dctn6 (LOC106608510)


Basic Information

Item Value
gene id dctn6
gene name LOC106608510
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59454715 ~ 59460683 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578303.2
CCTTAGACCATGCTGTAGTTGTTGAAATGTCGTTGGTTACGATGGTTCTAAGTATTTTGATGAAAGCTTAgtcaacaaaaaacagaaaacatatCAACAAGATTGCAGCCATTTGTCGTTAATGTGTGTTTATTTTTAGAATCTAAAATAGACAGGAATCTTATAATTACACACAGGAATCTTTttcctatttattttattttcataactatagagtaccacagtaagAGTCATAGTACACATAAAAATTAGCGGTCAAACATGGACATGGTTCCAATTGTCTTTCCACCATACATTTTTTTTCCATAGGGGATTTTTAGAAATACTTAAagtaagggctgtgtttcgtgtaggcttaccttgGCATGATGtttaaatctctctaggacaagttgacttttatcaatatattcacctgtaTTTACCACCCAAAAATGTAATGCTAATTGGtggctaatgtggctatcataacgaactacaaatgccatgatgaccTGGTCGAGACTGCCGAACCGATGCAAAGTGCCAACATTGCAGCTGGAGCAgttgtgtgtgtagagagtgaaATTAGAGGAGATGTGACCATTGGTCCAAGAACAGTGGTCCACCCGAAAGCACGTATTATAGCTGAGGCAGGCCCTATTATCATTGGAGAAGGCAACCTGATTGAGGAACAGGCTCTCATCATTAACAGTTATCCAGAAAATATTATGCCTGACACTGAAGGAGTTGAACCCAAGACCATGACGATTGGAATCAACAATGTGTTTGAAGTCGGTTGCGTCTCTCAAGCATTGAAAATTGGTGACAACAATGTCATCGAGTCAAAAGcGGACCTAGGGAAGAACGTCATTCTCACCAGTGGCTGTATCGTCGGCGCTTGTTGCCAGGTTAATACGTGTGAGGTCATTCCCGAGAACACAGTCATCTACGGGTCTAACTGCATGAGGCGTGTGCAGACAGAAAGGCCTCAGCCTCAGACGCTTCAGCTAGATTTCCTCATGAAGATCCTGCCCAACTACCATCACATGAAGAAGACTGTCAAAGGAACCTCCACCCCTGTCAGAAATTAACCTCTGACTAACCAAAGATCAGCGTTCTCTGACGCTCACCAGACCTTAACAATGAAAGGTGTAGAGACTAAATGTATCCTAGACCTGATGTCCTACAGCTATTGTCCTAGACCACGTAAGAAGTCGTTTCTCTCCTCTGAGGCATGAGTGCACATTCCTAGCTTTTCTCAATTCCCAATCATAAGAGAGAGAGCCCatatgcagcactccattggGTCATTAGCTAAACCAATAGTAATGCAGTTCCTGGTTTTGTTTCTTATTTGTCTATCTTGCACCTTTTTATtgtatcattttttatttttttgtctgtTCAACTGTCATATGTTGTTTTTCTGTCTTAAATTTAGCCGATTCAGTTATGTTAATGTATATTTTTCAGCTTTGGTTgttgtgaaataaaaatatatttaaaagaaACA
>XM_021578302.2
GTAGAGAGGTAGAATTGCGGTATCCAGACATCAACAATCAACCAAGACTGTTTTTTCCCCCCCCCCAAGAATCATAATCAACTGTCGATAGTATCTTCTTCTCTGTCAGGATGGCGGACCCCAACACTAAACAGATGCCACAGAAAAGTGCCAACATTGCAGCTGGAGCAgttgtgtgtgtagagagtgaaATTAGAGGAGATGTGACCATTGGTCCAAGAACAGTGGTCCACCCGAAAGCACGTATTATAGCTGAGGCAGGCCCTATTATCATTGGAGAAGGCAACCTGATTGAGGAACAGGCTCTCATCATTAACAGTTATCCAGAAAATATTATGCCTGACACTGAAGGAGTTGAACCCAAGACCATGACGATTGGAATCAACAATGTGTTTGAAGTCGGTTGCGTCTCTCAAGCATTGAAAATTGGTGACAACAATGTCATCGAGTCAAAAGcGGACCTAGGGAAGAACGTCATTCTCACCAGTGGCTGTATCGTCGGCGCTTGTTGCCAGGTTAATACGTGTGAGGTCATTCCCGAGAACACAGTCATCTACGGGTCTAACTGCATGAGGCGTGTGCAGACAGAAAGGCCTCAGCCTCAGACGCTTCAGCTAGATTTCCTCATGAAGATCCTGCCCAACTACCATCACATGAAGAAGACTGTCAAAGGAACCTCCACCCCTGTCAGAAATTAACCTCTGACTAACCAAAGATCAGCGTTCTCTGACGCTCACCAGACCTTAACAATGAAAGGTGTAGAGACTAAATGTATCCTAGACCTGATGTCCTACAGCTATTGTCCTAGACCACGTAAGAAGTCGTTTCTCTCCTCTGAGGCATGAGTGCACATTCCTAGCTTTTCTCAATTCCCAATCATAAGAGAGAGAGCCCatatgcagcactccattggGTCATTAGCTAAACCAATAGTAATGCAGTTCCTGGTTTTGTTTCTTATTTGTCTATCTTGCACCTTTTTATtgtatcattttttatttttttgtctgtTCAACTGTCATATGTTGTTTTTCTGTCTTAAATTTAGCCGATTCAGTTATGTTAATGTATATTTTTCAGCTTTGGTTgttgtgaaataaaaatatatttaaaagaaACA

Function

NR:

description
dynactin subunit 6 isoform X1

GO: NA

KEGG:

id description
K10428 DCTN6; dynactin 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578303.2 False 1495 mRNA 0.40 7 59454715 59459893
XM_021578302.2 True 1120 mRNA 0.43 7 59454715 59460683

Neighbor

gene id symbol gene type direction distance location
LOC110500772 rbpms coding downstream 14171 59375396 ~ 59440544 (-)
LOC110500775 dmrta1 coding downstream 170590 59282169 ~ 59284125 (-)
LOC110500776 glu2b coding downstream 174053 58961261 ~ 59280662 (-)
LOC110500778 LOC106608531 coding downstream 942315 58508576 ~ 58512400 (-)
LOC110500779 LOC106608532 coding downstream 946235 58499259 ~ 58508480 (-)
trnay-gua-65 NA coding upstream 139838 59600521 ~ 59600607 (-)
trnay-gua-66 NA coding upstream 140516 59601199 ~ 59601285 (-)
trnay-gua-67 NA coding upstream 141192 59601875 ~ 59601961 (-)
trnay-gua-68 NA coding upstream 141870 59602553 ~ 59602639 (-)
trnay-gua-69 NA coding upstream 142549 59603232 ~ 59603318 (-)
G1758317 NA non-coding downstream 23958 59429126 ~ 59430757 (-)
G1758314 NA non-coding downstream 29700 59423685 ~ 59425015 (-)
G1758294 NA non-coding downstream 66743 59383531 ~ 59387972 (-)
G1758203 NA non-coding downstream 99517 59354356 ~ 59355198 (-)
G1758201 NA non-coding downstream 100566 59352809 ~ 59354149 (-)
G1758362 NA non-coding upstream 53931 59514614 ~ 59514862 (-)
G1758364 NA non-coding upstream 55579 59516262 ~ 59533218 (-)
G1758417 NA non-coding upstream 151985 59612668 ~ 59651669 (-)
G1758424 NA non-coding upstream 158545 59619228 ~ 59622300 (-)
G1758428 NA non-coding upstream 173900 59634583 ~ 59637718 (-)
G1758095 NA other downstream 259225 59192432 ~ 59195490 (-)
G1757692 NA other downstream 648890 58800174 ~ 58805825 (-)
G1757130 NA other downstream 1411658 58042650 ~ 58043057 (-)
G1757074 NA other downstream 1545581 57908139 ~ 57909134 (-)
G1757073 NA other downstream 1552122 57902086 ~ 57902593 (-)
G1758845 NA other upstream 563084 60023767 ~ 60024903 (-)
G1758890 NA other upstream 661859 60122542 ~ 60123364 (-)
G1758915 NA other upstream 727727 60188410 ~ 60225587 (-)
LOC118942962 LOC106608456 other upstream 898147 60352810 ~ 60370197 (-)
G1759103 NA other upstream 1067704 60528387 ~ 60528790 (-)

Expression


Co-expression Network