LOC110500754 (LOC106591080)


Basic Information

Item Value
gene id LOC110500754
gene name LOC106591080
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 55590450 ~ 55592100 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956523.1
atgttaacagatccacagatagtGTGGTTGGGGTTGAGAAGTTGCTGgaaaaaatgtccctcattaatCATTATTCTGTTAACAGGATTCTACACACCTTCCTCATGTCTTCATCAGTATCACCTCATTACCATCAATCTGATCTGGACTGATGCCCAGAGTTACTGCAGAGCACATTACACTGATCTGGCTACAGTAGATGACATGGAGGACCAGAACAGGCTGATTACCAGTGTCAGTTTTGATGATTGGTTCTGGATCGGACTGAAAAAGGGAGACTCCATGAAGTGGCACTGGTCTCTGGCAGACAGACGTTTCTACAGAGAGGGGGAAACTGAGTTCAGAAACTGGGACACTGGGACAACCCAAAATGGTAACTGTGTTTTAATGAGTACAGCTGGTCTGTGGAACAACACCTCCTGTGATGACCAGCATCACTTCATCTGTTATGATGTTAAATTAGACTTTTGCAGGAAAACAAGTCACCAACCTAACATACGTCTTAATTCAGGAGAACAAGACACCAACCTAACATACGTCTTAATTCAGGAGAACAGGACCTGGATAGATGCTCAGAGTTACTGCAGACAGCATCACATAGACCTGGTCAGTGTAAGGAACCAGACTGAGAACACAGAGATGAAACAGAAGATATCACTGAGGGGACTTCCTGTGTGGATCGGTCTGTTTCAAGACTCCTGGAGATGGTCAGACCAGAGTGACTCCTCATTTAGAAACGGGACATTAGGACATCCTGATGCTTCAGGACAGAACTGTGTTGCATTGTTTTTTGAATCAGTTAATTCTGCTAAATGGGTAAAACATCCCTGTGACCACAGACATAATTTCATCTGCAATTCTGGTAAATTACAATATTCTCCACTTGATCTACCTGATATAATGATGACATGAGAACTCTAATGTTTCCCCCAAGATTCACCACTTTCATTGTTGGATTTTATTCTCTTGTAGACCCAGATGTGAAGACTACGACTGCTCCTCTGCCCACACCCACAACCACGCCTTCCACCCCGACCACAACCACAACCGTGCCTTCCaccccaacaacaaccacaaccgtGCCTTCCaccctgaccacaaccacaaccatgcCTTCCACCCCAACAACAACCCTGCCTTCCACCCCTTCCACCccgaccacaaccacaaccatgcCTTCCACCCCAACCACAACCGTGCCTTCCaccctgaccacaaccacaaccatgcCTTCCACCCCGACAACAACCATGCCTTCCACCCCGACCACAACCATGCCTTCCACCCCGACCACAACCATGCCTTCCACCccgaccacaaccacaaccacgcCTTCCACCCCGACAACAACGACGCCTTCCACCCTGACAACAACCACAACCATGCCTTCCACCCCGACAACAACCACGCCTTCCACCCCGACCACAACCACGCCTTCCAATCagacaacaaccacaaccacgACTACCAC
>TU2007604
CCAGAGTTACTGCAGAGCACATTACACTGATCTGGCTACAGTAGATGACATGGAGGACCAGAACAGGCTGATTACCAGTGTCAGTTTTGATGATTGGTTCTGGATCGGACTGAAAAAGGGAGACTCCATGAAGTGGCACTGGTCTCTGGCAGACAGACGTTTCTACAGAGAGGGGGAAACTGAGTTCAGAAACTGGGACACTGGGACAACCCAAAATGGTAACTGTGTTTTAATGAGTACAGCTGGTCTGTGGAACAACACCTCCTGTGATGACCAGCATCACTTCATCTGTTATGATGGAAAACAAGTCACCAACCTAACATACGTCTTAATTCAG

Function

NR:

description
PREDICTED: secretory phospholipase A2 receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956523.1 False 1471 mRNA 0.48 2 55590450 55592100
TU2007604 True 337 TUCP 0.46 2 55590605 55591140

Neighbor

gene id symbol gene type direction distance location
LOC118936467 LOC106591080 coding upstream 32548 55516569 ~ 55557902 (+)
LOC110500898 LOC106608541 coding upstream 33795 55542858 ~ 55556655 (+)
LOC118942952 NA coding upstream 77498 55511407 ~ 55512952 (+)
LOC110500897 LOC106591080 coding upstream 85137 55502540 ~ 55505313 (+)
LOC118942951 LOC106608541 coding upstream 111530 55476435 ~ 55478920 (+)
LOC118942793 LOC106608538 coding downstream 234 55592334 ~ 55594662 (+)
LOC110500755 LOC106608544 coding downstream 646429 56238529 ~ 56455028 (+)
LOC118942812 NA coding downstream 1526635 57118735 ~ 57121924 (+)
LOC118942955 NA coding downstream 1619975 57212075 ~ 57232205 (+)
LOC110500761 LOC106608522 coding downstream 2173980 57766080 ~ 57853814 (+)
G1753304 NA non-coding upstream 149696 55440388 ~ 55440754 (+)
G1753303 NA non-coding upstream 153487 55434688 ~ 55436963 (+)
G1753269 NA non-coding upstream 157509 55431631 ~ 55432941 (+)
G1753268 NA non-coding upstream 159144 55430644 ~ 55431306 (+)
G1754413 NA non-coding downstream 6650 55598750 ~ 55598988 (+)
G1754447 NA non-coding downstream 33302 55625402 ~ 55625604 (+)
G1754482 NA non-coding downstream 73447 55665547 ~ 55665750 (+)
G1754601 NA non-coding downstream 180813 55772913 ~ 55773150 (+)
G1754604 NA non-coding downstream 185493 55777593 ~ 55777799 (+)
G1753100 NA other upstream 578772 55001579 ~ 55011678 (+)
LOC110500735 ablim2 other upstream 1282960 54206483 ~ 54342581 (+)
LOC110500722 NA other upstream 2333849 53251413 ~ 53256660 (+)
G1751699 LOC106608599 other upstream 2618067 52962449 ~ 52972383 (+)
G1750050 NA other upstream 3393443 52191200 ~ 52197007 (+)
G1755158 NA other downstream 794307 56386407 ~ 56387622 (+)
G1755570 NA other downstream 1201631 56793731 ~ 56794574 (+)
G1756789 NA other downstream 2334380 57926480 ~ 57928244 (+)
rwdd rwdd4 other downstream 2813184 58405236 ~ 58411726 (+)
G1757578 NA other downstream 3091037 58683137 ~ 58686523 (+)

Expression


Co-expression Network