LOC110500634 (LOC106608634)


Basic Information

Item Value
gene id LOC110500634
gene name LOC106608634
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 50095682 ~ 50169597 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578115.2
TGCACAAAACAGCGCATGCGTCTTACTTTGCTCCTCAGTCTGAAACTCGGGGGTTGAGTTCAATTAGGAGAGACCATGTCCGCCATCAGCCATTTGCACTCCTATATCTTCTCATTTAGAACAAATTCTCGATGAAATAGCGGTTGCACGCGGCCTCAAGAATGGCCACGTCGGGTGCTGTTCAGGTGAAACTAGAACTCGGACATCGTGCCCAGGTCAGAAAGAAACCCACCGTGGAAGGCTTTACGCACGACTGGATGGTGTTTGTCCGAGGACCAGAGCACAGCAACATTCAGCACTTTGTGGAAAAAGTCGTTTTTCACCTGCACGAAAGCTTCCCAAGACCAAAACGAGTGTGTAAGGATCCACCCTATAAAGTGGAGGAGTCTGGATACGCAGGCTTCATCTTGCCCATTGAAGTTTACTTCAGAAATAAGGAAGAACCTAAGAAAGTGCGCTTCGACTACGACCTGTTCCTACACCTGGACGGCCACCCGCCTGTCAATCACCTGCGCTGCGAGAAGCTCACCTTCAACAACCCCACGGAGGAGTTCCGCAGGAAGCTGCTCAAAGCCGGCGGGCAACGGGATCCTAGCAAAAGAAGTTTGGAAGACTCTAAAGTGATGGTAATGCAGGAGGGCTCCACATCTCTGTTCGGCCAGCATCTCAAGCTGCCTACCCTCCCCAGCAGCTCCCTGACATTGACATTGTCTGATGCTAAGAAGAGCAAGGTCTTCCCGGGGTCAAAGGACAGCTCCAAAGGAACTGGCGCcctcctcaccaccaccaccactaccactactaatagTAGCAgctcatccaagctactcaaacCCTCACAGGACCACAAAGACAAGCCTTCAAAAGAGACCAAAAGTGCCTTCCGAGACAGTGGCAGGGAACCCAGCAAAGCCTCCAAAGATTTCGCCAAGAAACCCAAAGAGAACCAGCCTCTTCTTCGTGACAACCCCCCCATCCCCAAGATGGGCTTCAAGGAGCCCAAGACCATGTCCAAGGAGCACCGGCAGGACGGGGGCTACTTGCATGGGGCCGGGTCTGGGGCGGGGACTAACAAGCGACTGTCTGTCACTGACTGCGAGGACCACGTGgccaaaaagaaaaagaaaaacttaGCGGAATTGTCGTTAAAACCGACAGGGGGCTCGTCCCTGTCGCACGCCCAGTCCCACCACTCGGATAAGAAACTGCTGAAGGACAAATCCCAGGTGCACCCCGCTAAACTGCGGGTGGACGGCCGCGAGGTGCTGGGGGAGCGCAGAAAGGCGTTTCCGGAGCTGATGGACGCCAACTACTCTGACATGGAGGACAATATGTCCACCAAATCAGTGtCGGAGCAGCCCAGTCCGGCCAGCTCCAGTTCCAGCTCCAGCTCAGGCTTTGCAGCCAGCCACAAACGGCAAGTGGCCGAGTTCGTCCGCAGGAAGGTAGGGGCCGTCCCTGGCACAGCCCACACAGtgttaggTCCCCTTCGTTCGATAATCCATGACCTGCAGTCGGAAGACAATGAGGATGACTCGGAGGACGACGACGACATGGACTCTGACCTGGAGCGACCGGTGCACACGCACATGACACACCGCCATCGCCGGGTCAGCTTGAGTGACGGCAGTGAGAGCGAGAACAGCTCAGCCCCCTCTCCCCACTCTCGACACGAGCCCCCGCCTTTACTGAAGACCAGTAATAACCAGATACTGGAGGTGAAGCAAACAAAGCAGGATAAGAATAAAAACATTGACTGTGACAAGGCTTACCTGGATGAGCTGGTGGAGCTACACAGACGACTGAtgacactgagagagaggcacATACTACAACAGATCGTGAACCTCATCGAGGAGACTGGACACTTCCACATCACAAACACAACTTTTGACTTTGACCTCTGTTCCCTGGACAAAATCACGGTACGGAAGCTCCAGAGTTACCTGGAAACGTCTGGGACGTCATGAGGTCTGGAAGCAGCAAGCTGCCACGAGGAAGAACTTTGGATTCTTCCTCTTATTTGAACTTTCTCTGCGTTGCAAAAAAGACTACCGGCCGGCCCCTGCCCTGGGTCCTTGTGCCTGGCGGTTATGGTCGCGCCGCTCTACTCATTGGAACCTGGCTCTCCACACGACCAGGGTAGCCCGCGAGCAACACAGACCTGAACGGCGTGTCGCATCACCCTTGAGATGAGTCCTGTCGACCAGGAATATCACCCAGAAAGCCTTGAAAGAATTCCACAGTTAACAAAACAAACCGGGGGAAAGAAACGGAGACCTTGCTCTTAAAACGAATGTGCATATTATTATCATGTATGTGTGTAGAATTTTTTGTTCTTTGTGATGAATGATGCATGTTCAACACTGCCTTACCACATGTGTCAGTCTTTATTTATTGAGTTTGAGTTTCAGGTGTGCGTGTTAATAGTAGCAAAACAGAATTAGTCTTGTGCAAGCACTTCACAATATGCATCTCTCTGGCTCTGGAAGGATGGTGGAGCAACGTTGAGATTTCAATTATCTCATGTGACGGATCAGTCaatcgtccctctctctctatgaggAATTCTGCCTTCTCAAACGATATGTTATCAGTGCCCAATTGTACAAGCTGAGACCAATCATGGACTCACAATTGTATTAATTGCATCAATTTATATTCTATTCTTGGTACCTAAACTTAAATTGATGTATTGGATGATGACTAGGCACATTTCAGAAGTGTGCTGCATGTCGTTTTTACAAGCTCTCGCTTGTATTCCGCAGCTCTTGCTGTCCACAAGTTGaaaccaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgaccaaTCTATTGTCAGCAGGCCTGTGCTAAAAATGAACCATTTTGAATCCTGGAATTTTGATGGAAGAAATGTACTCAAAGACATTGAATCTTATTTATTTCACGGGGACCTTGGTTGCCAAATCAAAGTTGTGCATTAGAATTGAGAAAAAAATAGAACTgagaaaacaacatgtttttgTTCACGTTGTTCTGGAGGACATTTTCCTTTTTGCTAATCTGAGGAATTAATGTTGATTTGGTTTAGTCTGCTGAGCGACGCCTCAATGGGAATACCAGTGGTCGTAGCTACTCACTGGGCCACACAAAGGCAGTATGTTGTGTTTTGCTTGACCCATGTCTGCCTTAAGTTCTTGTGTATTCTTAGGACATTCaataaaatgtgtattttgtaCAGATGAGGACATGTGCAACCTGTGGTGAAAGCAGTTATTGGCACGGTGTGACTTTTAAATGAGTCTTTTTGTATGTTGTTGCAATGTCCTGTTGATTGACTCGCATTTTCTCCCTAATTTCTCCAGTTTAATTTCTAAGCCCAAAGATGTATGTTTTGGTTGGGATGTCATGATGTAGTCTTTATTTGCATATAAACTGTATATGTGATAA
>XM_036958097.1
GCAACAGCCAATTCACAGCCTCTGACGCAGCTATAACATTCACTCCCAACGACTTAACAAAGCAGCCACAGCAGCATCCACACGACTGCAGCCCAAGCTTATGACCCGGGTGCTGTTCAGGTGAAACTAGAACTCGGACATCGTGCCCAGGTCAGAAAGAAACCCACCGTGGAAGGCTTTACGCACGACTGGATGGTGTTTGTCCGAGGACCAGAGCACAGCAACATTCAGCACTTTGTGGAAAAAGTCGTTTTTCACCTGCACGAAAGCTTCCCAAGACCAAAACGAGTGTGTAAGGATCCACCCTATAAAGTGGAGGAGTCTGGATACGCAGGCTTCATCTTGCCCATTGAAGTTTACTTCAGAAATAAGGAAGAACCTAAGAAAGTGCGCTTCGACTACGACCTGTTCCTACACCTGGACGGCCACCCGCCTGTCAATCACCTGCGCTGCGAGAAGCTCACCTTCAACAACCCCACGGAGGAGTTCCGCAGGAAGCTGCTCAAAGCCGGCGGGCAACGGGATCCTAGCAAAAGAAGTTTGGAAGACTCTAAAGTGATGGTAATGCAGGAGGGCTCCACATCTCTGTTCGGCCAGCATCTCAAGCTGCCTACCCTCCCCAGCAGCTCCCTGACATTGACATTGTCTGATGCTAAGAAGAGCAAGGTCTTCCCGGGGTCAAAGGACAGCTCCAAAGGAACTGGCGCcctcctcaccaccaccaccactaccactactaatagTAGCAgctcatccaagctactcaaacCCTCACAGGACCACAAAGACAAGCCTTCAAAAGAGACCAAAAGTGCCTTCCGAGACAGTGGCAGGGAACCCAGCAAAGCCTCCAAAGATTTCGCCAAGAAACCCAAAGAGAACCAGCCTCTTCTTCGTGACAACCCCCCCATCCCCAAGATGGGCTTCAAGGAGCCCAAGACCATGTCCAAGGAGCACCGGCAGGACGGGGGCTACTTGCATGGGGCCGGGTCTGGGGCGGGGACTAACAAGCGACTGTCTGTCACTGACTGCGAGGACCACGTGgccaaaaagaaaaagaaaaacttaGCGGAATTGTCGTTAAAACCGACAGGGGGCTCGTCCCTGTCGCACGCCCAGTCCCACCACTCGGATAAGAAACTGCTGAAGGACAAATCCCAGGTGCACCCCGCTAAACTGCGGGTGGACGGCCGCGAGGTGCTGGGGGAGCGCAGAAAGGCGTTTCCGGAGCTGATGGACGCCAACTACTCTGACATGGAGGACAATATGTCCACCAAATCAGTGtCGGAGCAGCCCAGTCCGGCCAGCTCCAGTTCCAGCTCCAGCTCAGGCTTTGCAGCCAGCCACAAACGGCAAGTGGCCGAGTTCGTCCGCAGGAAGGTAGGGGCCGTCCCTGGCACAGCCCACACAGtgttaggTCCCCTTCGTTCGATAATCCATGACCTGCAGTCGGAAGACAATGAGGATGACTCGGAGGACGACGACGACATGGACTCTGACCTGGAGCGACCGGTGCACACGCACATGACACACCGCCATCGCCGGGTCAGCTTGAGTGACGGCAGTGAGAGCGAGAACAGCTCAGCCCCCTCTCCCCACTCTCGACACGAGCCCCCGCCTTTACTGAAGACCAGTAATAACCAGATACTGGAGGTGAAGCAAACAAAGCAGGATAAGAATAAAAACATTGACTGTGACAAGGCTTACCTGGATGAGCTGGTGGAGCTACACAGACGACTGAtgacactgagagagaggcacATACTACAACAGATCGTGAACCTCATCGAGGAGACTGGACACTTCCACATCACAAACACAACTTTTGACTTTGACCTCTGTTCCCTGGACAAAATCACGGTACGGAAGCTCCAGAGTTACCTGGAAACGTCTGGGACGTCATGAGGTCTGGAAGCAGCAAGCTGCCACGAGGAAGAACTTTGGATTCTTCCTCTTATTTGAACTTTCTCTGCGTTGCAAAAAAGACTACCGGCCGGCCCCTGCCCTGGGTCCTTGTGCCTGGCGGTTATGGTCGCGCCGCTCTACTCATTGGAACCTGGCTCTCCACACGACCAGGGTAGCCCGCGAGCAACACAGACCTGAACGGCGTGTCGCATCACCCTTGAGATGAGTCCTGTCGACCAGGAATATCACCCAGAAAGCCTTGAAAGAATTCCACAGTTAACAAAACAAACCGGGGGAAAGAAACGGAGACCTTGCTCTTAAAACGAATGTGCATATTATTATCATGTATGTGTGTAGAATTTTTTGTTCTTTGTGATGAATGATGCATGTTCAACACTGCCTTACCACATGTGTCAGTCTTTATTTATTGAGTTTGAGTTTCAGGTGTGCGTGTTAATAGTAGCAAAACAGAATTAGTCTTGTGCAAGCACTTCACAATATGCATCTCTCTGGCTCTGGAAGGATGGTGGAGCAACGTTGAGATTTCAATTATCTCATGTGACGGATCAGTCaatcgtccctctctctctatgaggAATTCTGCCTTCTCAAACGATATGTTATCAGTGCCCAATTGTACAAGCTGAGACCAATCATGGACTCACAATTGTATTAATTGCATCAATTTATATTCTATTCTTGGTACCTAAACTTAAATTGATGTATTGGATGATGACTAGGCACATTTCAGAAGTGTGCTGCATGTCGTTTTTACAAGCTCTCGCTTGTATTCCGCAGCTCTTGCTGTCCACAAGTTGaaaccaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgaccaaTCTATTGTCAGCAGGCCTGTGCTAAAAATGAACCATTTTGAATCCTGGAATTTTGATGGAAGAAATGTACTCAAAGACATTGAATCTTATTTATTTCACGGGGACCTTGGTTGCCAAATCAAAGTTGTGCATTAGAATTGAGAAAAAAATAGAACTgagaaaacaacatgtttttgTTCACGTTGTTCTGGAGGACATTTTCCTTTTTGCTAATCTGAGGAATTAATGTTGATTTGGTTTAGTCTGCTGAGCGACGCCTCAATGGGAATACCAGTGGTCGTAGCTACTCACTGGGCCACACAAAGGCAGTATGTTGTGTTTTGCTTGACCCATGTCTGCCTTAAGTTCTTGTGTATTCTTAGGACATTCaataaaatgtgtattttgtaCAGATGAGGACATGTGCAACCTGTGGTGAAAGCAGTTATTGGCACGGTGTGACTTTTAAATGAGTCTTTTTGTATGTTGTTGCAATGTCCTGTTGATTGACTCGCATTTTCTCCCTAATTTCTCCAGTTTAATTTCTAAGCCCAAAGATGTATGTTTTGGTTGGGATGTCATGATGTAGTCTTTATTTGCATATAAACTGTATATGTGATAA

Function

NR:

description
protein AF-9-like

GO: NA

KEGG:

id description
K15187 MLLT1_3, ENL, AF9; YEATS domain-containing protein 1/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578115.2 False 3434 mRNA 0.49 14 50095682 50158478
XM_036958097.1 True 3369 mRNA 0.49 14 50095682 50169597

Neighbor

gene id symbol gene type direction distance location
LOC118942791 NA coding downstream 276318 49811815 ~ 49819364 (-)
trnaa-ugc-150 NA coding downstream 429143 49666464 ~ 49666539 (-)
LOC110500626 LOC106608623 coding downstream 441198 49636019 ~ 49654484 (-)
LOC110500879 LOC106608620 coding downstream 510483 49583452 ~ 49585199 (-)
LOC110500622 LOC106608618 coding downstream 512355 49579676 ~ 49583327 (-)
LOC118942942 NA coding upstream 76945 50246542 ~ 50248992 (-)
LOC110500638 LOC106608637 coding upstream 81544 50251141 ~ 50257665 (-)
LOC110500880 LOC106608636 coding upstream 102456 50272053 ~ 50288270 (-)
LOC110500642 LOC106608642 coding upstream 169350 50338947 ~ 50341393 (-)
LOC110500881 LOC106608643 coding upstream 186577 50356174 ~ 50389454 (-)
G1748889 NA non-coding downstream 12358 50081656 ~ 50083324 (-)
G1748854 NA non-coding downstream 41912 50053523 ~ 50053770 (-)
G1748849 NA non-coding downstream 47763 50047529 ~ 50047919 (-)
G1748843 NA non-coding downstream 51845 50042219 ~ 50043837 (-)
G1748844 NA non-coding downstream 54762 50040304 ~ 50040920 (-)
G1748954 NA non-coding upstream 17525 50187122 ~ 50187336 (-)
G1748959 NA non-coding upstream 29661 50199258 ~ 50199585 (-)
G1749004 NA non-coding upstream 101383 50270980 ~ 50271190 (-)
G1749013 NA non-coding upstream 184296 50353893 ~ 50355710 (-)
G1747934 NA other downstream 506894 49587696 ~ 49588788 (-)
G1747906 LOC106608620 other downstream 510504 49459688 ~ 49585178 (-)
G1747908 LOC106608618 other downstream 581518 49512069 ~ 49514164 (-)
LOC110500619 LOC106608618 other downstream 593755 49493629 ~ 49502064 (-)
LOC110500878 LOC102779023 other downstream 671352 49392218 ~ 49424330 (-)
LOC110500654 LOC106608650 other upstream 364408 50534005 ~ 50542563 (-)
G1749122 LOC106608652 other upstream 372838 50542435 ~ 50552525 (-)
LOC110500668 trmt44 other upstream 867106 51036609 ~ 51051426 (-)
G1750625 NA other upstream 1067288 51236885 ~ 51237163 (-)
c21h11orf68 cssa07h11orf68 other upstream 1316103 51485700 ~ 51501323 (-)

Expression


Co-expression Network