trnar-ucu-117



Basic Information


Item Value
gene id trnar-ucu-117
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59727056 ~ 59727128 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnar-ucu-117
accccagtggcctaatggataaggcactggccttctaagccagggattgtgggtttgagtcccatctggggtg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnar-ucu-117 True 73 mRNA 0.56 1 59727056 59727128

Neighbor


gene id symbol gene type direction distance location
trnar-ucu-116 NA coding downstream 277 59726707 ~ 59726779 (-)
trnar-ucu-115 NA coding downstream 17708 59709276 ~ 59709348 (-)
trnar-ucu-114 NA coding downstream 18716 59708268 ~ 59708340 (-)
trnar-ucu-113 NA coding downstream 19719 59707265 ~ 59707337 (-)
trnar-ucu-112 NA coding downstream 20722 59706262 ~ 59706334 (-)
trnar-ucu-118 NA coding upstream 1628 59728756 ~ 59728828 (-)
trnar-ucu-119 NA coding upstream 2979 59730107 ~ 59730179 (-)
trnar-ucu-120 NA coding upstream 10119 59737141 ~ 59737451 (-)
LOC110500793 LOC106608484 coding upstream 20376 59747504 ~ 59756919 (-)
mfsd8 mfsd8 coding upstream 137583 59864711 ~ 59880547 (-)
G1758445 NA non-coding downstream 23045 59699294 ~ 59704011 (-)
G1758412 NA non-coding downstream 41723 59674010 ~ 59685333 (-)
G1758417 NA non-coding downstream 75387 59612668 ~ 59651669 (-)
G1758587 NA non-coding upstream 134829 59861957 ~ 59862860 (-)
G1758592 NA non-coding upstream 154199 59881327 ~ 59881710 (-)
G1758594 NA non-coding upstream 158140 59885268 ~ 59885664 (-)
G1758602 NA non-coding upstream 185821 59912949 ~ 59913181 (-)
G1758095 NA other downstream 531566 59192432 ~ 59195490 (-)
G1757692 NA other downstream 921231 58800174 ~ 58805825 (-)
G1757130 NA other downstream 1683999 58042650 ~ 58043057 (-)
G1757074 NA other downstream 1817922 57908139 ~ 57909134 (-)
G1757073 NA other downstream 1824463 57902086 ~ 57902593 (-)
G1758845 NA other upstream 296639 60023767 ~ 60024903 (-)
G1758890 NA other upstream 395414 60122542 ~ 60123364 (-)
G1758915 NA other upstream 461282 60188410 ~ 60225587 (-)
LOC118942962 LOC106608456 other upstream 631702 60352810 ~ 60370197 (-)
G1759103 NA other upstream 801259 60528387 ~ 60528790 (-)

Expression



Co-expression Network