LOC110500648 (plin2)


Basic Information

Item Value
gene id LOC110500648
gene name plin2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 50497065 ~ 50502262 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578132.2
CGCGAGAAGCAGATATTATAAATACGGACGCTGTCTGTTCACTGTCAAATCAAACCTGATATAGAGTGAGTTACTATACTGCTGGGAAcataatttaccaaagttacccaACAGATTTGACATGGAGTCAGTTGAAGTCGTCAATAATCAGAATGTGGTTGAGAGGGTGGCCAGCCTCCCCTTGGTGAGCTCCACCTATGACATGGTGTCCAGTGCCTACTGCACCACCAAGGATAACCACCCCTACCTCAAGTCCATGTGTGAGGTGGCTGAGCTGGGGGTGCGAACCATCACCACTGTGGCCCTCACTGGTGCAGCGCCCATCATCGGCAAGCTGGAGCCACAAATTGCCATGGCCAATGACCTGGCTTGTAAAGGTTTGGATAAGATTGAGAAGACCTTGCCAATCCTGCACCAGCCTTCTGAGCAGATTGTTGCCAACACCAAGGATGCAGTGACCGGTGCCAAAGACGTGATGTCTGTCACCGTCACGGGGGCCAAGGACAGTGTGTCCCACACCTTGACTAGCGCGGTGGACCGGACCAGGGGCGCTGTGCAGGACAGCGTGCAGATGACCCGGGCTGCGGTCAGTGGTAGCGTAAACACGGTGATGGAGAGCCGCATGGCCCAGATGGTCAGTAGCGGAATGGAGACGGCCCTCACCACCTCTGAGCGCTTGGTGGACCAGTACCTGCCTCGCACTGAGGACGAGCTGGAAATGGAGGCTAAAACGGTGAAAGGGTTCGACGTGGCCAAGGATGCACCTAACTACTATGTTCGTCTAGGCTCTCTGTCTACCAAGCTGCGTAAGAGAGCGTACCACAAGGCCCTGGCCCAGATCAAAGACACCAAGCAGCGCAGCCAGGAGTCCATCTCACAGCTCAACCACACTGTGGACCTGATTGATTACGCCAGAAAGAATATTGACGGAGCTAACCAGAAGGTGAAAGGCAAACTGAGCTCCCTGGTCGAGTGGAAGTCTAATGAAGGAGATGGCAATGAGGCAGAGAACATAGAATCGAGGACCCTGGCGATGGCGCGCTCCCTCACTCAGCAGCTGCAGACAACGTGCCTGGCGCTAGTCTCTGGTCTGCAGGGCCTTCCACAGAACATCCAGGAGGAGGCGCTGTCCCTTAGCCACTCTGCCTCGCAAATCTACTCCAGCTTCAGCAAGGCGTCGGCGTTCGGGGACCTGTCGGATGGCGTTCTAGCCAGCAGCAAGGCCCAGCTGAACAAGATGAAGGAGTCGCTGGATGACGTCATGGACTACCTGGTGAACAACACACCCCTCAACTGGCTGGTACCAGACTTCACCTTCTCAGACTTGGCCTCGGAACCTGACCTCTCCTCAGTTGAGGATGATGGCATGTCAGATGAGTCCAACAGCAACGAACCCCTATCAGCTCCCCTTGCTCACCAATAACCTGCATTGTCAGATAAATCAAATGTCCACAGGTCATGTGTCTGTAATGCTTAGTTATACTTGAAAATAGATTTTAATATTTTTGAAATACCATTGGTAGACAATCATAGTAGTTGATTTGGCCAGTGTATTTGAAAGTACACAATGTATTTAAATATGTAGGTATTAAATACGCATGGATTTGAACAAAGGTCTGTTCTGTTGTGGAttgaaaaaatatttagtcaCTGTGAAAGTGACCACCTCTTCCGTTTTACTTCCATGTCCAATACAGTTTTGAATGGGATTCAAGATATCATAATTCATGAACGCAGTCATTTAAGATACCGTTTTTGTGGATTATCTACTGATGCCTTAGCGACAGCATTTTTAATTTTTGTACTTCTTGCACTGAAACGTTTAAAAACTACAAGGCACAGAAGGCGGCCACTTTCCCAGCGTATTTTCATGGCAGGTGTGTGAGCCTTTAAATAAACATTGCAGCTGTACAGTAACCATGGTGTCCTTAGCTGAACATAATGGAAGACAGTGGGATACAGACTAACAGGAATACAACACTCAGTTGCAGATCATTTAGGAGTCAATGTAACCTGTTGTGTTTCAATGATCAGTTCTTTATTCAGTAAAAACACTTACAAACTAAAGAAAAGCTGGGACCACTTTATTTGACATGCTGCTCATAAAGCCTTCAAGACAATGTCTAACAAATATGAGGAATAGACATTTACACAAAATCTCTACAAAAACATTGCCAGGAATCCTTCACATGTCTTCCGATCAGGTCTTaattccagacatttaatcctagtaaagattccctgtcttaggtcagttaggatcaccactttaatttaagaatgtgaaatgtcaat
>XM_021578133.2
CGCGAGAAGCAGATATTATAAATACGGACGCTGTCTGTTCACTGTCAAATCAAACCTGATATAGAGTGAGTTACTATACTGCTGGGAAcataatttaccaaagttacccaACAGATTTGACATGGAGTCAGTTGAAGTCGTCAATAATCAGAATGTGGTTGAGAGGGTGGCCAGCCTCCCCTTGGTGAGCTCCACCTATGACATGGTGTCCAGTGCCTACTGCACCACCAAGGATAACCACCCCTACCTCAAGTCCATGTGTGAGGTGGCTGAGCTGGGGGTGCGAACCATCACCACTGTGGCCCTCACTGGTGCAGCGCCCATCATCGGCAAGCTGGAGCCACAAATTGCCATGGCCAATGACCTGGCTTGTAAAGGTTTGGATAAGATTGAGAAGACCTTGCCAATCCTGCACCAGCCTTCTGAGCAGATTGTTGCCAACACCAAGGATGCAGTGACCGGTGCCAAAGACGTGATGTCTGTCACCGTCACGGGGGCCAAGGACAGTGTGTCCCACACCTTGACTAGCGCGGTGGACCGGACCAGGGGCGCTGTGCAGGACAGCGTGCAGATGACCCGGGCTGCGGTCAGTGGTAGCGTAAACACGGTGATGGAGAGCCGCATGGCCCAGATGGTCAGTAGCGGAATGGAGACGGCCCTCACCACCTCTGAGCGCTTGGTGGACCAGTACCTGCCTCGCACTGAGGACGAGCTGGAAATGGAGGCTAAAACGGTGAAAGGGTTCGACGTGGCCAAGGATGCACCTAACTACTATGTTCGTCTAGGCTCTCTGTCTACCAAGCTGCGTAAGAGAGCGTACCACAAGGCCCTGGCCCAGATCAAAGACACCAAGCAGCGCAGCCAGGAGTCCATCTCACAGCTCAACCACACTGTGGACCTGATTGATTACGCCAGAAAGAATATTGACGGAGCTAACCAGAAGGTGAAAGGCAAACTGAGCTCCCTGGTCGAGTGGAAGTCTAATGAAGGAGATGGCAATGAGGCAGAGAACATAGAATCGAGGACCCTGGCGATGGCGCGCTCCCTCACTCAGCAGCTGCAGACAACGTGCCTGGCGCTAGTCTCTGGTCTGCAGGGCCTTCCACAGAACATCCAGGAGGAGGCGCTGTCCCTTAGCCACTCTGCCTCGCAAATCTACTCCAGCTTCAGCAAGGCGTCGGCGTTCGGGGACCTGTCGGATGGCGTTCTAGCCAGCAGCAAGGCCCAGCTGAACAAGATGAAGGAGTCGCTGGATGACGTCATGGACTACCTGGTGAACAACACACCCCTCAACTGGCTGGTAGGTCCCTTTTACCCCCGGCTGGCCCCACCCCACACCGCTGCATCTTCCCCGTCCCAGAAGACACCAGCCCCCGCAGAGGTGGAGATGAAATCCATGGACTCTAAGCACTAGCTGCCTGTTTAACGACTTTCTATCATATCCCATAGTATTATTCCTTCATCAAACATCCCTGAGTCACACTAATGAGCCTGCATTTATTCAGCATGTTGATGAATAAATGTTGATATACTGTTTGACAATATTTAGGCATTCCGACTGAACGTTGCTCCACGTGTGCTCAATAATCTAGCAACATTTGCCCATGCCTTGTCTTATGCAGCACAGTGCTTTTGATACTGTTGTTTTTGACATCATTTTATATCCTGTTGTAATCATAACTTGCCATATAGTAGTTATAGACTCATGTTAGCGCATAACCATGTATGCTTTCATCTTTATACAAGTCTAATAAATGGGTTAATATA

Function

symbol description
plin2 Predicted to be involved in lipid storage and positive regulation of sequestering of triglyceride. Predicted to be active in cytosol and lipid droplet. Is expressed in digestive system. Orthologous to human PLIN2 (perilipin 2).

NR:

description
perilipin-2-like isoform X2

GO: NA

KEGG:

id description
K17284 PLIN2, ADRP; perilipin-2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578132.2 False 2295 mRNA 0.48 9 50497065 50502262
XM_021578133.2 True 1767 mRNA 0.52 8 50498356 50502262

Neighbor

gene id symbol gene type direction distance location
LOC110500644 fa29a coding downstream 14293 50476029 ~ 50482772 (-)
LOC118943015 NA coding downstream 18328 50478607 ~ 50478737 (-)
LOC110500643 LOC106608644 coding downstream 24889 50413056 ~ 50472176 (-)
LOC110500881 LOC106608643 coding downstream 107611 50356174 ~ 50389454 (-)
LOC118942943 NA coding downstream 108004 50385962 ~ 50389061 (-)
larp7 larp7 coding upstream 6235 50508497 ~ 50518222 (-)
si:ch73-269m23.5 LOC106608694 coding upstream 28837 50531099 ~ 50533879 (-)
LOC110500654 LOC106608650 coding upstream 31743 50534005 ~ 50542563 (-)
LOC110500655 LOC106608652 coding upstream 40342 50542604 ~ 50552598 (-)
LOC110500944 NA coding upstream 449770 50952032 ~ 50978597 (-)
G1749098 NA non-coding downstream 45707 50449549 ~ 50451358 (-)
G1749064 NA non-coding downstream 92706 50360285 ~ 50404359 (-)
G1749013 NA non-coding downstream 141355 50353893 ~ 50355710 (-)
LOC110500880 LOC106608636 non-coding downstream 210723 50272053 ~ 50288270 (-)
G1749004 NA non-coding downstream 225875 50270980 ~ 50271190 (-)
G1749149 NA non-coding upstream 84169 50586431 ~ 50586636 (-)
G1749154 LOC106608695 non-coding upstream 89301 50591563 ~ 50598287 (-)
G1749168 NA non-coding upstream 115065 50617327 ~ 50617528 (-)
G1749178 NA non-coding upstream 130740 50633002 ~ 50633320 (-)
G1749180 NA non-coding upstream 136098 50638360 ~ 50638869 (-)
G1747934 NA other downstream 908277 49587696 ~ 49588788 (-)
G1747906 LOC106608620 other downstream 911887 49459688 ~ 49585178 (-)
G1747908 LOC106608618 other downstream 982901 49512069 ~ 49514164 (-)
LOC110500619 LOC106608618 other downstream 995138 49493629 ~ 49502064 (-)
LOC110500878 LOC102779023 other downstream 1072735 49392218 ~ 49424330 (-)
G1749122 LOC106608652 other upstream 40173 50542435 ~ 50552525 (-)
LOC110500668 trmt44 other upstream 534441 51036609 ~ 51051426 (-)
G1750625 NA other upstream 734623 51236885 ~ 51237163 (-)
c21h11orf68 cssa07h11orf68 other upstream 983438 51485700 ~ 51501323 (-)

Expression


Co-expression Network