c21h11orf68 (cssa07h11orf68)


Basic Information

Item Value
gene id c21h11orf68
gene name cssa07h11orf68
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 51485700 ~ 51501323 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578197.2
GCACTATATTGGATCACTCCAGTGTGGTATTATTTCGTGCGGCAGGATACAGTCCGAGTAAGATGCTTCAGTCCAAACACATAAAAGACACCAACTGGCTGAATTCCAAACACACACCTTCCCCcgtcagccctcaaattaagtgcaCACTTATGATAACATGAGGCATGATGAGTtgacacttgcagggcaaggTGCGCTGGCAGAGGGAATTCATTTTAAATGGTCGACCTTGGCCTAAAGTTAGTCCCACGGATGTTTTCATTCATCATGGAACCACCGGTAGCTGTGTGTGCTTTCATATGCGCTCAGTCCATTTTGATTGTATTTCATGTCATGGCTAGATGACAAACCATCCGCAGACATCGAATACTAGCCATCCGACGATATCGGGCCCTGAAGTGAACAGAATCTTACACTATCACAAACGAGGACTGAGTTgccaacttcccttgcttggctaattgtTAGGACCGGTGGAAAAGATTGCACGAGGATTCCCACAAGGGAGAATTGTGCACCCATTTGACCATTGCTGAGAACCCATCCCAGGAACCCCTTATTGAGATTCCACCATGGAGGATGTTCAGGTGGAGGAAGATGTCCCAAAGGAGGGGGCAGAGGTGGAGAACCCAGAGCCATTATCTGCAGAGAGCTATGCAGCAGAGTCCATGGCTGCAGACATGGACCCCTGGATCATATTTGACTCTCGCAAAACGCCTGCAGCTGAGTTTGACGGCTGGCTGGAGACCAACAGGCCATCCCAGGTGGGGCGCTTTGGGGACGAGGAGGGTGGTAAGGGACCTGTGGGGTGGATTGCTGTGTTGGGCCCGGACCACTGCCCTGCCACAGGGGACATCACTGGACTCCAGGCGAGCTGGGAGAGGCTGCTGACCAGCGGGAGAACCATCACCTTCCAGACGGTGAAGGAACTGGCACTGAACCACGGGGTGCTCACCGGCAAGTGGCTGATGCACCTGGACTCAGGCTTCAAGGTGGACCATGCCTGGGAGTGTGTGGCCAGAGCAGCCCTGGAAGGGAAGATCTTCCAGACCAAAGTGAGCCCGCGCGACCCCAAGTCTGACCGTAAGCACGTCATCTGTTCCTATAACAAGGACTTCACAGACGAGAACGAGGTGATGAGGCTGGATGCAGTCATCCGGGCCACGGGGGTCAAGTGCTCGCTGTCCTTCAAGCCGGATGTTTACACTTACCTGGGTATTTATCGCAACAACCGCTGGAATCTCTGCCCCACAATCTACGAGAGCAAGTACGACCTGGAGTGTGTGCCCCGACGTTCCCACATCGTCAACAAAGTCACCAATCTGGAGGTCACCTAGGAAAGGAGTGTGGGAGGATAGTTTGCTATTGCTAAACAAGCACTTAGCCTGACTCATGGCATGTGTCCAACACTatgttgtacagtactgtacttCTGACTTGGGTTCAGTTAATTCCCCGAAGTATGGGGTTTAATATTTCTGAGTCCTTCCTATACATCTCAAAGCAGACTTGTTCATCGTGCTGAAATTAATTTCAGATAATTTCTTGCCATAGTTCATTAGTGTGCTTCAAGATTCAGATTATATTGTTTACATACAAGCAAAAATGTTTTACTACTTCAACAAAAATGTTGTAAATCAAGTCTTTAATCTACTTATTTGGTAGTGCGGCTGCCATCCACAACTCTGAAACTAGAGCTTGCCACTGGTCATGCAGTGACtgaatacatgcatgttttgttgtgATTCTGTACATTTAACATTTACAAAGATGTCAAGGTATCTGTAATAAAAATGTCTTACCACTTTCA
>XM_036958140.1
CTACCCCACAATATCCGGAGACGGCCCTGAAGTGAACAGAATCTTACACTATCACAAACGAGGACTGAGTTgccaacttcccttgcttggctaattgtTAGGACCGGTGGAAAAGATTGCACGAGGATTCCCACAAGGGAGAATTGTGCACCCATTTGACCATTGCTGAGAACCCATCCCAGGAACCCCTTATTGAGATTCCACCATGGAGGATGTTCAGGTGGAGGAAGATGTCCCAAAGGAGGGGGCAGAGGTGGAGAACCCAGAGCCATTATCTGCAGAGAGCTATGCAGCAGAGTCCATGGCTGCAGACATGGACCCCTGGATCATATTTGACTCTCGCAAAACGCCTGCAGCTGAGTTTGACGGCTGGCTGGAGACCAACAGGCCATCCCAGGTGGGGCGCTTTGGGGACGAGGAGGGTGGTAAGGGACCTGTGGGGTGGATTGCTGTGTTGGGCCCGGACCACTGCCCTGCCACAGGGGACATCACTGGACTCCAGGCGAGCTGGGAGAGGCTGCTGACCAGCGGGAGAACCATCACCTTCCAGACGGTGAAGGAACTGGCACTGAACCACGGGGTGCTCACCGGCAAGTGGCTGATGCACCTGGACTCAGGCTTCAAGGTGGACCATGCCTGGGAGTGTGTGGCCAGAGCAGCCCTGGAAGGGAAGATCTTCCAGACCAAAGTGAGCCCGCGCGACCCCAAGTCTGACCGTAAGCACGTCATCTGTTCCTATAACAAGGACTTCACAGACGAGAACGAGGTGATGAGGCTGGATGCAGTCATCCGGGCCACGGGGGTCAAGTGCTCGCTGTCCTTCAAGCCGGATGTTTACACTTACCTGGGTATTTATCGCAACAACCGCTGGAATCTCTGCCCCACAATCTACGAGAGCAAGTACGACCTGGAGTGTGTGCCCCGACGTTCCCACATCGTCAACAAAGTCACCAATCTGGAGGTCACCTAGGAAAGGAGTGTGGGAGGATAGTTTGCTATTGCTAAACAAGCACTTAGCCTGACTCATGGCATGTGTCCAACACTatgttgtacagtactgtacttCTGACTTGGGTTCAGTTAATTCCCCGAAGTATGGGGTTTAATATTTCTGAGTCCTTCCTATACATCTCAAAGCAGACTTGTTCATCGTGCTGAAATTAATTTCAGATAATTTCTTGCCATAGTTCATTAGTGTGCTTCAAGATTCAGATTATATTGTTTACATACAAGCAAAAATGTTTTACTACTTCAACAAAAATGTTGTAAATCAAGTCTTTAATCTACTTATTTGGTAGTGCGGCTGCCATCCACAACTCTGAAACTAGAGCTTGCCACTGGTCATGCAGTGACtgaatacatgcatgttttgttgtgATTCTGTACATTTAACATTTACAAAGATGTCAAGGTATCTGTAATAAAAATGTCTTACCACTTTCA
>XM_021578198.2
GCACTACTTCCATCTCTTCATTTTCTCGTCTCATTCCAGCGAGGATTCGTTTGGAGAATTGTGCACCCATTTGACCATTGCTGAGAACCCATCCCAGGAACCCCTTATTGAGATTCCACCATGGAGGATGTTCAGGTGGAGGAAGATGTCCCAAAGGAGGGGGCAGAGGTGGAGAACCCAGAGCCATTATCTGCAGAGAGCTATGCAGCAGAGTCCATGGCTGCAGACATGGACCCCTGGATCATATTTGACTCTCGCAAAACGCCTGCAGCTGAGTTTGACGGCTGGCTGGAGACCAACAGGCCATCCCAGGTGGGGCGCTTTGGGGACGAGGAGGGTGGTAAGGGACCTGTGGGGTGGATTGCTGTGTTGGGCCCGGACCACTGCCCTGCCACAGGGGACATCACTGGACTCCAGGCGAGCTGGGAGAGGCTGCTGACCAGCGGGAGAACCATCACCTTCCAGACGGTGAAGGAACTGGCACTGAACCACGGGGTGCTCACCGGCAAGTGGCTGATGCACCTGGACTCAGGCTTCAAGGTGGACCATGCCTGGGAGTGTGTGGCCAGAGCAGCCCTGGAAGGGAAGATCTTCCAGACCAAAGTGAGCCCGCGCGACCCCAAGTCTGACCGTAAGCACGTCATCTGTTCCTATAACAAGGACTTCACAGACGAGAACGAGGTGATGAGGCTGGATGCAGTCATCCGGGCCACGGGGGTCAAGTGCTCGCTGTCCTTCAAGCCGGATGTTTACACTTACCTGGGTATTTATCGCAACAACCGCTGGAATCTCTGCCCCACAATCTACGAGAGCAAGTACGACCTGGAGTGTGTGCCCCGACGTTCCCACATCGTCAACAAAGTCACCAATCTGGAGGTCACCTAGGAAAGGAGTGTGGGAGGATAGTTTGCTATTGCTAAACAAGCACTTAGCCTGACTCATGGCATGTGTCCAACACTatgttgtacagtactgtacttCTGACTTGGGTTCAGTTAATTCCCCGAAGTATGGGGTTTAATATTTCTGAGTCCTTCCTATACATCTCAAAGCAGACTTGTTCATCGTGCTGAAATTAATTTCAGATAATTTCTTGCCATAGTTCATTAGTGTGCTTCAAGATTCAGATTATATTGTTTACATACAAGCAAAAATGTTTTACTACTTCAACAAAAATGTTGTAAATCAAGTCTTTAATCTACTTATTTGGTAGTGCGGCTGCCATCCACAACTCTGAAACTAGAGCTTGCCACTGGTCATGCAGTGACtgaatacatgcatgttttgttgtgATTCTGTACATTTAACATTTACAAAGATGTCAAGGTATCTGTAATAAAAATGTCTTACCACTTTCA
>XM_021578196.2
CAGGATACACCCCGAGTAAGAATTTCCGATTAGTCTGCTGTACCGGGTAGTGCTGCGGCTGACACCCTTAAATAACTGTCGGCGCACTACTTCCATCTCTTCATTTTCTCGTCTCATTCCAGCGAGGATTCGTTTGGCCCTGAAGTGAACAGAATCTTACACTATCACAAACGAGGACTGAGTTgccaacttcccttgcttggctaattgtTAGGACCGGTGGAAAAGATTGCACGAGGATTCCCACAAGGGAGAATTGTGCACCCATTTGACCATTGCTGAGAACCCATCCCAGGAACCCCTTATTGAGATTCCACCATGGAGGATGTTCAGGTGGAGGAAGATGTCCCAAAGGAGGGGGCAGAGGTGGAGAACCCAGAGCCATTATCTGCAGAGAGCTATGCAGCAGAGTCCATGGCTGCAGACATGGACCCCTGGATCATATTTGACTCTCGCAAAACGCCTGCAGCTGAGTTTGACGGCTGGCTGGAGACCAACAGGCCATCCCAGGTGGGGCGCTTTGGGGACGAGGAGGGTGGTAAGGGACCTGTGGGGTGGATTGCTGTGTTGGGCCCGGACCACTGCCCTGCCACAGGGGACATCACTGGACTCCAGGCGAGCTGGGAGAGGCTGCTGACCAGCGGGAGAACCATCACCTTCCAGACGGTGAAGGAACTGGCACTGAACCACGGGGTGCTCACCGGCAAGTGGCTGATGCACCTGGACTCAGGCTTCAAGGTGGACCATGCCTGGGAGTGTGTGGCCAGAGCAGCCCTGGAAGGGAAGATCTTCCAGACCAAAGTGAGCCCGCGCGACCCCAAGTCTGACCGTAAGCACGTCATCTGTTCCTATAACAAGGACTTCACAGACGAGAACGAGGTGATGAGGCTGGATGCAGTCATCCGGGCCACGGGGGTCAAGTGCTCGCTGTCCTTCAAGCCGGATGTTTACACTTACCTGGGTATTTATCGCAACAACCGCTGGAATCTCTGCCCCACAATCTACGAGAGCAAGTACGACCTGGAGTGTGTGCCCCGACGTTCCCACATCGTCAACAAAGTCACCAATCTGGAGGTCACCTAGGAAAGGAGTGTGGGAGGATAGTTTGCTATTGCTAAACAAGCACTTAGCCTGACTCATGGCATGTGTCCAACACTatgttgtacagtactgtacttCTGACTTGGGTTCAGTTAATTCCCCGAAGTATGGGGTTTAATATTTCTGAGTCCTTCCTATACATCTCAAAGCAGACTTGTTCATCGTGCTGAAATTAATTTCAGATAATTTCTTGCCATAGTTCATTAGTGTGCTTCAAGATTCAGATTATATTGTTTACATACAAGCAAAAATGTTTTACTACTTCAACAAAAATGTTGTAAATCAAGTCTTTAATCTACTTATTTGGTAGTGCGGCTGCCATCCACAACTCTGAAACTAGAGCTTGCCACTGGTCATGCAGTGACtgaatacatgcatgttttgttgtgATTCTGTACATTTAACATTTACAAAGATGTCAAGGTATCTGTAATAAAAATGTCTTACCACTTTCA
>TU2004532
GTCTCATTCCAGCGAGGATTCGTTTGAATTGTGCACCCATTTGACCATTGCTGAGAACCCATCCCAGGAACCCCTTATTGAGATTCCACCATGGAGGATGTTCAGGTGGAGGAAGATGTCCCAAAGGAGGGGGCAGAGGTGGAGAACCCAGAGCCATTATCTGCAGAGAGCTATGCAGCAGAGTCCATGGCTGCAGACATGGACCCCTGGATCATATTTGACTCTCGCAAAACGCCTGCAGCTGAGTTTGACGGCTGGCTGGAGACCAACAGGCCAGGGACATCACTGGACTCCAGGCGAGCTGGGAGAGGCTGCTGACCAGCGGGAGAACCATCACCTTCCAGACGGTGAAGGAACTGGCACTGAACCACGGGGTGCTCACCGGCAAGTGGCTGATGCACCTGGACTCAGGCTTCAAGGTGGACCATGCCTGGGAGTGTGTGGCCAGAGCAGCCCTGGAAGGGAAGATCTTCCAGACCAAAGTGAGCCCGCGCGACCCCAAGTCTGACCGTAAGCACGTCATCTGTTCCTATAACAAGGACTTCACAGACGAGAACGAGGTGATGAGGCTGGATGCAGTCATCCGGGCCACGGGGGTCAAGTGCTCGCTGTCCTTCAAGCCGGATGTTTACACTTACCTGGGTATTTATCGCAACAACCGCTGGAATCTCTGCCCCACAATCTACGAGAGCAAGTACGACCTGGAGTGTGTGCCCCGACGTTCCCACATCGTCAACAAAGTCACCAATCTGGAGGTCACCTAGGAAAGGAGTGTGGGAGGATAGTTTGCTATTGCTAAACAAGCACTTAGCCTGACTCATGGCATGTGTCCAACACTatgttgtacagtactgtacttCTGACTTGGGTTCAGTTAATTCCCCGAAGACTAGAGCTTGCCACTGGTCATGCAGTGACtgaatacatgcatgttttgttgtgATTCTGTACATTTAACATTTACAAAGATGTCAAGGTATCTGTAATAAAAATGTCTTACCACTTTCATTGTTTG

Function

NR:

description
UPF0696 protein C11orf68 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578197.2 False 1813 mRNA 0.49 3 51485707 51500818
XM_036958140.1 False 1443 mRNA 0.50 3 51485707 51500936
XM_021578198.2 False 1358 mRNA 0.50 2 51485707 51501240
XM_021578196.2 False 1556 mRNA 0.50 3 51485707 51501323
TU2004532 True 1015 TUCP 0.52 4 51485700 51501213

Neighbor

gene id symbol gene type direction distance location
LOC110500690 LOC105020693 coding downstream 35219 51413375 ~ 51450488 (-)
LOC110500688 LOC106608682 coding downstream 134882 51342562 ~ 51350825 (-)
LOC110500684 LOC106608676 coding downstream 187164 51274377 ~ 51298543 (-)
LOC110500683 LOC106608675 coding downstream 212836 51257437 ~ 51272871 (-)
LOC110500682 LOC106608697 coding downstream 231931 51241917 ~ 51253776 (-)
LOC110500696 LOC106608688 coding upstream 69076 51570399 ~ 52641232 (-)
LOC118942944 NA coding upstream 253718 51755041 ~ 51757488 (-)
LOC118943018 NA coding upstream 359679 51861002 ~ 51861125 (-)
trnaa-ugc-151 NA coding upstream 1382946 52884269 ~ 52884342 (-)
LOC110500698 rasgrp2 coding upstream 1387497 52888820 ~ 52954174 (-)
G1750665 NA non-coding downstream 119094 51366258 ~ 51366613 (-)
G1750664 NA non-coding downstream 120064 51365388 ~ 51365643 (-)
G1750657 NA non-coding downstream 121519 51361813 ~ 51364188 (-)
G1750658 NA non-coding downstream 124813 51358934 ~ 51360894 (-)
G1750663 NA non-coding downstream 129393 51355543 ~ 51356314 (-)
G1750773 NA non-coding upstream 48728 51550051 ~ 51554823 (-)
G1750776 NA non-coding upstream 54066 51555389 ~ 51555588 (-)
G1750777 NA non-coding upstream 54293 51555616 ~ 51555843 (-)
G1750778 NA non-coding upstream 54592 51555915 ~ 51556175 (-)
G1750824 NA non-coding upstream 115107 51616430 ~ 51616767 (-)
G1750625 NA other downstream 248544 51236885 ~ 51237163 (-)
LOC110500668 trmt44 other downstream 436619 51036609 ~ 51051426 (-)
G1749122 LOC106608652 other downstream 933182 50542435 ~ 50552525 (-)
LOC110500654 LOC106608650 other downstream 944012 50534005 ~ 50542563 (-)
G1747934 NA other downstream 1896919 49587696 ~ 49588788 (-)
G1751128 NA other upstream 626675 52127998 ~ 52128318 (-)
LOC110500888 peli3 other upstream 1873346 53370137 ~ 53405755 (-)
G1752268 NA other upstream 1917077 53418400 ~ 53419325 (-)
G1752321 LOC103370121 other upstream 2001596 53502919 ~ 53505011 (-)
G1753637 NA other upstream 2530259 54031582 ~ 54032306 (-)

Expression


Co-expression Network