LOC110500947 (zmynd15)


Basic Information

Item Value
gene id LOC110500947
gene name zmynd15
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 58053125 ~ 58056083 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578452.2
GTAGGTTAGGaaaattaggttaaggttaggaaagggTTTTGGGTTAGCTAAAATACTCTCCTAACCTGTTACGAAAAGTATCTGTACTCCCCCAGTGTCACAACCCTGAATCACATTACCGCTTAAGGGCAGAAATCTAGTACAACACCACCAACTAGCGGTGATTTATTTAATAGCGCTTCGTAGAAAATATTGATTAATTGATCATGTTTGATAAGGCCTGACGTAAAGATTGTTTTGAGGATAGACGAAATGTTTTGTAATCAAATGGATTGTTCGATCATTAAAATATTTGCTGTAGGCTAGAGAAATAAAAATAGACTGACCATTTTTTGCGGGACACATGGTGTTCCTTTTTGGAATCCTCATCCCGTAAAACAATGACGCCTTTGCTTTCGAAAAACAACATATTTTGTCGcatgtttattttcatttttcaAATTCCTCAAAGCAACCTAGGCTACAGGTGACAGAAGGCCTTTTCCAACCAAAGAACGAACAGATTTAAGCGAAAAATATAGCCCTACTCAAGATGGAGTTAGTGTCAGGTTACCGTGACCGGATGATTGAGTTCTCGGAGGCTATGGCACAGTGGTATCGCTGCTTCCAGACCACCCGTAGGGGGCGCAAAGAACCACATAGTGATTTCTGGGGGTACGATTTTCCCCGATACCACATGGACCGCTCACCGTACTGGATACTGCACCTGCTGGATTGCGCTGCAACGCCACCTGCAGCTATTCCACGGCTAGAACAGACTGGATTGGACCCCTCCGAGCTCAtaAGTAGTGAAGGAGATAGTGTTCTGATGGTGACTGATGCCTCTGGCCTGCCCCTGGGCTTTGACGTGCTGGCCGGTGGCTGGGCAGGGGCGCTGGGTGGGGGCGAGGCTGCGGGTGGAGATGGGAAGGGGGCCCTGGAGACAATCCAGAAGATGGTAGGACTGCTGAGACGCTGCATGGAGGCCCCTATGACTGGCGGGTTGCCTCGGAGACCACACATGCTCCACGTCAATGACAAGAAGCTTCACAGgTTGCTGAGTAGGTGTGAGAAGGCCCTCACCATTCTGAAGGTGGTTCTGTGGCCCCAGGCCCTGGGTGACTGGGGCCTCACAGAGGTGGAGCAGGTGGACGGAGGAGAGTCCTTCAGCATGCGCTGGCCTCCGACCTGCTACTGTCACGTGTGTAAGAAACACTCCTTCCCCAGTCAGCTGAAACCATGGTAaggcgaggagagggagagagagacagagagagacatacagacagagagagagagagacagacagac

Function

symbol description
zmynd15 Predicted to enable histone deacetylase binding activity. Predicted to be involved in negative regulation of transcription, DNA-templated and spermatid development. Predicted to be located in cytoplasm and nucleus. Implicated in spermatogenic failure 14.

NR:

description
zinc finger MYND domain-containing protein 15-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578452.2 True 1290 mRNA 0.49 4 58053125 58056083

Neighbor

gene id symbol gene type direction distance location
LOC110500948 zmynd15 coding downstream 141 58043656 ~ 58052984 (-)
paqr9 paqr9 coding downstream 12762 58036498 ~ 58040363 (-)
LOC118942957 NA coding downstream 17182 58029260 ~ 58035943 (-)
rell1 LOC106608524 coding downstream 93829 57904754 ~ 57959296 (-)
zmp:0000000660 arap2 coding downstream 516341 57279508 ~ 57536784 (-)
LOC110500946 fbxo24 coding upstream 464 58056547 ~ 58068333 (-)
adam19a LOC106608525 coding upstream 113108 58169191 ~ 58391025 (-)
LOC118942959 NA coding upstream 139177 58195260 ~ 58198250 (-)
LOC118942958 NA coding upstream 316067 58372150 ~ 58378475 (-)
LOC110500784 ing2 coding upstream 385084 58441167 ~ 58443946 (-)
G1757130 NA non-coding downstream 10068 58042650 ~ 58043057 (-)
G1757127 NA non-coding downstream 27664 58023747 ~ 58025461 (-)
G1757123 NA non-coding downstream 34767 58017511 ~ 58018358 (-)
G1757116 NA non-coding downstream 50300 58002393 ~ 58002825 (-)
G1757162 NA non-coding upstream 47743 58103826 ~ 58104805 (-)
G1757169 NA non-coding upstream 54232 58110315 ~ 58111026 (-)
G1757139 NA non-coding upstream 123828 58179911 ~ 58180455 (-)
G1757217 NA non-coding upstream 194606 58250689 ~ 58254043 (-)
G1757235 NA non-coding upstream 236902 58292985 ~ 58293391 (-)
G1757074 NA other downstream 143991 57908139 ~ 57909134 (-)
G1757073 NA other downstream 150532 57902086 ~ 57902593 (-)
G1755322 NA other downstream 1645807 56406582 ~ 56407318 (-)
G1755310 NA other downstream 1662559 56390057 ~ 56390566 (-)
G1757692 NA other upstream 744091 58800174 ~ 58805825 (-)
G1758095 NA other upstream 1136349 59192432 ~ 59195490 (-)
G1758845 NA other upstream 1967684 60023767 ~ 60024903 (-)
G1758890 NA other upstream 2066459 60122542 ~ 60123364 (-)
G1758915 NA other upstream 2132327 60188410 ~ 60225587 (-)

Expression


Co-expression Network