LOC110500948 (zmynd15)


Basic Information

Item Value
gene id LOC110500948
gene name zmynd15
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 58043656 ~ 58052984 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958278.1
agagaggagagagagacagagacagagatagagagagacagtgatagagagagacagtgagagacggagacagagacaaagacagagagagagagtgtttgggTGACCTGACAGACCTGAGAGTActgagagaataagagagaggtgATTTGTAGTCAACGCACATGGCAACACGACCTGCAGGAGGCAAGCTAAACAGAGTAGTGTTCTCAACAGATTTGTCATTTGTAAAACTAGAAGTCTCCAATAATGATGTTACGGTCCCAAAGGATTACACAGGTATAGTCTTTTACAGCACGTATCTGGTAGTGGGTTATGTTCCCACGCAGCATTGGGCTAGGTTACCACCAGCTGAGACTCTCAGAGAGGTGCCATGCTTAAGAGGCTTTTTACATTAGATTAGTGCTTAGCTCAGCATTACTGAGGCCTGTTGAAACAGATGGCTCAGGTCTTTTGCAAGTCAGCAGGAACCTATTAGCTGGGTTATCAGGTTTCTTTATCACCGTAAATCCCACTTTTTCCCTTCCCCCTTGGTTCTGTGCGGATAGAAGAGCTTTGTTGGCAGACTGTTGTTTTGTTGCTTTCGCCAGCTTCTTTGTGGTTGTCATGACGAAGGATTTGGCTTAAGCAGGAAAAGAGATTGGCATTTGTGGTCATTCGTTACTTTGCAGAGtcagtttttttttatgttgctTGTTGATATACAGGAAGTAGCTATTGTCTGTCTGAGAATGTAAGACTATTTTTGAGGAAGTGTTTACTAACAAGTGTCTCTCTCACATTGTCAAACACGACACTCTCaattcctctgtctttctccctgcaTGTTTTGAACGGCCTCCTTCCCATTTCTTTGTCTGGTTGCTCTTCTGTCATCCGCCCATCTCCTTCCCCTTTCTTTGTCTGGTTGCTGTTCTGTCATCCGTCCATCTCCTGGTCTTTCTTTGTCTGGTTGCTCTTCTGTCATCCGTCCATCTCCTGGTCTTTCTTTGTCTGGTTGCTTTTCTGTCATCCGCCCATCTCCTGGTCTTTCTTTGTCTGGTTGCTTTTCTGTCATCCGCCCATCTCCTGGTCTTTCTTTGTCTGGTTGCTTTTCTGTCATCCGTCCATCTCCTGGTCTTTCTTTGTCTGGTTGCTCTTCTGTCATCCGCCCATCTCCTGGTCTTTCTTTGTCTGGTTGTTTTTCTGTCATCCGTCCATCTCCTGGTCTTTCTTTGTCTCCATTTCCCCAACTCTCTTTCCTTTTTCTATTCCTacactcccccctcccctctctcttttccctctccggTATGTTGTTGTGTCTCTCTCGTCCCATAGTCCACAGTGCAAGGCTGTCCTGTACTGCTCTGACCAGTGTTCCCAGGCAGACCAGATCCGCTGTCCAGAGGATGCCAGTCACCAGCACTGGTGTGAAAAACTGGCCTGCTACATGAGCCACGACTCACAACTTGCCGAGCTGCCATTCAGCTATGCCGCAGAGGTGACAGCTGTTGATTTCGACCTGGAACACTTCCTGAATAAGAATAAACTGGACAGTGGCTACTGGGTACACTGGAGCCTCTTGGTACGCTCCCCCAGATATGAGCTCCATCCCACAGTGGAACAGTCCAGAGATCAATACCCCCACTGGTTCACAGGTCACAGTGAGCCCTTTGGACCCCTGAAAAGGGAGGGAGACATCCTGCTCTGTAGCCCAGCTCCTCATGCAGTCCCCAGCGTCACCAAACCGCTGGtgttgTGGAGTCAGTACTGTGAGTGGAGGGGTATCAGTCTGTCCTCTCCTGCAGCTGTTCTTCTCAGCTCCCCTCTATCCATCTACTACATAATCACGTCGCTGGTGCCCCaagactTTCCAGAGCTCAACATCCAGAAGAAGCAGTCTCTAAAGATCCACATCATCGACTCCTACAGGGAGTTCCACTGTCTCAAGGTGTTCTGGGAATTGTCTGTTCTCCTGCCGCACATGACCTTTGAACTGGTGTTCATAGGGGAGGGACTTCCCCCTGAGAGTGACGAGGAGCAGATCTTTCTGCAGAAGAAGAACGGCCGTGTCCACCTGGTTAACCCCAGCTTCACCCCGGATGAGAAGTTGGACAGGAGGAGCATCCGGGTAAAAGGTTACCGCAGGGCCTATCACATGCTGCAAGGGCCCAAACCTGACCTGGTGATTGGCTTCAGACCGGCAATCCTGCTTCAGGAGTCGTGGCTCAGCACACTCCCTAggctccagTCCCTGAGGGTTCCAGCCTACTTCTGTGAGGTCGGGGAGTTGAGCTGTGTGTGCAGCCAGCAGGTGATGAGCCAGGCCACCGGGGGCACCCTCTCCCCTCCACACATCAACCCCTTCCACTGCCCCCTGCGCATCACTGGAGGAGATAACATGCTGCCCTGgtATTCAAATGCCTTCATCTTCCATCTGAGGTACAAGCCCGTGCATAGTGAGAAACGACCTTCTGTGGCCTACCCCAAAGCCCCGCCTTTGCAGGTAGAGCCGGCCAATCAGGAACCTGACTACCCTGTGAAGATGAGTCGCAGGGACAGGAAGCAGGCCGCCCGCAATATGCCCCGCAAACGCAAATGATGAtaacaacatgcacacacacgtacgcactcAAACACAAACGTatacacactggcacacacacacactggcacacacacacacacacacactggcacacacacacacacacactggcacacacacacacacacactggcacacacacacacccacactatggcgcacacacacacacacacacactggcacacacacacacacacacacacaggcgcgtgCGTACACAAGGTTACTCTCAATGAACAGACTCAGGGCAGACTAACACTTTAGCTGAACTGGCCTTTTCATTAAAAAAGACCAGTCATAGACTCTTCAGTGATTGCCGTGCCAGTTTGTCTGTGGGTTTTACATTCCCAATAGTTTGTATATCAACCCCCTAAGGGTCCCTTTCCTTCTATAAGATATTGTAGTCTACTGTTAACCACGTGACTGGTAAGATGACTTATTATGTAGGCTAGAGTTTGTGTGGCTGTGAAATTCTTTATCTTGTACAGACAGAGATattagaggggagggagagagaagagatt

Function

symbol description
zmynd15 Predicted to enable histone deacetylase binding activity. Predicted to be involved in negative regulation of transcription, DNA-templated and spermatid development. Predicted to be located in cytoplasm and nucleus. Implicated in spermatogenic failure 14.

NR:

description
PREDICTED: zinc finger MYND domain-containing protein 15 isoform X1

GO: NA

KEGG:

id description
K24081 ZMYND15; zinc finger MYND domain-containing protein 15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958278.1 True 3117 mRNA 0.50 10 58043656 58052984

Neighbor

gene id symbol gene type direction distance location
paqr9 paqr9 coding downstream 3293 58036498 ~ 58040363 (-)
LOC118942957 NA coding downstream 7713 58029260 ~ 58035943 (-)
rell1 LOC106608524 coding downstream 84360 57904754 ~ 57959296 (-)
zmp:0000000660 arap2 coding downstream 506872 57279508 ~ 57536784 (-)
LOC118942954 NA coding downstream 1750981 56291672 ~ 56292747 (-)
LOC110500947 zmynd15 coding upstream 141 58053125 ~ 58056083 (-)
LOC110500946 fbxo24 coding upstream 3563 58056547 ~ 58068333 (-)
adam19a LOC106608525 coding upstream 116207 58169191 ~ 58391025 (-)
LOC118942959 NA coding upstream 142276 58195260 ~ 58198250 (-)
LOC118942958 NA coding upstream 319166 58372150 ~ 58378475 (-)
G1757130 NA non-coding downstream 599 58042650 ~ 58043057 (-)
G1757127 NA non-coding downstream 18195 58023747 ~ 58025461 (-)
G1757123 NA non-coding downstream 25298 58017511 ~ 58018358 (-)
G1757116 NA non-coding downstream 40831 58002393 ~ 58002825 (-)
G1757162 NA non-coding upstream 50842 58103826 ~ 58104805 (-)
G1757169 NA non-coding upstream 57331 58110315 ~ 58111026 (-)
G1757139 NA non-coding upstream 126927 58179911 ~ 58180455 (-)
G1757217 NA non-coding upstream 197705 58250689 ~ 58254043 (-)
G1757235 NA non-coding upstream 240001 58292985 ~ 58293391 (-)
G1757074 NA other downstream 134522 57908139 ~ 57909134 (-)
G1757073 NA other downstream 141063 57902086 ~ 57902593 (-)
G1755322 NA other downstream 1636338 56406582 ~ 56407318 (-)
G1755310 NA other downstream 1653090 56390057 ~ 56390566 (-)
G1757692 NA other upstream 747190 58800174 ~ 58805825 (-)
G1758095 NA other upstream 1139448 59192432 ~ 59195490 (-)
G1758845 NA other upstream 1970783 60023767 ~ 60024903 (-)
G1758890 NA other upstream 2069558 60122542 ~ 60123364 (-)
G1758915 NA other upstream 2135426 60188410 ~ 60225587 (-)

Expression


Co-expression Network