaagacttgtaaactacagacactgtAAAGATTAAATTTATTTATTTGGGTTGACA

Function

NR:

description
PREDICTED: active breakpoint cluster region-related protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036957987.1 True 2966 mRNA 0.54 23 45893338 45925598

Neighbor

gene id symbol gene type direction distance location
LOC110500582 LOC106577643 coding downstream 56380 45815066 ~ 45836958 (-)
LOC110500942 NA coding downstream 80048 45809435 ~ 45813290 (-)
LOC118942790 NA coding downstream 84789 45803702 ~ 45808549 (-)
LOC118942807 NA coding downstream 89739 45802689 ~ 45803599 (-)
LOC118942789 NA coding downstream 96468 45793438 ~ 45796870 (-)
LOC110500587 LOC106608771 coding upstream 3217 45928815 ~ 45940039 (-)
LOC110500589 LOC106608774 coding upstream 41153 45966751 ~ 45981315 (-)
LOC110500590 LOC106608773 coding upstream 55850 45981448 ~ 46003506 (-)
LOC110500875 LOC106608799 coding upstream 77958 46003556 ~ 46004815 (-)
LOC118942937 NA coding upstream 85837 46011435 ~ 46017296 (-)
G1743414 NA non-coding downstream 148773 45744140 ~ 45744565 (-)
G1743413 LOC106584613 non-coding downstream 152778 45740058 ~ 45740560 (-)
LOC110500575 NA non-coding downstream 153526 45735907 ~ 45739812 (-)
G1743409 NA non-coding downstream 156429 45736680 ~ 45736909 (-)
LOC110500574 LOC106608762 non-coding downstream 188080 45703162 ~ 45734292 (-)
LOC110500592 LOC106608778 non-coding upstream 116646 46042237 ~ 46125028 (-)
G1743608 NA non-coding upstream 172820 46098418 ~ 46099413 (-)
G1743695 NA non-coding upstream 243489 46169087 ~ 46171732 (-)
G1743705 NA non-coding upstream 250605 46176203 ~ 46176412 (-)
G1743710 NA non-coding upstream 255692 46181290 ~ 46181496 (-)
G1743429 LOC105030512 other downstream 120907 45770822 ~ 45772431 (-)
G1742845 dock11 other downstream 598599 45287791 ~ 45294739 (-)
G1742473 LOC106608730 other downstream 1024695 44864416 ~ 44868643 (-)
G1743697 NA other upstream 246369 46171967 ~ 46173734 (-)
G1746833 LOC106608613 other upstream 2482893 48408491 ~ 48410753 (-)
LOC110500878 LOC102779023 other upstream 3494880 49392218 ~ 49424330 (-)
G1747906 LOC106608620 other upstream 3534090 49459688 ~ 49585178 (-)
LOC110500619 LOC106608618 other upstream 3573893 49493629 ~ 49502064 (-)

Expression


Co-expression Network