corin (corin)


Basic Information

Item Value
gene id corin
gene name corin
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 64237532 ~ 64381441 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958423.1
GTCTGGGTAATGATAGGGCGGTAGAGGTTCTGCCTGGAGTCTTTCCCCTGGAGTCTCCCAGAGCAGCACTAGGCTACTGGAGATTTACCGTCTACCGTACGGGACAGAGATGAGTGTGAGGTGAGGGTAAAGAGGCAGGCATCATGTTACCATCTCGAGACATCACGGTCCCTCACGTCACCTTCAGCGGCACCGAGgttgctGATGAGGACATGACCATGGGTGAAGTGTGTCCTCAGAAGAGGACCTCGACAAAGAACTATATTCgtcttctcctcctcatcctcgtcCCTGTTGTCAGCCTGCTAACCTGTCTACTGCTGGTTCTACTGGCCttctcaggaATCTTTGGGAATGTTTTCTTTATGGGAGTAGAGTCAGGAGAGTCGGACCCACTCTTCGGCACGGCGTACCCTGTCTCCACGGACACTCCGTTCACCGCTATCGGGACCTCTCCCGTTAACCCTAACGTGACCAGACCTGCCAGGACAGCGACCGCAGACCGACCCGACCATGAACACAACCTCAAACCAACTGGAACTCACTATATTCCACACACGGGCACTACTGTCACAcactcctcttcatcctcttcttaCTTCTCTTCCACAACTCCTCCCACCGTGGTTCACACAGACCCTCGTGATTGGGTGACCTCTATGACATCACTGGGCACCTCCTTGCCAATCAGCACCACCCAAGATCCTTCGAGTCCCGCCTCCAACCAAgaCTGTGTCCTGATCTCAGAAGCCCAGTGCACCATGCTTCCCTATAACCAGACGTCTCAGTCACCAGGGCTAGCGGTGGTGAGGGCCTCGGAGGTTGACATGTTTCTCAAGTTTTTTTCCTATTTACACCGGCTCGGCTGCTACAGACACATCATGTTGTTCGGCTGCACGCTTGCTCTACCAGAATGCATCACTCCACGCCACGGACAACCCAgacgTGTCGTCCTACCCTGTCAGTCGTTCTGTGAGTCGGCCAGAGAGGGCTGTGGACCTGTCCTCCAGCTGTTCAATGCATCATGGCCTGACTTCCTGCGATGCTCCCAGTTCACCAACAACACTTCCGGGTTGCCAGGGTTGTCGTCCATGGCAATGCAAGCCGAGTCGGGGGTCAGCCCAGGTACAGGGGTTAACTCCGCACTCCTCAGCCCCAACTCCATCCCTTCCAGCTGCTACTCTCCCAGACAGGTCAAAGGCAAACCATCTGTCTGTGGAGGACACGACCACTTCCTATGTGTGACTGGACTATGTATCCCCAGGAAACTTGTTTGTAACGGATATAACGACTGTGATGACTGGAGTGATGAGGCAGAGTGCGTGTGTGGAGAAGAGGAGTTTAGGTGCGGGACGGGACGCTGTGTGTCCCCTTCTATGGTGTGTGATGGATACGATGACTGTGGAGATCTCAGCGACGAACACAGCTGTGtgtgtgaccCAGTCAGGGAACACCGCTGTGAGGATGGGAGATGTGTTACCAGGGACTGGGTGTGTGATGGAGATCATGACTGTCTGGACAAGAGCGACGAACTAAACTGCTCCTGTAAATCCCAGGGTCTGTTGGAATGCAGGAATGGTCTGTGTGTTCCTAGTGCCTTCAGATGTGATGGAGAGGATGACTGCAAGGATGGCAGTGATGAGGAAAACTGTACTCAACTACATATTCAGGGTGCGTGTCCTCCTGGCCAGCCCAGCTGTCCCTCTACTCCCAGCACGTGTGATGCCCGTAACAACTGcaGTCATTGTGAGCCCATTACTTTAGAGCTGTGTATGAACTTGCCCTACAACAGCACCACCTACCCTAACTACCTTGGCCACGCGACCCAGAGCGAGAGCTCTGTCTCCTGGGAGTCTTCTCTGTTCCCAGCCCTGGTTCAGACCAACTGTTATAAATACCTCATGTTCTTCGCCTGTACCATGTTGGTCCCCAAgtgtgactcacacacacaccagagggtGCCCCCCTGCAGGTCATTGTGTCGGAGCTCTAAGGAGCGCTGTGAGTCTGTGCTGGGTATTGTGGGTCTTCAATGGCCGGAGGACACAGACTGTAACCAGTTCCCCGAAGACGGACCCACCTGTCTCCTACCTAACCCGGATGTTGACGAGTGTTCTCCCAGTCACTTCAAATGTCGGTCCGGGAGGTGTGTCCTGTCCTCTAAGCGCTGTGATGGACACATGGACTGTGATGATGACAGTGACGAAGACAACTGTGgttgtgTGGAGCGAGGTCTGTGGGAGTGCCCAGGTACCAGGCTGTGTATTAAACACTCTATGATCTGTGACGGCTTCCCAGACTGCCCTCTACTGAAAGATGAGAACAACTGCTctgtaTGCAAGGACAACGAGCTAGCCTGTAGTAACCACCAGTGTGTTCACCGGACTCTGTGGTGTGATGGGACAAAACACTGTTCAGACAGCTCTGATGAGTGGGACTGTGTCTCTCTGTCGGAGGGGTCGCTAGTGACCGTCTTCAGGACAGCAGTAGATTACCATGTCTGTGGGGATGACTGGACGATGGACCTCAGTCAACTGACCTGCTCTCAGCTCGGCCTAGGAGCCCCAGCATCAGTAATTCTGGTTCCAGACCCTCCCAGTGttccagggaggaggaggtggcttCATGTTCACCCTGACTGGAGACAGAGGAACGGCTCAGCTCTACAGGGCCTACTGGAGAAGAGAGGacatGCCTGTTTCTCCAGGAAGAGAGTGTCTCTACACTGCACCAAAGAAGactGTGGCCTGCGCCCGGCCGTGCGTCTGTATAAGCGTATTCTGGGTGGCAGGGTGTCCAGGCCAGGGAGGTGGCCTTGGCAGTGTTCTCTCCAATCAGATCCTAGTGGACATATCTGTGGTTGCGTCCTCATTGGGAAGAAATGGGCCCTTACTGTCGCTCACTGCTTTGAAGGaCGTGAGAGTGCAGACCTATGGAAGGTAGTCTTGGGCATCAACAACCTGGACCACCCGTCCCCGTACCTGCAGACCAGAGGTGTAGAGTCCATCATTGTTCACCCTCGCTATAACCGGGCCGTGGTCGACTATGACATCAGCGTGGTTGAGCTGGACAGGGAGGTGGAGGTTACCAGTTACGTTCGACCGGTGTGTCTTCCCGGTAACGGACAGTTACCGCAGCCTGATACCTACTGTTATATTACTGGATGGGGTCACATGGGTAACAGGATGCCCTTCAAACTCCAGGAGGGAGAAGTAAGGATCATCAGTCTGTCTCAGTGTCAGAGTTACTTTGATATGAAGACCATCACCACCAGGATGCTTTGTGCTGGATACGAGGCTGGCACCGTGGACTCTTGCATGgGTGACAGTGGTGGTCCTCTGGTGTGTGAGGAGCCTAGTGGTGGGAGCTGGACCCTGTATGGCCTGACGTCCTGGGGTAGCGTGTGTTTCTCCAAAGTCCTGGGTCCTGGGGTCTACTCTAATGTTACACACTTCACACCCTGGATACACCGACAGATCTACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTCCACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCCCCACACCTTCCATCTCCACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATAGAGACAGACCTCCACACCTTCCATTTACACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATAGAGACAGACCTCCACACCTTCCATCATCACTGATACAGACAGACCTCCACACCTTCCATCTCCACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATAGAGACAGACCTCCACACCTTCCATCATCACTGATACAGACAGACCTCCACACCTTCCATCTCCACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATAGAGACAGACCTCCACACCTTCCATCATCACTGATACAGACAGACCTCCACACCTTCAATCTCCACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTCCACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTCCACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCAATCTCCACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTCCACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACCTTCAATCTCCACTGATACAGACAGACCTCCACACCTTCCATCTACACTGATACAGACAGACCTCCACACcttccatctacactgat
>TU2018137
GGAGTCTCCCAGAGCAGCACTAGGCTACTGGAGATTTACCGTCTACCGTACGGGACAGAGATGAGTGTGAGGTGAGGGTAAAGAGGCAGGCATCATGTTACCATCTCGAGACATCACGGTCCCTCACGTCACCTTCAGCGGCACCGAGgttgctGATGAGGACATGACCATGGGTGAAGTGTGTCCTCAGAAGAGGACCTCGACAAAGAACTATATTCgtcttctcctcctcatcctcgtcCCTGTTGTCAGCCTGCTAACCTGTCTACTGCTGGTTCTACTGGCCttctcaggtacacacacatacacacaccacacacatacacacaccacttcTCCCTGACCATCACAAcgtctctccacttctccctgaCCATCACAAcgtctctccacttctccctgaCCATCACAAcgtctctccacttctccctgaCCATCACAAcgtctctctacttctccctgtCCATCACAAcgtctctccacttctccctgaCCATCACAAcgtctctctacttctccctgaCCATCACAAcgtctctccacttctccctgaCCATCACAAcgtctctccacttctccctgaCCATCACAAcgtctctccacttctccctgaCCATCAAAACGTAcgtctctccacttctccctgaCCATCAAAACGTAcgtctctccacttctccctgaCCATCACAAcgtctctccacttctccctgaCCATCACAAAGTCtgtctctccacttctccctgaCCATCAAAACGTAcgtctctccacttctccctgaCCATCACACcgtctctccacttctccctgaCCATCACACcgtctctccacttctccctgaCCATCACAAcgtctctctacttctccctgaCCATCACAAcgtctctctacttctccctgaCCATCACAAcgtctctctacttctccctgaCCATCACAAcgtctctccacttctccctgaCCATCACAACGTCTCTCCACTTCTTCCTGACCACCACAAcgtctctctacttctccctgaCCATCACAAcgtctctccacttctccctgaCCATCACAAcgtctctccacttctccctgaCCATCACAAcgtctctctacttctccctgaCCATAACAAcgtctctctacttctccctgaCCATCACAACGTAcgtctctccacttctccctgaCCATCACAAcgtctctccacttctccctgaCCATCACAAcgtctctccacttctccctgaCCATCACAAcgtctctctacttctccctgaCCATCACAAcgtctctccacttctccctgaCCATCACAAcgtctctctacttctccctgaCCATCACAAcgtctctccacttctccctgaCCATCACAAcgtctctctacttctccctgaCCATGAATGTATTTGTTTTGTATgtgtcctttatttaactaagttcattaagaacacattcttatttaaagTGAcgtccccggccaaacccggacgacactgcggccaattgtgtgccaccctatggggaatccaaatcacggccggttgtgatacagcctggaatcgaaccagggtctctagtgacacctctagcactgagatgcagtgtcctaGACAGCAGTGTCTTAGacagccactcgggagcccaaatgaCATATCTCTCTTCGATTCTCCCTGACCATCacaacgtacagtaccagtcaaaagtttagacaccttctcattccagggtttttctttattttgactattttctacattgtagaataatagtgaagacatcaacaatatgaaataacatatggaatcatgtagtaaccaaaaaaaatgtcaaagtagtcaccctttgccttgatgacg

Function

symbol description
corin Predicted to enable scavenger receptor activity and serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in plasma membrane. Human ortholog(s) of this gene implicated in hypertension and pre-eclampsia. Orthologous to human CORIN (corin, serine peptidase).

NR:

description
PREDICTED: histidine-rich glycoprotein-like

GO:

id name namespace
GO:0006898 receptor-mediated endocytosis biological_process
GO:0006508 proteolysis biological_process
GO:0016020 membrane cellular_component
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0005044 scavenger receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958423.1 False 4837 mRNA 0.53 22 64237532 64381441
TU2018137 True 1845 lncRNA 0.50 2 64348759 64381392

Neighbor

gene id symbol gene type direction distance location
LOC110517683 LOC106592125 coding downstream 13893 64205352 ~ 64223639 (-)
LOC110509411 LOC106562799 coding downstream 61100 64148054 ~ 64176432 (-)
LOC110510319 NA coding downstream 112713 64100432 ~ 64124819 (-)
LOC118942816 LOC106608393 coding downstream 148234 64087186 ~ 64089298 (-)
LOC110498011 LOC106608403 coding downstream 405085 63823210 ~ 63832447 (-)
nfxl1 nfxl1 coding upstream 3475 64384916 ~ 64480987 (-)
LOC118942981 NA coding upstream 5120 64386561 ~ 64387808 (-)
cnga1b cnga1 coding upstream 102081 64483522 ~ 64518038 (-)
LOC118942817 LOC106608410 coding upstream 144456 64525897 ~ 64533370 (-)
LOC110509409 LOC106593257 coding upstream 210315 64590607 ~ 64647805 (-)
G1761766 NA non-coding downstream 1079 64233966 ~ 64236453 (-)
G1761772 NA non-coding downstream 28316 64206960 ~ 64209216 (-)
G1761754 NA non-coding downstream 54584 64179410 ~ 64182948 (-)
G1761753 NA non-coding downstream 55860 64180705 ~ 64181672 (-)
G1761733 NA non-coding downstream 123060 64111526 ~ 64114472 (-)
G1761818 NA non-coding upstream 18065 64399506 ~ 64400164 (-)
G1761822 NA non-coding upstream 24430 64405871 ~ 64406337 (-)
G1761830 NA non-coding upstream 45533 64426974 ~ 64430355 (-)
G1761796 NA non-coding upstream 80564 64462005 ~ 64463656 (-)
G1761930 NA non-coding upstream 120587 64502028 ~ 64516323 (-)
LOC118942979 NA other downstream 607685 63542492 ~ 63629859 (-)
camta2 camta2 other downstream 675479 63434675 ~ 63562110 (-)
G1761302 NA other downstream 1183869 63050472 ~ 63053663 (-)
G1761826 NA other upstream 35869 64417310 ~ 64418052 (-)
G1762080 NA other upstream 367063 64748504 ~ 64749274 (-)
G1762085 NA other upstream 372266 64753707 ~ 64754499 (-)
G1762162 NA other upstream 475067 64856508 ~ 64857185 (-)
G1761792 NA non-coding downstream 30542 64317834 ~ 64318217 (-)
G1761790 NA non-coding downstream 34381 64313774 ~ 64314378 (-)
G1761783 NA non-coding downstream 64909 64281450 ~ 64283850 (-)

Expression


Co-expression Network