XLOC_036311



Basic Information


Item Value
gene id XLOC_036311
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 16218254 ~ 16254661 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00072411
GGAAGACGTGCTATTTGTGACGATGAGTTCCTGCTGGAGTTGCTCTTCTGGAGTAATTTAAGACGACCTGTTTTCAGTTACAAGTAAAACAAAGTTGTGAGATGTCTTCCTCAATTGTGATCCTGCCGTGAGCTGATAGGTGTGTGTGATGAGTTGATGATGAGGTCTGCATGTGATTACAGAGAGAGACACTGAAGGGCTCGACTGGACACAAATGCCACTGCTGAGACATCAGTCAGATACATTCAGCGGTTTCTCTCCGCGGCTTTAATGTAGAGGATTCTAAGAAGAAGAAATGACCAGACAAAAGCGCCTGTGAGACACTGCTTCATTTGACGAGTGCTGCTGTGATGGCCACGCTTCAAAACACCACTTTATGTTGGTGTGTGTTTTCGCTTTTCAAatcttacatttttttgagaaagACCACAGGGAATTGAAAACATACTGAGGGCCCTTAGGCTGATCACATGTTCCCTTTCTATCATAAATGGGAACCAGTTACGCTGGAGGGAAACTCAGTCTGCATGCGGATATCACACTCATTAAAACATGC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00072411 True 556 lncRNA 0.44 3 16218254 16254661

Neighbor


gene id symbol gene type direction distance location
XLOC_036310 CR931780.1 coding downstream 153844 16062172 ~ 16064410 (-)
XLOC_036308 agbl4 coding downstream 226453 15633454 ~ 15991801 (-)
XLOC_036309 CR931780.2 coding downstream 301927 15916210 ~ 15916327 (-)
XLOC_036307 FP017128.1 coding downstream 585407 15632732 ~ 15632847 (-)
XLOC_036306 bend5 coding downstream 697347 15502785 ~ 15520907 (-)
XLOC_036312 dmrta2 coding upstream 2559 16257220 ~ 16259063 (-)
XLOC_036313 NA coding upstream 9269 16263930 ~ 16268947 (-)
XLOC_036314 faf1 coding upstream 20117 16274778 ~ 16406440 (-)
XLOC_036315 rnf11b coding upstream 170061 16424722 ~ 16464453 (-)
XLOC_036316 ttc39a coding upstream 215697 16470358 ~ 16559241 (-)
XLOC_036303 NA non-coding downstream 966785 15251183 ~ 15251469 (-)
XLOC_036301 NA non-coding downstream 1136589 15078036 ~ 15081665 (-)
XLOC_036317 CU467861.7 non-coding upstream 311176 16565837 ~ 16566479 (-)
XLOC_036318 NA non-coding upstream 311887 16566548 ~ 16584612 (-)
XLOC_036319 NA non-coding upstream 315858 16570519 ~ 16577750 (-)
XLOC_036322 NA non-coding upstream 354961 16609622 ~ 16613663 (-)

Expression



Co-expression Network