si:dkey-106g10.7 (LOC106608588)


Basic Information

Item Value
gene id si:dkey-106g10.7
gene name LOC106608588
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 53140733 ~ 53148064 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578231.2
CTTAAGGAGCCCCAGGGGCCCCAAGCTCGGCTCCCCACCCTAAAGACAAGCAGAGCCTTAAAATACAAACAAGAGGCCGCTATAGCTCATCATGGACGGGAGAGTCTCACACCCGAAGAAGGATATAAAACCGACCAAATATCGTGGCGATATATGAAAAGTTAACTTTGCTCCAGGTTGAGTGTGTGGGGGGACGAGGGGCACCCAAAAAGCGATGTGTCCGTTCGTGGTCTAGATAGCTTGCAAAACGCGTGCTGAACGATTCTCTAAAAATACAGTTCCTACCTGGTCTATCAGAGCGAATTGAAAACATTAGTAAATAGTGTAACGTTGCAGAGTAATGGAAGAGAAAGAGACCGGGGAGAGCGAGCCTGTGGTCCTTCCGTGTGCTGAGCAGGCAGATTCTCTCTCATTAATAATAAGCGGAGACGAGGAAGCGACGCAAGAGCAAAGTGACTTGGGACACTGTTCAGGAGAGAAGGACGGTCTGACCAATGGCCAGGTGGGCGATGATGACGAGGAAGAGATGGTGACCCCCCTTTGGTCCCCGGGCACCAGCTACTGGAGTGTCACCGAGGGTCCGGACTCCCCCTTCCTCCTTTCTCCCATCCCGGGCCCCTCTGGACGCAAAGAGAAGGTCCAATGCGCCTCCCGACCTGGCCTCAGCCGCATCCCGGGCAGGGATCATCGTCGCTATTACCACGAGTACTGGCGCAGCGAGTTCCTGATGGACTTTGACCCCCGTCGCCATGGCATGATCTGCATGGTGTGTGGGAGCTCGCTGGCCACGCTCAAACTCAGTACCATCAAGAGGCATATTAGACAGAAGCACCCGGACTCTCTGCTGTGGAGCGCGGCCGACAAGGAGGTGATCCGCTCGGGCTGGGAAAGTCACCTGAGTCTGGAGGGGGGCCAGAGGCTGTACTGTCCGGCCGGAGGGGTGGCCGCCATCTcccagggacaggaggaggagctgCTGGACTGTGCTCGCCACTCCACCGGAAAACCTGGTGGTATGGTGTCCCCCAAACTCCAGCCCCGGTCTCCGACCCCATCACCCCCTCCCTCAGTCCCCCTCCAGCAGGAAGAGCTCCCCGGGCCCTCTGCCAAGACCCTAGAGCGCTACCTGAACGACTCGCTCCACGCCTGGTTCCGACAGGAGTTCCTCATGGAGTACCAGGCGGAGGAAGGCAGGCTGGTGTGCATGGTGTGCGGCCGCCCGCTGCCCTCGCTCCACCTGGACCACATCAAGAGCCACGTGCTTGACATCCACCCCCAGTCGCTGGTCTACAGCTCGGAGGAGAAGCACTGCATCCTGCAGACTTGGGCCCAGACACATGAATCCGACCCTCTAAACGACTTCATCAAATCTGAGCCCAACACCAAAGACGAGAGAGATGCTGGGGTGGACTTCTCTGAAGACCTGGAGACCATCCAGATCGGCTCAGACACGTATGCAGAGGACAACGATGAGGCCTTATCCGAGATACAGGACATGGTTGATGGCGTTGATGGAGCTCCAGGGATGACCTCTCCcataccccctctccctctccaccaacCCAGGAAGAGGCGTCTCCGTGGGGGCTTCCCCTGGCGGCTGCGCCTGGACTACATGGTGGCCTACGGACCCCAGGGTCGTGGCACCTTCTGCATGGTGTGCTCCCAGGCCCTGCCCATGGCCAAGGTGAGCAGCTTCCGCCGACACATCCAGGAATGCCACCCTGAGACCACCAGCCTGGCCCGGGAGGAGAGGGATGCCATGGCCGAGGCCTGGACCAAAGAGGCTCCCATGGAAGACAACCCTGCCGTGCAGATGAAAGAAGAAGTGGACCCCAGTGACATTGTCATTCTCCCTGTGGCGAGAGAGATggccgacaacaacaacaaccggaCCACCAAGATGGCCACCACCAAGGCCGTAAAGAAGGAGGAGGGGGTCACCACCATGCCTGCCACTCCGGGGCGCCACGGCCACTACCCGGGCAAGGACCAGCGCCGGAACTACCAGGTGCGCTGGAGGATGGAGTTTCTGATGGACTATGACTGCCGGAGACACGGGTTGATCTGTATGGTGTGCGGGGCAACGTTAGCCACTCTCAAAGTCAGCACCATCAAGAGACACATTCAACAGGTTCACCCTCATTCTCTGGTGTATGTCCCCGACGAGAGACAGCAGGCCCTGCTCAGCTACAACCAGACTGCCCTGCACTTCGTCCACTCGGATGACTGTTTCTCCTCACAAGACCACGGACACACGGCACTCGGACAGACGACTGCCGGCCTCTTTGTCCGCTAGGACGAGGGGCGCCAGGCATGGTTGTTCTCTATCCACCCCACGTTCCTTCCTTTCCAAGTCTCTCTTTCTCAGGAAGTTAGAAACAAGGCTTGGTAGAGCTCTGTCATGAGTTGTGCAGCGACTGGCACAGTTGGTGATTGTTTCAGCTAGCATACAATATAGCACTTCCTGTCCCAAAAATGTACTAAATCTAGATTTGGGTGTGCAGGTGATTGAATGAGAGGGTGTTTGAGGTGAATTGCTAAAGACAATGAACAACACTTAAAGATGTGATCATCTTTAGTGACTCAATTACATCTCGTTATTTAAAAAGGAAATTCCTTGTTTACAATGAGGTAAATAGGCGTCCTCCAGAGATTTGTCTCATTCTTGAATTAGAAGATCTCATCTTCCATGTCTTCTCCAGTGTCACAGCACTATTGTTACAATGGCCCACAGCTATTTCTGATGATCTTATTAGCAAAACAAACCTGCACACACAAAAATCTATGTAAATAGTGTTGAATATTTGAATTATGATTTACTTTTACAAGCACTTTTACACGTGGTTTTTACAAAAAATGTTTGTAATTACGGCCATTTTTTCTACTTCACTGATAAAATGAAACGATGCCACGTGAATGTCATTTTGCATGGGAATTCTGAAGTCATGCATGATTGTGGAGGGATTGCCTTCTACAGCTGAAGCACTTAGTTTATGAGAGCATTCTAGCTTTATTTATAGAAGATTTCACATGCAAGGCTTCCATTTCAGTAACTCACATATTACAAGGTTTATGCAACAATGAACAACAATTaactacaattttttttaaaatggcAACAACATCAGGAAATAAATCACCAAATTAACCACCTCTGAAATGACCCCCTCACTCGCCCTTATTTCAGTGACCTCTGAAATATCACTCCACCAGGAAAAAGAACAACTCAGGGATTGTCTGTTTTTCCATCTGTGCTCGCTTGTTAGCTTGTCAAAATTAGCGCATACATTGGTTGTCATTCATTTGAATTGTTTAACTGTCAACTGTAGTTAAAAAGGGTCCTATCGGATTCCAACAACAGTGGAAGTAAAGTTGTCCAGTGCACAGCTGGAACAAACGACAGGCAACAAAAGAGTGTGAACGACAAACTACACTTACCATGACAACAGTTTACAACCCATGGACTTAACTGTCTCATTCAAAGAACCAAATGGCAGCATTTGTCCAGTTGTTATGTGGAGAggaagggacatcagggttgaaTATCACTTCCTCTAACCTAAGCTGCCTGTGTTGCTGACTTCGGCTGTGTGAAAACGTTACTGACTTTCAAATCCTTGCTTTCTCTGTCCTTGTTTCCTCAATTCCTCTCAAAGCGCATTGCAGgtccagggggaggggggggacctTCGATCTTCTCTAATGCGCTTTGAGAGTTGAGGAAACAAGGACGGAGGAAGCAAGGATTTGACAGATGTTTTCAGACACAGCCCTAGTTGACGCAGTGGGCATTTTGGCATACAGGGGATGGGCAAGGAGAGGTGAAATAATTCCATCTGAGCTTGGAGCGGCCACGGAATCAAGGTTGTAAGAAGCTTTGTGACTCAGCACTTAAATGTACAAAAATAGGACTTAAATATGGCAAAGTGATTGAATAAGAATACACCTTGTCTATTGCAATGATTTACATGTatgtttgtgtcagtgtgtgtatagGGGGCACGTTAAAAATACCCTTTGGTGGTACTTTGTTAGCTTGGGTGAGGACAAGCAATTATCTTTTTTTTAAGGGACTGATTTCATTGTCTTCCCTCTATTTCTTGTTTCTCGAGTATCCGCCCTGTATTCAACCTGTACATGGCAAAAGGTTGATATGCATTGTGTCCTCAATGAGCCTTGTAATAAAAAGAAGGATCTGAATAATATTGTCTGACTGGTTATCTGGGGAATGTAGAAAACATTTTGGTAAAACTGACTAGTCAACGGTCATTTGTAGACACATCCGGTGATAACCATAAATGAATGCATGCATTAATACCTGATTGGGTTTACCATGGCTATTAAAGAAGGAACTACTTTAGGTTTCTCAACATGCAGGGCTAAAATAAAtagctacagtataatcctctgaTCAAAACCAGTCATATTACCTTCCATCTGTGCAAATTGGACCCAATCTTATTTTTCAAAATTGTTTTAAATCTTGACTCAATTTAATCCCAACGGTTCAGACATGCTGAAATGTTTACTCTTCACAAAGTTGTCGAGCAGACCACAGATGGACAAACATCACCCCAAATCTTGTCCttgacattttttattaatttcactttgacatcaGTACAGGGATCACAATGTTTTCAAGCTCCAGAATGTGAACTAGTCATTGAGAACTATCAGATCTGAGATGTTGGTTACCAATACACAGTCAAAAGCAAAACAAAGACTGCCAAAGAGAAAGAAATTCCTTCAAAATCTCCCCCGAAAAAACCCACTCTTGCCACACCACTGCAagaagtttttatttttatataaaataaaaaggcAATGTGTCAAGGAAACTTTTTCAAATGTGCATGTAGATTTATCGTATTTTGCACTAAATAAATCAAGACTAAAGTAAGGTCGTCTGCATTATAATCTATTGAAAACATAGGTAGCATTGCCTTCCTTCAATGACAAAGCGCCCCATGAAAATCCTGACTGTCTGGAACACCTATTCATCGTGAGGTCCTCATCAGGGCTACTGAAGGTTCCTTTCGTCCAGCATCACAAGGACAGTGGTTTACAGACATTGGATACGTTCAACTGTGGGTgggtgaatgtgtgtgagtgaaaaaaaaataaaaaatctagaaCAAAA

Function

NR:

description
uncharacterized protein C11orf95-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578231.2 True 5146 mRNA 0.48 5 53140733 53148064

Neighbor

gene id symbol gene type direction distance location
LOC110500710 LOC106608591 coding downstream 37497 53094313 ~ 53103236 (-)
LOC110500709 LOC106608590 coding downstream 46574 53067865 ~ 53094159 (-)
LOC110500707 LOC106608593 coding downstream 80964 53050824 ~ 53059769 (-)
sf1 LOC106608594 coding downstream 99626 53028579 ~ 53041107 (-)
LOC118943021 NA coding downstream 107896 53032706 ~ 53032837 (-)
LOC110500716 NA coding upstream 13252 53160930 ~ 53164050 (-)
LOC110500888 peli3 coding upstream 222073 53370137 ~ 53405755 (-)
sstr1b sstr1a coding upstream 387549 53535613 ~ 53551723 (-)
LOC110500726 LOC106608579 coding upstream 422101 53570165 ~ 53575953 (-)
LOC110500890 LOC100380644 coding upstream 743419 53891483 ~ 53985179 (-)
G1752123 NA non-coding downstream 97482 53043008 ~ 53043251 (-)
G1752122 NA non-coding downstream 112565 53027966 ~ 53028168 (-)
LOC110500705 NA non-coding downstream 131353 53008693 ~ 53009427 (-)
LOC110500886 LOC106608597 non-coding downstream 143639 52989323 ~ 52997339 (-)
G1752111 NA non-coding downstream 156576 52981286 ~ 52984157 (-)
G1752089 NA non-coding upstream 11610 53159674 ~ 53160072 (-)
G1752191 NA non-coding upstream 112877 53260941 ~ 53261633 (-)
G1752193 NA non-coding upstream 115719 53263783 ~ 53264046 (-)
G1752221 LOC106608584 non-coding upstream 170177 53318241 ~ 53318707 (-)
G1751128 NA other downstream 1012415 52127998 ~ 52128318 (-)
c21h11orf68 cssa07h11orf68 other downstream 1639520 51485700 ~ 51501323 (-)
G1750625 NA other downstream 1903570 51236885 ~ 51237163 (-)
LOC110500668 trmt44 other downstream 2091645 51036609 ~ 51051426 (-)
G1749122 LOC106608652 other downstream 2588208 50542435 ~ 50552525 (-)
G1752268 NA other upstream 270336 53418400 ~ 53419325 (-)
G1752321 LOC103370121 other upstream 354855 53502919 ~ 53505011 (-)
G1753637 NA other upstream 883518 54031582 ~ 54032306 (-)
G1754055 NA other upstream 1695001 54843065 ~ 54849083 (-)

Expression


Co-expression Network