camta2 (camta2)


Basic Information

Item Value
gene id camta2
gene name camta2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 63434675 ~ 63562110 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956534.1
ccacatatctctctctctctctctccctatctctctctctctctctacggagTGACGTCGGTGTTAAGAAGAAGATGGCGGCGCCAGGAAAGGCGGAAGGTGtatcgCAGTGTGGACCTCTgtggtgtgtgagttgtgtgtagTGCCGCTGGTTGGAGTGAGTCGTCTAGTCATCATGAacaataaggagagagagagcacaaaagAGTCAGaGAACAGCCGAGGCCAGATGAAGGTGTTTCTGCCTAACAAGTTGTTGGAGCGTCTCCCTCAAACCACCTCCCTACCCAAGGAGAGACTACGATGGAACACCAACGAGGAGATTGCATCCTACTTGATCACATTTGACAGACATGAAGAGTGGCTATCCTGCTCGCTCAAGACCAGGCCCCAGAATGGCAGCATCTTCCTGTATAACAGGAAGAAGATCAAGTACAGGAAGGACGGCTACTGCTGGAAAAAGAGGAAAGATGGGAAGACCACCAGAGAAGACCACATGAAGCTCAAAGTACAGGGCATAGAGtgtctcTATGGTTGCTACGTCCATTCTTCCATCGTCCCAACATTCCACAGGAGGTGCTACTGGCTGTTGCAGaacccAGACATGGTGCTGGTTCACTACCTGAATGTTCCGTCGCTGGAGGATCATGGGAAGGCGTGCGGCCCGTTGCTATGTGCCGTTGCCGACCGCCGAGACTCATTACGCTGGAGCCGAGACGAACTACTGGCCCAGCTCAAGCCTATGTtCCACAGCATTAAGTGGTCATGTGGAGAAGGTTATGGATCATCAGAGTTCTCTATAGAACAACTGGCTCAACAGATCCTGGAGTCTCAACAGACCAAACCTCAGCCtcgcacacacacctgtctctgcAGCTCCACACTGGCGTCTCCTGGAGCTAACATTCCCCACCGCTGTAACAGCACCAAACATCGCATTATCTCCCCCAAACTGCCCGCTACCAGCCCTGCCATGTCAGCCTCACCCCTGgctgagggggagacaggagggggaGACATCCCTGCAGGCGGCGAGAATaaacctcccccacacacacaccctccccccccacacacacaccctcccccctcacacacacaccctcccccctcacacacacactcccaggtaAAGCTTGGAGGGTCTACCAGCCTGGTAGGGAGACATGAGGGagtctcttcctccccctctcccccctcctcctcctcctcctcctcatcatccccCCCTCAGGCTCACCGCACAGCAACCATCGCCGTCAGCAACGGCACCACCAACAgtttctatggtgaccagcgGGGCCTGACGACGGTTGCCCTACCGCAGAATGCGGTGATCGTCATGACTACGGCGGGGGTCATCGGGACGCAGGGTGGAGGAGAGCGGGAGTCGAGTCTGTCTCTTACCCGTTCAGGTCAGCTGGTACTCTCCCCCGTCCCCCCTAAACCagacaccccctcccccccaacccCACCTGCTCcacccaccccctccccccccacccccgggGTGGCTACTCTCAGCCTCACCCTCCTGTCCTCACCCGTTATAGGGGGAATACTCctcactccatccccctctccatccctcctgcaccctctccctcctgccgccccctctccctcaccctgccaACCTCCTGTCTTCGATCCAGACTCCTTTCTGAACAGTCCTAAACAGGGTCAGACCTACGGAGgcactctccccccctcctcaccctctcctcccccctcctcctcctccccacatgcaccctccctcactctctccctctcccccacgtCCCCTCCCCCCTGctcatcccctccctcctctctctcatccctctcttctgagGCAGAGAGGAAGAATGAAGAGAGAGTGGTGCTCCAGACCTCTGccccttcttcctccctccctccaaccctttctctatccctctctccgtcccACTCTGCCCCTTcttcctcactccctccatccctttctctatccctctctccgtcccACTCTatcccttcttcctccctcccttcctccctccctccatccctttctctatccctctctccgtcccACTCCGccccttcttcctccctccctccatccctttctctatccctctctccgtcccactccgccccctctctcctgcctctgtgTCTGGAATCAGCGCTGGCCCTCGGCCCtctgggggagacagagggggagaggggggaggcagatggagaaagagaaagacagagggaggaggggagagaagaggggcacCCGCCCACCAAACTGGCTCTCCTCCAGCGAAGCCAATCCCCCAAGCCGTCGCCGTCAGGGCAACACCACAGAAAAGCATCATCATCGCTGCTCCTGATTCGCCACGAAACGCAGCAGACCCCTCCCACTCAGCAGATGGCGCCCAATCTGCAGCCTCACAGGCAGGACGGAGAGCAGCCATTGGTCGTCCTAGAGCCCAAAGAGCTCCAGCAGCACCTCCCCCAACCCATGACCTCTATGCACTGTAACCCCAACCCCACCCCGACCCCGACCCCACTGACCCTGACCCAGAACCACCACTCTCAACTCCTCCTGCTGCAACACAGACGTCTtcagagtcaggagagagagatggagaaagaggtggaaagagagaggcagagggaggtggaaagggagagggggaggcagctCTTACTCCTGCACCAGAGACTCAGCCAGCCGACTCCCTTAGAGTCCCTGTTTGCTAACATCAACAACGTGGCTAATGCAAACATGGCTCTTTCAACTACTGTTAATATGGACAGTGCCAATGCCACTATGAGTAATGTTAACATGACCAATATGGCTAATGGGCGGGTTagagtaaaggaggagagggggcggGGCTACGAGGCAGAGGACACACCCATGGACACGGGTCAAAGGTCGGAGGTAACGGATGTCTCGGAGGAGCTAGAGATATCGTTCGACAGCCAGTTCCCTGACCTCATCTCTGAGCTCATCACAGAGGCCGacgcccccaacacacacacacacacacacacctcggtcCTCGTCCCAAACCCGGCTCCCACCAGCCTGTTCCCTACGGGGGTACGTTACATGGTTCCTCCCcagccctccccctcctcctccttcctccccttcccccctcttccccctaaCAACGGGACTGAGCTACAACGCCTAGCAACCATCACAGACTTCTCCCCCGAGTGGTCCTACCCAGAgGGTGGTGTGAAGGTGTTGATAACAGGTCCCTGGTTGGAGGCTACTGGACGTTACAGCTGCGTGTTTGACCAGAGCACCGTCCCCGCTTCACTTATTCAGCCTGGAGTACTACGGAGCTACTGCCCTGCCCACGAGGCAGGGTTGGTGTCTCTTCATATAGTGGAGGACAGTGGGTCTGTCTCTTCGTCTGTTCTGTTTGAATACAGAGCTAGAAACGCCTCGTCTCTACCCAGCTCACAGCTGGACTGGCTGTCCCTGGACGatAACCAGTTCCGTATGTCCATCCTGGACAGACTGGAgcagatggagaggaggatggctgAGATGTCTGcaaccaacccacacacacagccgccGCCACAATGCCAGCGGATCAGCACACTCTccccacacacacctctgcccGAGGACAGAAGCCAGtcaggcCCATGGTTTGAGAGGAGGATAGTTGGAGTATGtgagaggatgatggagggagggaggtggagaggaggaggagaagagcgcCTCGCTCACTCCATACGCCACAGAGGGATGACACTGCTCCACCTGGCCGCTGCACAGGGATACACACACCTCATCAACACACTCATCCACTGGAGGAGTGTCAACAGTGACAGTCTGGACGTAGAGCAGGAAGTTGATCCTCTCACCGTCGATCATTTCTCATGCACTCCTCTGATGTGGGCGTGTGCTCTGGGACACCAGGCAGCAGCCGAGGTTCTATATGGTTGGAACAGCCAGGCGCTCGGAATTCCCGACTCACTAGGCCGCCTCCCCCTCGCAGTTGCACGCTCTCGCGGACACACATGCCTCGCCCGCGCGCTGGaggacctacacacacaccgccccgacacgcacacacccacagagagggCCGAGGAGGGGGCTCAGGGGGAGCAGAGGACCACCCCCACTCCACAACTCCCCCCCTCTCCACTGTCCACCAGTCCTGACACAGgtcTGAGTTCGTCCAGTAgtattccctccccctctctctccctcccctccccctctctcagctcAGCCTACTCTAGTGGGTCTgtacccctctacaaccctcctGACCCTATGgatacctccccctcctccccctctctctccctgtcctccctccccctctcccctccctccccctctctctccctccctctgagcCTGCCGGTATGGGGCGAGGCCTGTGGAGGTTGTGAAGCTGGGGACTCTAGTTTGAACGCCGGGCCCAGAGACCCTCTCTTCCTCATGGACTACGAACCGGcccctccccactcccctcccggacctccacactcacacacacccccccgtcgctcacacacacccccccgtcgctcacacacacacaccttcgagGAGCAGGTGAGCTTCAATGAGAATGCAGAGAACGAGGAGGAGTTCCTGCCTGCTGAGGTGctacagGTTGACATGGCAACGTTAGCAGAGCAGATCATCGAGGCGACTCCTGAGCGAATCAAACAAGAGGAATTGTCCAGGGGGGCGGAGTCACCGCTCAGAGAGAGGCGGGACAACACGGTGATATCCGATACCATGCCCTGGTTGGCCACTTACctggacactcacacacactcctctctgtccagATGTGTGTaccccccctcccacctcagTACCCTGGCCCTCCAGAGGCTGCGGCCCCCCAGTAGTGTGGCGTGGGCGGAGTTCCTGAACGCCTCGGCCaatgggaggatggagagagacttTGCTCTGCTGACTCTGACTGACTCTGAGCAGAGAGAACTGTACGAGGCTGCGCGCATCATTCAGAACGCCTTCAGACGATACAAGGGTCGGAGGTTGAAGGAACAGCAGGACATGGCAGCAGCCGTCATCCAACGATGCTACAGGAAGTACAAGCAGCTAACATGGATAGCTCTGAAGtatGCTCTGTATAAAAGGATGACTCAGGCAGCGATACTGATCCAGTCTAAGTTCCGTAGTTACTATGAGCAGAAGAAATTCCAGCAGTCTAGACGGGCTGCGGTTCTGATCCAACAGTACTACCGCAGCTATAAGGAGTATGAACGCCTCAAACAGGGACCCAGAGGGTCCGGATCACACAATCCAAAACTGAAGGGTTCCTTCCTGACTAAGAAGCAGGACCAGGCCGCTAGGAAGATCATGAGATTCCTACGACGATGCCGACACCGGATTAAAGAGTTGAAACAGACTaaggagttagagaggagagggctTACCACCTAACTCCTCTTTTACCCCTCCTTCATCCTGCCATCCGCCACGGGAGAGAGGGATGactgatggagaagagagagcagcCTGTCTGCCCTCCTCCCTttattctctgtctccctccctccactgggGTCGCTCATCACCCCATCCAGCTGTATGCCtctgtcactcctcctctcctcctgttctcctcgcctcctcctgtactcctccctttattctctgtctccctccctccactgggGTCGCTCATCACCCCATCCAGCTGTATGCCTCtgtcactcctcctctcatcctcctgtcctcctctcctccccctgttctcctctcctccccctgttctcCTCATCtcatcctcctgttctcctctcctccccctgttctcctctcctcctctca
>TU2017685
TCGGTGTTAAGAAGAAGATGGCGGCGCCAGGAAAGGCGGAAGGTGtatcgCAGTGTGGACCTCTgtggtgtgtgagttgtgtgtagTGCCGCTGGTTGGAGTGAGTCGTCTAGTCATCATGAacaataaggagagagagagcacaaaagAGTCAGaGAACAGCCGAGGCCAGATGAAGGTGTTTCTGCCTAACAAGTTGTTGGAGCGTCTCCCTCAAACCACCTCCCTACCCAAGGAGAGACTACGATGGAACACCAACGAGGAGATTGCATCCTACTTGATCACATTTGACAGACATGAAGAGTGGCTATCCTGCTCGCTCAAGACCAGGCCCCAGAATGGCAGCATCTTCCTGTATAACAGGAAGAAGATCAAGTACAGGAAGGACGGCTACTGCTGGAAAAAGAGGAAAGATGGGAAGACCACCAGAGAAGACCACATGAAGCTCAAAGTACAGGGCATAGAGtgtctcTATGGTTGCTACGTCCATTCTTCCATCGTCCCAACATTCCACAGGAGGTGCTACTGGCTGTTGCAGaacccAGACATGGTGCTGGTTCACTACCTGAATGTTCCGTCGCTGGAGGATCATGGGAAGGCGTGCGGCCCGTTGCTATGTGCCGTTGCCGACCGCCGAGACTCATTACGCTGGAGCCGAGACGAACTACTGGCCCAGCTCAAGCCTATGTtCCACAGCATTAAGTGGTCATGTGGAGAAGGTTATGGATCATCAGAGTTCTCTATAGAACAACTGGCTCAACAGATCCTGGAGTCTCAACAGACCAAACCTCAGCCtcgcacacacacctgtctctgcAGCTCCACACTGGCGTCTCCTGGAGCTAACATTCCCCACCGCTGTAACAGCACCAAACATCGCATTATCTCCCCCAAACTGCCCGCTACCAGCCCTGCCATGTCAGCCTCACCCCTGgctgagggggagacaggagggggaGACATCCCTGCAGGCGGCGAGAATaaacctcc

Function

symbol description
camta2 Predicted to enable DNA binding activity. Predicted to act upstream of or within regulation of transcription by RNA polymerase II. Orthologous to human CAMTA2 (calmodulin binding transcription activator 2).

NR:

description
PREDICTED: calmodulin-binding transcription activator 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956534.1 False 5818 mRNA 0.58 24 63434675 63562110
TU2017685 True 990 TUCP 0.53 9 63521606 63562053

Neighbor

gene id symbol gene type direction distance location
LOC118942977 NA coding downstream 119694 63312403 ~ 63314981 (-)
LOC110500810 NA coding downstream 189171 63241114 ~ 63245504 (-)
asgrl2 LOC106591604 coding downstream 495170 62921176 ~ 62939505 (-)
LOC110500819 LOC106608419 coding downstream 580569 62813988 ~ 62854106 (-)
trnah-gug-110 NA coding downstream 688004 62746600 ~ 62746671 (-)
si:ch1073-157b13.1 LOC106608406 coding upstream 16812 63578922 ~ 63607637 (-)
LOC118942979 NA coding upstream 64229 63542492 ~ 63629859 (-)
LOC110498011 LOC106608403 coding upstream 261100 63823210 ~ 63832447 (-)
LOC118942816 LOC106608393 coding upstream 525076 64087186 ~ 64089298 (-)
LOC110510319 NA coding upstream 538322 64100432 ~ 64124819 (-)
G1761467 NA non-coding downstream 190 63431910 ~ 63434485 (-)
G1761487 NA non-coding downstream 4103 63430352 ~ 63430572 (-)
G1761486 NA non-coding downstream 4558 63428942 ~ 63430117 (-)
G1761483 NA non-coding downstream 10767 63423244 ~ 63423908 (-)
G1761479 NA non-coding downstream 15632 63416555 ~ 63419043 (-)
G1761562 NA non-coding upstream 57916 63620026 ~ 63620817 (-)
G1761583 NA non-coding upstream 107409 63669519 ~ 63669746 (-)
G1761587 NA non-coding upstream 118307 63680417 ~ 63680669 (-)
G1761602 NA non-coding upstream 182657 63744767 ~ 63745990 (-)
G1761302 NA other downstream 381012 63050472 ~ 63053663 (-)
G1761295 NA other downstream 424015 63010187 ~ 63010660 (-)
G1760327 NA other downstream 1115171 62318535 ~ 62319504 (-)
G1760325 NA other downstream 1126449 62305638 ~ 62311438 (-)
LOC110517683 LOC106592125 other upstream 643267 64205352 ~ 64223639 (-)
G1761826 NA other upstream 855200 64417310 ~ 64418052 (-)
LOC110509409 LOC106593257 other upstream 1028497 64590607 ~ 64647805 (-)
G1762080 NA other upstream 1186394 64748504 ~ 64749274 (-)
G1761519 NA non-coding downstream 7192 63510507 ~ 63514414 (-)
G1761517 NA non-coding downstream 12804 63508050 ~ 63508802 (-)
G1761513 NA non-coding downstream 17987 63502987 ~ 63503619 (-)
G1761508 NA non-coding downstream 23188 63497745 ~ 63498418 (-)
G1761507 NA non-coding downstream 24092 63496166 ~ 63497514 (-)

Expression


Co-expression Network