XLOC_036318


Basic Information

Item Value
gene id XLOC_036318
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 16566548 ~ 16584612 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072413
TGGAACTCTACAAATttacatttgcatatatttttaagGTCTGTGAGTGTGTAAGCATTCAAGTATAACAATTCATTATGTTTGTAACTTGTAGAAAGATTAATGAACTGTATAGaggtttattttacatttgatcattTAATTCATGTGCCTGAATACCTCCTAgactgtttacttttattttttactactgTTTTTAGCAATGCTTATGaatggtttattatattttacgcaGATGTACTGGCCTTCTTCTCTTTtctatttctattctattctttctAAATAGAGCCATTCAAGTCATTCATAGAGCCATTGAAATTAtgctcaatattgcaatgtgtatcgcagaaaaataaaatatcgatatgtctatttttttccaatatcgtgcagccctatt

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0042773 ATP synthesis coupled electron transport biological_process
GO:0042775 mitochondrial ATP synthesis coupled electron transport biological_process
GO:0006119 oxidative phosphorylation biological_process
GO:0007275 multicellular organism development biological_process
GO:0022900 electron transport chain biological_process
GO:0022904 respiratory electron transport chain biological_process
GO:0048856 anatomical structure development biological_process
GO:0015980 energy derivation by oxidation of organic compounds biological_process
GO:0032502 developmental process biological_process
GO:0045333 cellular respiration biological_process
GO:0098803 respiratory chain complex cellular_component
GO:0005746 mitochondrial respirasome cellular_component
GO:0044455 obsolete mitochondrial membrane part cellular_component
GO:0031012 extracellular matrix cellular_component
GO:0098800 inner mitochondrial membrane protein complex cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072413 True 400 lncRNA 0.29 2 16566548 16584612

Neighbor

gene id symbol gene type direction distance location
XLOC_036317 CU467861.7 coding downstream 69 16565837 ~ 16566479 (-)
XLOC_036316 ttc39a coding downstream 7307 16470358 ~ 16559241 (-)
XLOC_036315 rnf11b coding downstream 102095 16424722 ~ 16464453 (-)
XLOC_036314 faf1 coding downstream 160108 16274778 ~ 16406440 (-)
XLOC_036313 NA coding downstream 297601 16263930 ~ 16268947 (-)
XLOC_036321 tor3a coding upstream 12527 16597139 ~ 16609004 (-)
XLOC_036322 NA coding upstream 25010 16609622 ~ 16613663 (-)
XLOC_036323 CU467861.2 coding upstream 27323 16611935 ~ 16612017 (-)
XLOC_036324 osbpl9 coding upstream 31186 16615798 ~ 16675464 (-)
XLOC_036325 rpe65b coding upstream 103758 16688370 ~ 16697912 (-)
XLOC_036311 NA non-coding downstream 311887 16218254 ~ 16254661 (-)
XLOC_036310 CR931780.1 non-coding downstream 502138 16062172 ~ 16064410 (-)
XLOC_036309 CR931780.2 non-coding downstream 650221 15916210 ~ 15916327 (-)
XLOC_036332 BX465215.1 non-coding upstream 667627 17252239 ~ 17252354 (-)
XLOC_036335 NA non-coding upstream 1074985 17659597 ~ 17661194 (-)
XLOC_036336 NA non-coding upstream 1193248 17777860 ~ 17784911 (-)

Expression


Co-expression Network