larp7 (larp7)


Basic Information

Item Value
gene id larp7
gene name larp7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 50508497 ~ 50518222 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578134.2
tcacaatttacccaggACACATAATGGTTTTGATCCTCTCGAACACGTATTTTTGTATTTCGCTCCTTTTTTCGTATTCCCGTGGGGGAAACGTCATCAACAAGAGACAAAATAGGTTTCCAAAGGAAAGCCTTTTTAGAGAAATACAGACCATCTAATTTAGCTTTTGGTACTATTACCTGTGTTTAACGCATTTCCTCTGATATGTATAATCACATTTGTAATTTGGGTATACTAATTTGCTAAATTATAGTGTGTTAACTAATTAATTATTCGTCAAGAAAGGTTGAGCGACTCAACTGTTTCTCAACTGTGCGAGGACCTCACTGGAAAACGAAACATACACGCCAGTGTCTCTGAATTctaaaatatagctagctaaatGATTATTTATTGCCGCAGATAATAAGGTGTAGTTAAACACATAATGGTAGACACAGAGGAAAGAGTCgtaggtggtggtggtgcccTATCATCTACCATGAACCCAGGTGGAAAGAACAAAGAgaatgagaagaagaagaggtcCCGTGTGAAGCAGCTGCTTGCAGACGTGAAGAAGCAGGTGGACTTCTGGTTTGGGGATGTCAACCTTCACAAGGACAGGTTTCTAAGACGACTCATTGAGGAGTCACGAGATGGATATGTTGATATATCTGTTTTGACGTCCTTCAACCGAATGAAAAATCTGACAACTGATTGCAAATTGATTGCAAGGGCAATTAAAAATTCATCTGTCGTTGAGGTCAACCTAGAGGGAACTAAAGTTCGACGGCAGCGTCCAATTGGAGAGGATCCGAAAGATGTAGACAACCGAACAGTCTATGTGGAGCTTCTGCCCAAGAAAGTAACACACGACTGGCTAGAACGAGTGTTTACCAAATGTGGAAATGTGGTTTACGTCAGTGTACCGAGATACAAAACCACGGGCCACTCCAAAGGGTTCGCCTTCATTGAGTTTGAGACGGAAGAGGAGGCACAGAAAGCCATAGAGATGCTGAACAACCCTCCAGAGGACGCCCCCAGGAAACCTGGCATCTTCCCTAAGACCAAGAACAGGAAGCCTATCCCCGATCCTCCCACCCTGAACACCACACTAGACGAGGAAGAGGAAAAGaaaaggaggaagaagaagaagtccCGGGGCAGCACCAAAGAGGACACCCCGTCACAGGCTGAGACGACAGTGGGCGGGGCCAAAGAACAAGAAATAGAATCTGAGTCTAAGCCCTCTGACAGGAAGAGGAAATGCACTGCCGAGGGTGCAGAGGTTGTAGCACCTGAGGGGGGCACAGATAAGGCCCCTGCCAAAAGGCTAGAGAAGAAGAGACGCCGGTCCCAGGCAGGGGAAAGCTCAGAGAGTGACGTCCAGGGAGACATGCCCGCTAAGCTGAGAAGGATGAGCGAGGGGGAGGAGGGcaaggtgaaggaggaagacaaGGTGAAGGAGAGCGATGGGAAAGATTTGCCTGTCAAggttgaggaggaagaggaggagaagatggacGACTCCCTTCTAAAAGctaagaggaagaggaagaagaagcacAAGGAGAGGGCGAAGATTGGTGAAGAGGTCATTCCTCTCCGTGTTCTCTCCAAGAAAGACTGGCTGAAGTTGAAGGTGGAGTATCTGACCCTGCAGAAGAGGAGCATGGGAGCTCTGAAGGCATGCCTGACCAAGTTCCACCACAAGGGGGCAGGAGCAGGAGAGAAAATGGAGATGGACACCAGTCTCCAACAGAAACAGACATCTCCTGAGGAGAGTAAGAAAGCAGGTGAAAAGGAGAGCCCCCTTGGCCCTCAGTTTGAGAGTGGCTGCATCGTCAGgatcacccacaccacacccttacCTGGCAGAAAAGTCATCAAGGACGCTCTCTCTGAGGTGTCCCCAGtggtgtatgtggacaccctagAGGGGGACGCCGAGGGTCACGTCCGCTTCAAGACTCCAGCAGAGGCCAAGGCCATCATTGACGCTCGCACCGAGCTGCAGCACAAACACAGCTGGCAGCTGGAGATCCTTTCTGGCGACCATGAACAAAGGTACTGGCAGAAGATCCTGGTGGACCGCCAAGCTAAGTTGAACCGGCCCAGAGACAAGAAACGGGGCACAGAGAAGCTCATTTCCAAAGCCGAGAAAATCATCATAGCCCGGGCCAAGGAGGCCACTAAGCACATCCGCTTCATGGAAGACTGATCAAGACTGTCAAGTTCTACTGTGCGTCCTTTCTTTTCTGAATCCTTTTCTTCCCTAAGAGTTTATTTAAATGTCGGCCATTTTGTCATTCCTAAATAGTTTGATGTTTTTGTTTTACTGTTCATGAGTGGTACAAGCAGAGAAGCCATGGTTTTAAAATTGAATTTTAATAAGTCATGGTAAcgttgtgtttattttttaaacagcCATTCTGTCCAATGTAGTTTCAGTTCCACTAACTGGAAGGTTATATATGTTCTACAAGCAGAAAGCAGCTGCATTATTTAAATTGCGAATAGGTTCGCTCACTAGTCTTCTTTTATTGTGTTGTAGTGAGAGCTGCCCAGATTTCAGTTATGAAATATGAATGTAAATATGCTGTACATAGGATTTCAAAACTTGCTCAGAGCTTCGCCCAAGATCTGTTTTCTGTAATTTGTCATGGCACCGATGAACTTTTCTTTTTGAAGTAATGTACCTATTTTCTAATTAATAAACATACATTTTGGTGGTTAAAGGCCcagtgaagtaaaaaaaaaaaaaaaaaa

Function

symbol description
larp7 Predicted to enable 7SK snRNA binding activity and U6 snRNA binding activity. Acts upstream of or within cardiac muscle tissue regeneration and regulation of cardiac muscle cell proliferation. Predicted to be located in nucleus. Predicted to be part of ribonucleoprotein complex. Is expressed in blastoderm cell and brain. Orthologous to human LARP7 (La ribonucleoprotein 7, transcriptional regulator).

NR:

description
la-related protein 7

GO: NA

KEGG:

id description
K15191 LARP7; La-related protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578134.2 True 2751 mRNA 0.46 13 50508497 50518222

Neighbor

gene id symbol gene type direction distance location
LOC110500648 plin2 coding downstream 6235 50497065 ~ 50502262 (-)
LOC110500644 fa29a coding downstream 25725 50476029 ~ 50482772 (-)
LOC118943015 NA coding downstream 29760 50478607 ~ 50478737 (-)
LOC110500643 LOC106608644 coding downstream 36321 50413056 ~ 50472176 (-)
LOC110500881 LOC106608643 coding downstream 119043 50356174 ~ 50389454 (-)
si:ch73-269m23.5 LOC106608694 coding upstream 12877 50531099 ~ 50533879 (-)
LOC110500654 LOC106608650 coding upstream 15783 50534005 ~ 50542563 (-)
LOC110500655 LOC106608652 coding upstream 24382 50542604 ~ 50552598 (-)
LOC110500944 NA coding upstream 433810 50952032 ~ 50978597 (-)
LOC110500666 LOC106608661 coding upstream 464024 50982246 ~ 50992851 (-)
G1749098 NA non-coding downstream 57139 50449549 ~ 50451358 (-)
G1749064 NA non-coding downstream 104138 50360285 ~ 50404359 (-)
G1749013 NA non-coding downstream 152787 50353893 ~ 50355710 (-)
LOC110500880 LOC106608636 non-coding downstream 222155 50272053 ~ 50288270 (-)
G1749004 NA non-coding downstream 237307 50270980 ~ 50271190 (-)
G1749149 NA non-coding upstream 68209 50586431 ~ 50586636 (-)
G1749154 LOC106608695 non-coding upstream 73341 50591563 ~ 50598287 (-)
G1749168 NA non-coding upstream 99105 50617327 ~ 50617528 (-)
G1749178 NA non-coding upstream 114780 50633002 ~ 50633320 (-)
G1749180 NA non-coding upstream 120138 50638360 ~ 50638869 (-)
G1747934 NA other downstream 919709 49587696 ~ 49588788 (-)
G1747906 LOC106608620 other downstream 923319 49459688 ~ 49585178 (-)
G1747908 LOC106608618 other downstream 994333 49512069 ~ 49514164 (-)
LOC110500619 LOC106608618 other downstream 1006570 49493629 ~ 49502064 (-)
LOC110500878 LOC102779023 other downstream 1084167 49392218 ~ 49424330 (-)
G1749122 LOC106608652 other upstream 24213 50542435 ~ 50552525 (-)
LOC110500668 trmt44 other upstream 518481 51036609 ~ 51051426 (-)
G1750625 NA other upstream 718663 51236885 ~ 51237163 (-)
c21h11orf68 cssa07h11orf68 other upstream 967478 51485700 ~ 51501323 (-)

Expression


Co-expression Network