Item | Value |
---|---|
gene id | elavl2 |
gene name | elavl2 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 58851083 ~ 58904451 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
elavl2 | Enables mRNA 3'-UTR binding activity. Predicted to be part of ribonucleoprotein complex. Is expressed in central nervous system; head; ovary; and primordial germ cell. Orthologous to human ELAVL2 (ELAV like RNA binding protein 2). |
description |
---|
ELAV-like protein 2 isoform X1 |
id | name | namespace |
---|---|---|
GO:0000166 | nucleotide binding | molecular_function |
GO:0003723 | RNA binding | molecular_function |
id | description |
---|---|
K13208 | ELAVL2_3_4; ELAV like protein 2/3/4 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036958292.1 | False | 2455 | mRNA | 0.41 | 8 | 58851083 | 58904451 |
XM_036958293.1 | False | 2401 | mRNA | 0.41 | 7 | 58851085 | 58904451 |
XM_036958290.1 | False | 2491 | mRNA | 0.42 | 8 | 58851086 | 58904451 |
XM_036958291.1 | False | 2208 | mRNA | 0.43 | 8 | 58853303 | 58904451 |
XM_036958294.1 | True | 2111 | mRNA | 0.43 | 7 | 58853309 | 58904451 |
58,840,000
58,850,000
58,860,000
58,870,000
58,880,000
58,890,000
58,890,000
58,900,000
58,910,000
58,920,000
58,930,000
58,940,000
NC_048585.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110500780 | caap1 | coding | upstream | 327453 | 58512708 ~ 58523630 (+) |
si:ch211-212k18.7 | cd68 | coding | upstream | 386899 | 58456696 ~ 58464184 (+) |
LOC110500903 | LOC106608527 | coding | upstream | 409812 | 58411942 ~ 58441271 (+) |
rwdd | rwdd4 | coding | upstream | 439357 | 58405236 ~ 58411726 (+) |
lrch4 | lrch4 | coding | upstream | 709965 | 58084350 ~ 58141118 (+) |
LOC110500773 | LOC106608508 | coding | downstream | 439157 | 59343608 ~ 59348145 (+) |
LOC110500769 | LOC106608502 | coding | downstream | 559142 | 59463593 ~ 59514503 (+) |
LOC118942960 | NA | coding | downstream | 589038 | 59493489 ~ 59498544 (+) |
trnar-ucu-10 | NA | coding | downstream | 611970 | 59516421 ~ 59516493 (+) |
trnar-ucu-11 | NA | coding | downstream | 612475 | 59516926 ~ 59516998 (+) |
G1757723 | NA | non-coding | upstream | 25774 | 58825105 ~ 58825309 (+) |
G1757720 | NA | non-coding | upstream | 27678 | 58823014 ~ 58823405 (+) |
G1757608 | NA | non-coding | upstream | 143639 | 58707205 ~ 58707444 (+) |
G1757581 | NA | non-coding | upstream | 158903 | 58690697 ~ 58692180 (+) |
G1757574 | NA | non-coding | upstream | 176692 | 58673958 ~ 58674391 (+) |
G1757813 | NA | non-coding | downstream | 17180 | 58921631 ~ 58922153 (+) |
G1757941 | NA | non-coding | downstream | 268410 | 59172861 ~ 59178684 (+) |
G1757943 | NA | non-coding | downstream | 269231 | 59173682 ~ 59174262 (+) |
G1757945 | NA | non-coding | downstream | 282883 | 59187334 ~ 59188240 (+) |
G1757957 | NA | non-coding | downstream | 299921 | 59204372 ~ 59205129 (+) |
G1757578 | NA | other | upstream | 164560 | 58683137 ~ 58686523 (+) |
G1756789 | NA | other | upstream | 922839 | 57926480 ~ 57928244 (+) |
G1755570 | NA | other | upstream | 2056509 | 56793731 ~ 56794574 (+) |
G1755158 | NA | other | upstream | 2463461 | 56386407 ~ 56387622 (+) |
G1758801 | NA | other | downstream | 1417764 | 60322215 ~ 60326620 (+) |
G1758818 | NA | other | downstream | 1447195 | 60351646 ~ 60353092 (+) |
G1758786 | NA | other | downstream | 1454379 | 60358349 ~ 60359351 (+) |
G1759168 | LOC101154678 | other | downstream | 1817707 | 60722158 ~ 60722472 (+) |
G1759267 | NA | other | downstream | 1905751 | 60810202 ~ 60810620 (+) |